RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
RNU6-248P-201ENST00000410720 GDPD2Q9HCC8 539 aa7.88□□□□□ -1.15
RNU6-248P-201ENST00000410720 MAP4K5Q9Y4K4 846 aa7.88□□□□□ -1.15
RNU6-248P-201ENST00000410720 SOCS7O14512 581 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 TIMP2P16035 220 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 CCDC116Q8IYX3 515 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 ITPKCQ96DU7 683 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 ATP13A2Q9NQ11 1180 aa7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 CDV3Q9UKY7 258 aaKnown RBP7.87□□□□□ -1.15
RNU6-248P-201ENST00000410720 NR1H3Q13133 447 aa7.86□□□□□ -1.15
RNU6-248P-201ENST00000410720 ZNF775Q96BV0 537 aaPredicted RBP7.86□□□□□ -1.15
RNU6-248P-201ENST00000410720 GMPR2Q9P2T1 348 aaKnown RBP7.86□□□□□ -1.15
RNU6-248P-201ENST00000410720 ZNF330Q9Y3S2 320 aaPredicted RBP7.86□□□□□ -1.15
RNU6-248P-201ENST00000410720 GPR37L1O60883 481 aa7.84□□□□□ -1.15
RNU6-248P-201ENST00000410720 INTS6LQ5JSJ4 861 aaKnown RBP7.84□□□□□ -1.15
RNU6-248P-201ENST00000410720 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
RNU6-248P-201ENST00000410720 EMILIN1Q9Y6C2 1016 aa7.84□□□□□ -1.15
RNU6-248P-201ENST00000410720 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
RNU6-248P-201ENST00000410720 UBTFP17480 764 aaKnown RBP7.83□□□□□ -1.16
RNU6-248P-201ENST00000410720 VAC14Q08AM6 782 aa7.83□□□□□ -1.16
RNU6-248P-201ENST00000410720 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
RNU6-248P-201ENST00000410720 DHX9Q08211 1270 aaKnown RBP7.82□□□□□ -1.16
RNU6-248P-201ENST00000410720 FLIIQ13045 1269 aa7.82□□□□□ -1.16
RNU6-248P-201ENST00000410720 C6orf118Q5T5N4 469 aa7.82□□□□□ -1.16
RNU6-248P-201ENST00000410720 PURBQ96QR8 312 aaKnown RBP7.82□□□□□ -1.16
RNU6-248P-201ENST00000410720 RAD21O60216 631 aa7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 GIGYF1O75420 1035 aaPredicted RBP7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 UPP2O95045 317 aa7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 POM121Q96HA1 1249 aa7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 KLF16Q9BXK1 252 aaPredicted RBP7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 TMPRSS4Q9NRS4 437 aa7.81□□□□□ -1.16
RNU6-248P-201ENST00000410720 CBLBQ13191 982 aa7.8□□□□□ -1.16
RNU6-248P-201ENST00000410720 IRF5Q13568 498 aa7.8□□□□□ -1.16
RNU6-248P-201ENST00000410720 SCARF1Q14162 830 aa7.8□□□□□ -1.16
RNU6-248P-201ENST00000410720 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
RNU6-248P-201ENST00000410720 SENP2Q9HC62 589 aa7.8□□□□□ -1.16
RNU6-248P-201ENST00000410720 COG6Q9Y2V7 657 aa7.8□□□□□ -1.16
RNU6-248P-201ENST00000410720 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
RNU6-248P-201ENST00000410720 BMP2P12643 396 aa7.79□□□□□ -1.16
RNU6-248P-201ENST00000410720 EIF4G2P78344 907 aaKnown RBP eCLIP7.79□□□□□ -1.16
RNU6-248P-201ENST00000410720 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
RNU6-248P-201ENST00000410720 ZFP42Q96MM3 310 aa7.79□□□□□ -1.16
RNU6-248P-201ENST00000410720 SNRPBP14678 240 aaKnown RBP7.78□□□□□ -1.16
RNU6-248P-201ENST00000410720 WWC1Q8IX03 1113 aa7.78□□□□□ -1.16
RNU6-248P-201ENST00000410720 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
RNU6-248P-201ENST00000410720 ZNF784Q8NCA9 323 aaPredicted RBP7.78□□□□□ -1.16
RNU6-248P-201ENST00000410720 CYLDQ9NQC7 956 aa7.78□□□□□ -1.16
RNU6-248P-201ENST00000410720 ESPNB1AK53 854 aa7.77□□□□□ -1.17
RNU6-248P-201ENST00000410720 MEIOBQ8N635 442 aa7.77□□□□□ -1.17
RNU6-248P-201ENST00000410720 KIFC2Q96AC6 838 aa7.77□□□□□ -1.17
RNU6-248P-201ENST00000410720 TRIM47Q96LD4 638 aa7.77□□□□□ -1.17
RNU6-248P-201ENST00000410720 MCCD1P59942 119 aaPredicted RBP7.76□□□□□ -1.17
RNU6-248P-201ENST00000410720 RELBQ01201 579 aa7.76□□□□□ -1.17
RNU6-248P-201ENST00000410720 WASHC4Q2M389 1173 aa7.76□□□□□ -1.17
RNU6-248P-201ENST00000410720 RNF20Q5VTR2 975 aa7.76□□□□□ -1.17
RNU6-248P-201ENST00000410720 SEPT12Q8IYM1 358 aa7.76□□□□□ -1.17
RNU6-248P-201ENST00000410720 AGBL1Q96MI9 1066 aa7.76□□□□□ -1.17
RNU6-248P-201ENST00000410720 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
RNU6-248P-201ENST00000410720 CLUAP1Q96AJ1 413 aa7.75□□□□□ -1.17
RNU6-248P-201ENST00000410720 ESF1Q9H501 851 aaKnown RBP7.75□□□□□ -1.17
RNU6-248P-201ENST00000410720 PCDHB11Q9Y5F2 797 aa7.75□□□□□ -1.17
RNU6-248P-201ENST00000410720 TSEN34Q9BSV6 310 aaKnown RBP7.74□□□□□ -1.17
RNU6-248P-201ENST00000410720 CEP126Q9P2H0 1117 aa7.74□□□□□ -1.17
RNU6-248P-201ENST00000410720 SOBPA7XYQ1 873 aa7.73□□□□□ -1.17
RNU6-248P-201ENST00000410720 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
RNU6-248P-201ENST00000410720 ZNF395Q9H8N7 513 aaPredicted RBP7.73□□□□□ -1.17
RNU6-248P-201ENST00000410720 MAN1A2O60476 641 aa7.72□□□□□ -1.17
RNU6-248P-201ENST00000410720 ADD1P35611 737 aaKnown RBP7.72□□□□□ -1.17
RNU6-248P-201ENST00000410720 Q6ZVU0 165 aa7.72□□□□□ -1.17
RNU6-248P-201ENST00000410720 LILRA1O75019 489 aa7.71□□□□□ -1.18
RNU6-248P-201ENST00000410720 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
RNU6-248P-201ENST00000410720 RNF135Q8IUD6 432 aa7.71□□□□□ -1.18
RNU6-248P-201ENST00000410720 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
RNU6-248P-201ENST00000410720 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
RNU6-248P-201ENST00000410720 ADH1AP07327 375 aa7.7□□□□□ -1.18
RNU6-248P-201ENST00000410720 SCTRP47872 440 aa7.7□□□□□ -1.18
RNU6-248P-201ENST00000410720 CC2D2BQ6DHV5 1058 aa7.7□□□□□ -1.18
RNU6-248P-201ENST00000410720 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
RNU6-248P-201ENST00000410720 DOLKQ9UPQ8 538 aa7.7□□□□□ -1.18
RNU6-248P-201ENST00000410720 FIGNL2A6NMB9 653 aa7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 TTLL8A6PVC2 850 aa7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 POM121CA8CG34 1229 aa7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 ATP5J2-PTCD1G3V325 749 aa7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 INSM2Q96T92 566 aaPredicted RBP7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
RNU6-248P-201ENST00000410720 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
RNU6-248P-201ENST00000410720 SOX11P35716 441 aa7.68□□□□□ -1.18
RNU6-248P-201ENST00000410720 ERVK-9P63128 1117 aa7.68□□□□□ -1.18
RNU6-248P-201ENST00000410720 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
RNU6-248P-201ENST00000410720 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
RNU6-248P-201ENST00000410720 CCDC125Q86Z20 511 aa7.68□□□□□ -1.18
RNU6-248P-201ENST00000410720 MEN1O00255 615 aa7.67□□□□□ -1.18
RNU6-248P-201ENST00000410720 SPINT1O43278 529 aa7.67□□□□□ -1.18
RNU6-248P-201ENST00000410720 PTGIRP43119 386 aa7.67□□□□□ -1.18
RNU6-248P-201ENST00000410720 CTSOP43234 321 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms