RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
LRPPRC-203ENST00000409946 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
LRPPRC-203ENST00000409946 PNNQ9H307 717 aaKnown RBP23.01■■□□□ 1.27
LRPPRC-203ENST00000409946 FLT4P35916 1363 aa23■■□□□ 1.27
LRPPRC-203ENST00000409946 PHACTR3Q96KR7 559 aa23■■□□□ 1.27
LRPPRC-203ENST00000409946 MSH6P52701 1360 aa23■■□□□ 1.27
LRPPRC-203ENST00000409946 TRIM35Q9UPQ4 493 aa22.99■■□□□ 1.27
LRPPRC-203ENST00000409946 NFAT5O94916 1531 aa22.99■■□□□ 1.27
LRPPRC-203ENST00000409946 AMPHP49418 695 aa22.98■■□□□ 1.27
LRPPRC-203ENST00000409946 AEBP1Q8IUX7 1158 aa22.98■■□□□ 1.27
LRPPRC-203ENST00000409946 RIPK4P57078 832 aa22.98■■□□□ 1.27
LRPPRC-203ENST00000409946 WDR63Q8IWG1 891 aa22.98■■□□□ 1.27
LRPPRC-203ENST00000409946 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
LRPPRC-203ENST00000409946 ALS2Q96Q42 1657 aa22.97■■□□□ 1.27
LRPPRC-203ENST00000409946 PLEKHG5O94827 1062 aa22.97■■□□□ 1.27
LRPPRC-203ENST00000409946 NCBP3Q53F19 620 aaKnown RBP22.97■■□□□ 1.27
LRPPRC-203ENST00000409946 KRT28Q7Z3Y7 464 aa22.97■■□□□ 1.27
LRPPRC-203ENST00000409946 CADPS2Q86UW7 1296 aa22.96■■□□□ 1.27
LRPPRC-203ENST00000409946 SULT6B1Q6IMI4 303 aa22.95■■□□□ 1.26
LRPPRC-203ENST00000409946 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
LRPPRC-203ENST00000409946 PLIN1O60240 522 aa22.94■■□□□ 1.26
LRPPRC-203ENST00000409946 NEFMP07197 916 aa22.94■■□□□ 1.26
LRPPRC-203ENST00000409946 HOXC9P31274 260 aa22.94■■□□□ 1.26
LRPPRC-203ENST00000409946 SLIT3O75094 1523 aa22.93■■□□□ 1.26
LRPPRC-203ENST00000409946 TSHZ2Q9NRE2 1034 aa22.93■■□□□ 1.26
LRPPRC-203ENST00000409946 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
LRPPRC-203ENST00000409946 ARHGEF10O15013 1369 aa22.91■■□□□ 1.26
LRPPRC-203ENST00000409946 ZBTB7CA1YPR0 619 aa22.9■■□□□ 1.26
LRPPRC-203ENST00000409946 KIF24Q5T7B8 1368 aa22.9■■□□□ 1.26
LRPPRC-203ENST00000409946 RGPD2P0DJD1 1756 aa22.9■■□□□ 1.26
LRPPRC-203ENST00000409946 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
LRPPRC-203ENST00000409946 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.26
LRPPRC-203ENST00000409946 TSR2Q969E8 191 aaKnown RBP22.89■■□□□ 1.25
LRPPRC-203ENST00000409946 RTL1A6NKG5 1358 aa22.88■■□□□ 1.25
LRPPRC-203ENST00000409946 LTV1Q96GA3 475 aaPredicted RBP22.88■■□□□ 1.25
LRPPRC-203ENST00000409946 EYA1Q99502 592 aa22.88■■□□□ 1.25
LRPPRC-203ENST00000409946 MED1Q15648 1581 aaPredicted RBP22.88■■□□□ 1.25
LRPPRC-203ENST00000409946 THUMPD2Q9BTF0 503 aaKnown RBP22.87■■□□□ 1.25
LRPPRC-203ENST00000409946 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
LRPPRC-203ENST00000409946 USP19O94966 1318 aa22.87■■□□□ 1.25
LRPPRC-203ENST00000409946 RGPD5Q99666 1765 aa22.87■■□□□ 1.25
LRPPRC-203ENST00000409946 KCNH5Q8NCM2 988 aa22.87■■□□□ 1.25
LRPPRC-203ENST00000409946 IGSF1Q8N6C5 1336 aa22.86■■□□□ 1.25
LRPPRC-203ENST00000409946 FANCIQ9NVI1 1328 aa22.86■■□□□ 1.25
LRPPRC-203ENST00000409946 PXDNQ92626 1479 aa22.86■■□□□ 1.25
LRPPRC-203ENST00000409946 GCP02774 474 aa22.86■■□□□ 1.25
LRPPRC-203ENST00000409946 BCAR3O75815 825 aa22.85■■□□□ 1.25
LRPPRC-203ENST00000409946 NPHP3Q7Z494 1330 aa22.85■■□□□ 1.25
LRPPRC-203ENST00000409946 B4GALNT3Q6L9W6 998 aa22.85■■□□□ 1.25
LRPPRC-203ENST00000409946 BRINP3Q76B58 766 aa22.85■■□□□ 1.25
LRPPRC-203ENST00000409946 EXOC6Q8TAG9 804 aa22.84■■□□□ 1.25
LRPPRC-203ENST00000409946 IP6K1Q92551 441 aa22.84■■□□□ 1.25
LRPPRC-203ENST00000409946 IL16Q14005 1332 aa22.84■■□□□ 1.25
LRPPRC-203ENST00000409946 C20orf194Q5TEA3 1177 aa22.83■■□□□ 1.25
LRPPRC-203ENST00000409946 KDRP35968 1356 aa22.83■■□□□ 1.25
LRPPRC-203ENST00000409946 CRYBG1Q9Y4K1 1723 aa22.83■■□□□ 1.25
LRPPRC-203ENST00000409946 FAM83GA6ND36 823 aa22.82■■□□□ 1.24
LRPPRC-203ENST00000409946 TNS3Q68CZ2 1445 aa22.82■■□□□ 1.24
LRPPRC-203ENST00000409946 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
LRPPRC-203ENST00000409946 ARHGEF25Q86VW2 580 aa22.8■■□□□ 1.24
LRPPRC-203ENST00000409946 SLAIN2Q9P270 581 aa22.8■■□□□ 1.24
LRPPRC-203ENST00000409946 EXOSC9Q06265 439 aaKnown RBP22.8■■□□□ 1.24
LRPPRC-203ENST00000409946 USHBP1Q8N6Y0 703 aa22.8■■□□□ 1.24
LRPPRC-203ENST00000409946 LAS1LQ9Y4W2 734 aaKnown RBP22.8■■□□□ 1.24
LRPPRC-203ENST00000409946 CRBNQ96SW2 442 aa22.79■■□□□ 1.24
LRPPRC-203ENST00000409946 RARSP54136 660 aaKnown RBP22.77■■□□□ 1.24
LRPPRC-203ENST00000409946 LMOD3Q0VAK6 560 aa22.77■■□□□ 1.24
LRPPRC-203ENST00000409946 CABLES1Q8TDN4 633 aa22.77■■□□□ 1.24
LRPPRC-203ENST00000409946 SPATA31A3Q5VYP0 1347 aa22.76■■□□□ 1.23
LRPPRC-203ENST00000409946 ZC3H6P61129 1189 aaKnown RBP22.76■■□□□ 1.23
LRPPRC-203ENST00000409946 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
LRPPRC-203ENST00000409946 BCL2L13Q9BXK5 485 aa22.76■■□□□ 1.23
LRPPRC-203ENST00000409946 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.75■■□□□ 1.23
LRPPRC-203ENST00000409946 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
LRPPRC-203ENST00000409946 NBPF6Q5VWK0 638 aa22.74■■□□□ 1.23
LRPPRC-203ENST00000409946 NBPF4Q96M43 638 aa22.74■■□□□ 1.23
LRPPRC-203ENST00000409946 COL18A1P39060 1754 aa22.74■■□□□ 1.23
LRPPRC-203ENST00000409946 MCM10Q7L590 875 aa22.73■■□□□ 1.23
LRPPRC-203ENST00000409946 AXIN2Q9Y2T1 843 aa22.73■■□□□ 1.23
LRPPRC-203ENST00000409946 NHSL1Q5SYE7 1610 aa22.73■■□□□ 1.23
LRPPRC-203ENST00000409946 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
LRPPRC-203ENST00000409946 IFT57Q9NWB7 429 aa22.72■■□□□ 1.23
LRPPRC-203ENST00000409946 CAMTA1Q9Y6Y1 1673 aa22.71■■□□□ 1.23
LRPPRC-203ENST00000409946 ZNF853P0CG23 659 aa22.71■■□□□ 1.23
LRPPRC-203ENST00000409946 CCDC136Q96JN2 1154 aa22.71■■□□□ 1.23
LRPPRC-203ENST00000409946 GNAI1P63096 354 aa22.71■■□□□ 1.23
LRPPRC-203ENST00000409946 ANKRD24Q8TF21 1146 aa22.71■■□□□ 1.23
LRPPRC-203ENST00000409946 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
LRPPRC-203ENST00000409946 FRAT1Q92837 279 aaPredicted RBP22.7■■□□□ 1.22
LRPPRC-203ENST00000409946 SOS2Q07890 1332 aaPredicted RBP22.7■■□□□ 1.22
LRPPRC-203ENST00000409946 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
LRPPRC-203ENST00000409946 LTBP4Q8N2S1 1624 aa22.69■■□□□ 1.22
LRPPRC-203ENST00000409946 CANXP27824 592 aaKnown RBP22.68■■□□□ 1.22
LRPPRC-203ENST00000409946 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
LRPPRC-203ENST00000409946 GAS2L2Q8NHY3 880 aa22.68■■□□□ 1.22
LRPPRC-203ENST00000409946 CFAP44Q96MT7 982 aa22.68■■□□□ 1.22
LRPPRC-203ENST00000409946 TNNQ9UQP3 1299 aa22.68■■□□□ 1.22
LRPPRC-203ENST00000409946 LRRC37A3O60309 1634 aa22.68■■□□□ 1.22
LRPPRC-203ENST00000409946 CRB1P82279 1406 aa22.66■■□□□ 1.22
LRPPRC-203ENST00000409946 CHRNA2Q15822 529 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms