RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 STRN4Q9NRL3 753 aa12.92□□□□□ -0.34
BRCC3-207ENST00000411985 A0A0G2JS52 829 aa12.91□□□□□ -0.34
BRCC3-207ENST00000411985 MYT1Q01538 1121 aa12.91□□□□□ -0.34
BRCC3-207ENST00000411985 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
BRCC3-207ENST00000411985 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
BRCC3-207ENST00000411985 RGPD2P0DJD1 1756 aa12.91□□□□□ -0.34
BRCC3-207ENST00000411985 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
BRCC3-207ENST00000411985 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 TMF1P82094 1093 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 USP31Q70CQ4 1352 aa12.9□□□□□ -0.34
BRCC3-207ENST00000411985 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
BRCC3-207ENST00000411985 EVA1CP58658 441 aa12.89□□□□□ -0.35
BRCC3-207ENST00000411985 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
BRCC3-207ENST00000411985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
BRCC3-207ENST00000411985 CRB1P82279 1406 aa12.88□□□□□ -0.35
BRCC3-207ENST00000411985 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
BRCC3-207ENST00000411985 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
BRCC3-207ENST00000411985 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
BRCC3-207ENST00000411985 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
BRCC3-207ENST00000411985 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
BRCC3-207ENST00000411985 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
BRCC3-207ENST00000411985 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
BRCC3-207ENST00000411985 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
BRCC3-207ENST00000411985 PEAK1Q9H792 1746 aa12.87□□□□□ -0.35
BRCC3-207ENST00000411985 SOX12O15370 315 aa12.86□□□□□ -0.35
BRCC3-207ENST00000411985 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
BRCC3-207ENST00000411985 NME9Q86XW9 330 aa12.86□□□□□ -0.35
BRCC3-207ENST00000411985 CDCA8Q53HL2 280 aa12.85□□□□□ -0.35
BRCC3-207ENST00000411985 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
BRCC3-207ENST00000411985 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
BRCC3-207ENST00000411985 THRAP3Q9Y2W1 955 aaKnown RBP12.85□□□□□ -0.35
BRCC3-207ENST00000411985 RREB1Q92766 1687 aa12.84□□□□□ -0.35
BRCC3-207ENST00000411985 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
BRCC3-207ENST00000411985 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
BRCC3-207ENST00000411985 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
BRCC3-207ENST00000411985 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
BRCC3-207ENST00000411985 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
BRCC3-207ENST00000411985 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
BRCC3-207ENST00000411985 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
BRCC3-207ENST00000411985 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
BRCC3-207ENST00000411985 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
BRCC3-207ENST00000411985 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
BRCC3-207ENST00000411985 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
BRCC3-207ENST00000411985 CSB-PGBD3P0DP91 1061 aa12.79□□□□□ -0.36
BRCC3-207ENST00000411985 EIF4G2P78344 907 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRCC3-207ENST00000411985 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
BRCC3-207ENST00000411985 COG3Q96JB2 828 aa12.79□□□□□ -0.36
BRCC3-207ENST00000411985 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
BRCC3-207ENST00000411985 ERBB3P21860 1342 aa12.78□□□□□ -0.36
BRCC3-207ENST00000411985 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
BRCC3-207ENST00000411985 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
BRCC3-207ENST00000411985 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
BRCC3-207ENST00000411985 HSPA5P11021 654 aaKnown RBP12.77□□□□□ -0.37
BRCC3-207ENST00000411985 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
BRCC3-207ENST00000411985 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
BRCC3-207ENST00000411985 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
BRCC3-207ENST00000411985 CARD10Q9BWT7 1032 aa12.77□□□□□ -0.37
BRCC3-207ENST00000411985 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
BRCC3-207ENST00000411985 FYB1O15117 783 aa12.76□□□□□ -0.37
BRCC3-207ENST00000411985 BAG6P46379 1132 aa12.76□□□□□ -0.37
BRCC3-207ENST00000411985 DDB1Q16531 1140 aa12.76□□□□□ -0.37
BRCC3-207ENST00000411985 CDCA7Q9BWT1 371 aaPredicted RBP12.76□□□□□ -0.37
BRCC3-207ENST00000411985 BTAF1O14981 1849 aa12.76□□□□□ -0.37
BRCC3-207ENST00000411985 RTL1A6NKG5 1358 aa12.75□□□□□ -0.37
BRCC3-207ENST00000411985 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
BRCC3-207ENST00000411985 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
BRCC3-207ENST00000411985 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
BRCC3-207ENST00000411985 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
BRCC3-207ENST00000411985 TRIM37O94972 964 aa12.74□□□□□ -0.37
BRCC3-207ENST00000411985 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
BRCC3-207ENST00000411985 IP6K1Q92551 441 aa12.74□□□□□ -0.37
BRCC3-207ENST00000411985 POLR3GLQ9BT43 218 aa12.74□□□□□ -0.37
BRCC3-207ENST00000411985 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
BRCC3-207ENST00000411985 CARD14Q9BXL6 1004 aa12.73□□□□□ -0.37
BRCC3-207ENST00000411985 HOXC9P31274 260 aa12.72□□□□□ -0.37
BRCC3-207ENST00000411985 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
BRCC3-207ENST00000411985 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
BRCC3-207ENST00000411985 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.37
BRCC3-207ENST00000411985 LRP5O75197 1615 aa12.71□□□□□ -0.37
BRCC3-207ENST00000411985 FBLN1P23142 703 aa12.71□□□□□ -0.37
BRCC3-207ENST00000411985 AMPHP49418 695 aa12.71□□□□□ -0.37
BRCC3-207ENST00000411985 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
BRCC3-207ENST00000411985 ITGB4P16144 1822 aa12.71□□□□□ -0.38
BRCC3-207ENST00000411985 VIRMAQ69YN4 1812 aaKnown RBP12.71□□□□□ -0.38
BRCC3-207ENST00000411985 BCL9O00512 1426 aa12.71□□□□□ -0.38
BRCC3-207ENST00000411985 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.38
BRCC3-207ENST00000411985 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
BRCC3-207ENST00000411985 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
BRCC3-207ENST00000411985 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
BRCC3-207ENST00000411985 EXOC5O00471 708 aa12.7□□□□□ -0.38
BRCC3-207ENST00000411985 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
BRCC3-207ENST00000411985 FLT4P35916 1363 aa12.69□□□□□ -0.38
BRCC3-207ENST00000411985 APBA3O96018 575 aa12.69□□□□□ -0.38
BRCC3-207ENST00000411985 IL2RBP14784 551 aa12.69□□□□□ -0.38
BRCC3-207ENST00000411985 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
BRCC3-207ENST00000411985 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms