RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 SOX12O15370 315 aa35.17■■■■□ 3.22
C2orf88-204ENST00000409870 LMO7Q8WWI1 1683 aa35.17■■■■□ 3.22
C2orf88-204ENST00000409870 CCDC125Q86Z20 511 aa35.16■■■■□ 3.22
C2orf88-204ENST00000409870 LTN1O94822 1766 aa35.16■■■■□ 3.22
C2orf88-204ENST00000409870 AMER1Q5JTC6 1135 aaPredicted RBP35.15■■■■□ 3.22
C2orf88-204ENST00000409870 COL18A1P39060 1754 aa35.14■■■■□ 3.22
C2orf88-204ENST00000409870 BLMP54132 1417 aaPredicted RBP35.14■■■■□ 3.22
C2orf88-204ENST00000409870 ARHGEF25Q86VW2 580 aa35.14■■■■□ 3.22
C2orf88-204ENST00000409870 ZNF316A6NFI3 1004 aaPredicted RBP35.13■■■■□ 3.21
C2orf88-204ENST00000409870 CHRNA2Q15822 529 aa35.13■■■■□ 3.21
C2orf88-204ENST00000409870 THSD7AQ9UPZ6 1657 aa35.12■■■■□ 3.21
C2orf88-204ENST00000409870 ABCC6O95255 1503 aa35.12■■■■□ 3.21
C2orf88-204ENST00000409870 A0A0G2JS52 829 aa35.12■■■■□ 3.21
C2orf88-204ENST00000409870 MYT1Q01538 1121 aa35.12■■■■□ 3.21
C2orf88-204ENST00000409870 SPATA31A5Q5VU36 1347 aa35.11■■■■□ 3.21
C2orf88-204ENST00000409870 SPATA31A7Q8IWB4 1347 aa35.11■■■■□ 3.21
C2orf88-204ENST00000409870 FAM98CQ17RN3 349 aaKnown RBP35.11■■■■□ 3.21
C2orf88-204ENST00000409870 AATKQ6ZMQ8 1374 aa35.1■■■■□ 3.21
C2orf88-204ENST00000409870 KRT27Q7Z3Y8 459 aa35.1■■■■□ 3.21
C2orf88-204ENST00000409870 NPC1L1Q9UHC9 1359 aa35.09■■■■□ 3.21
C2orf88-204ENST00000409870 CAMTA1Q9Y6Y1 1673 aa35.08■■■■□ 3.21
C2orf88-204ENST00000409870 ZBTB7CA1YPR0 619 aa35.06■■■■□ 3.2
C2orf88-204ENST00000409870 DDX10Q13206 875 aaKnown RBP35.04■■■■□ 3.2
C2orf88-204ENST00000409870 FBLN1P23142 703 aa35.03■■■■□ 3.2
C2orf88-204ENST00000409870 RGPD5Q99666 1765 aa35.03■■■■□ 3.2
C2orf88-204ENST00000409870 MAP3K19Q56UN5 1328 aa35.02■■■■□ 3.2
C2orf88-204ENST00000409870 STRN4Q9NRL3 753 aa35.02■■■■□ 3.2
C2orf88-204ENST00000409870 COL5A2P05997 1499 aaPredicted RBP35.01■■■■□ 3.2
C2orf88-204ENST00000409870 SPATA31A1Q5TZJ5 1347 aa35.01■■■■□ 3.19
C2orf88-204ENST00000409870 MORC1Q86VD1 984 aa35■■■■□ 3.19
C2orf88-204ENST00000409870 MAP2P11137 1827 aaKnown RBP34.99■■■■□ 3.19
C2orf88-204ENST00000409870 RTL1A6NKG5 1358 aa34.99■■■■□ 3.19
C2orf88-204ENST00000409870 RRS1Q15050 365 aaKnown RBP34.98■■■■□ 3.19
C2orf88-204ENST00000409870 CC2D1BQ5T0F9 858 aaKnown RBP34.98■■■■□ 3.19
C2orf88-204ENST00000409870 PEAK1Q9H792 1746 aa34.98■■■■□ 3.19
C2orf88-204ENST00000409870 SF3B2Q13435 895 aaKnown RBP34.98■■■■□ 3.19
C2orf88-204ENST00000409870 AXIN2Q9Y2T1 843 aa34.98■■■■□ 3.19
C2orf88-204ENST00000409870 RGPD1P0DJD0 1748 aa34.96■■■■□ 3.19
C2orf88-204ENST00000409870 KIF24Q5T7B8 1368 aa34.95■■■■□ 3.19
C2orf88-204ENST00000409870 TNNT2P45379 298 aaPredicted RBP34.95■■■■□ 3.19
C2orf88-204ENST00000409870 IP6K1Q92551 441 aa34.94■■■■□ 3.18
C2orf88-204ENST00000409870 HOXC9P31274 260 aa34.92■■■■□ 3.18
C2orf88-204ENST00000409870 AMPHP49418 695 aa34.92■■■■□ 3.18
C2orf88-204ENST00000409870 EVA1CP58658 441 aa34.92■■■■□ 3.18
C2orf88-204ENST00000409870 SMG6Q86US8 1419 aaKnown RBP34.92■■■■□ 3.18
C2orf88-204ENST00000409870 DEFB132Q7Z7B7 95 aa34.91■■■■□ 3.18
C2orf88-204ENST00000409870 EMILIN1Q9Y6C2 1016 aa34.91■■■■□ 3.18
C2orf88-204ENST00000409870 FLT4P35916 1363 aa34.91■■■■□ 3.18
C2orf88-204ENST00000409870 POLKQ9UBT6 870 aa34.9■■■■□ 3.18
C2orf88-204ENST00000409870 USP35Q9P2H5 1018 aa34.89■■■■□ 3.18
C2orf88-204ENST00000409870 TNS1Q9HBL0 1735 aaKnown RBP34.89■■■■□ 3.18
C2orf88-204ENST00000409870 ERBB3P21860 1342 aa34.88■■■■□ 3.17
C2orf88-204ENST00000409870 CNGB1Q14028 1251 aaPredicted RBP34.88■■■■□ 3.17
C2orf88-204ENST00000409870 LARP1Q6PKG0 1096 aaKnown RBP34.88■■■■□ 3.17
C2orf88-204ENST00000409870 WDR17Q8IZU2 1322 aa34.87■■■■□ 3.17
C2orf88-204ENST00000409870 FAM208AQ9UK61 1670 aaKnown RBP34.86■■■■□ 3.17
C2orf88-204ENST00000409870 CRB1P82279 1406 aa34.86■■■■□ 3.17
C2orf88-204ENST00000409870 FAM182BQ5T319 152 aa34.85■■■■□ 3.17
C2orf88-204ENST00000409870 BARGINQ6ZT62 677 aa34.85■■■■□ 3.17
C2orf88-204ENST00000409870 INSRP06213 1382 aa34.85■■■■□ 3.17
C2orf88-204ENST00000409870 ANKRD24Q8TF21 1146 aa34.83■■■■□ 3.17
C2orf88-204ENST00000409870 PARP4Q9UKK3 1724 aaKnown RBP34.83■■■■□ 3.17
C2orf88-204ENST00000409870 SRCAPQ6ZRS2 3230 aa34.81■■■■□ 3.16
C2orf88-204ENST00000409870 PPM1GO15355 546 aaPredicted RBP34.81■■■■□ 3.16
C2orf88-204ENST00000409870 BAG6P46379 1132 aa34.81■■■■□ 3.16
C2orf88-204ENST00000409870 TCP11L2Q8N4U5 519 aa34.81■■■■□ 3.16
C2orf88-204ENST00000409870 HSP90AB2PQ58FF8 381 aa34.81■■■■□ 3.16
C2orf88-204ENST00000409870 PARD3Q8TEW0 1356 aa34.8■■■■□ 3.16
C2orf88-204ENST00000409870 CSB-PGBD3P0DP91 1061 aa34.8■■■■□ 3.16
C2orf88-204ENST00000409870 THRAP3Q9Y2W1 955 aaKnown RBP34.79■■■■□ 3.16
C2orf88-204ENST00000409870 WNK3Q9BYP7 1800 aa34.78■■■■□ 3.16
C2orf88-204ENST00000409870 TOM1L2Q6ZVM7 507 aa34.78■■■■□ 3.16
C2orf88-204ENST00000409870 LTV1Q96GA3 475 aaPredicted RBP34.76■■■■□ 3.16
C2orf88-204ENST00000409870 DISP2A7MBM2 1401 aa34.76■■■■□ 3.16
C2orf88-204ENST00000409870 RGPD2P0DJD1 1756 aa34.74■■■■□ 3.15
C2orf88-204ENST00000409870 CARD10Q9BWT7 1032 aa34.74■■■■□ 3.15
C2orf88-204ENST00000409870 LRRC37A3O60309 1634 aa34.74■■■■□ 3.15
C2orf88-204ENST00000409870 FAM196AQ6ZSG2 479 aa34.73■■■■□ 3.15
C2orf88-204ENST00000409870 MTHFSP49914 203 aa34.72■■■■□ 3.15
C2orf88-204ENST00000409870 PDE3BQ13370 1112 aa34.72■■■■□ 3.15
C2orf88-204ENST00000409870 NLRP2Q9NX02 1062 aa34.71■■■■□ 3.15
C2orf88-204ENST00000409870 PPP2R1AP30153 589 aa34.7■■■■□ 3.15
C2orf88-204ENST00000409870 EN1Q05925 392 aaPredicted RBP34.68■■■■□ 3.14
C2orf88-204ENST00000409870 RALBP1Q15311 655 aa34.68■■■■□ 3.14
C2orf88-204ENST00000409870 TRIM37O94972 964 aa34.65■■■■□ 3.14
C2orf88-204ENST00000409870 EIF4A2Q14240 407 aaKnown RBP34.65■■■■□ 3.14
C2orf88-204ENST00000409870 COL3A1P02461 1466 aaPredicted RBP34.65■■■■□ 3.14
C2orf88-204ENST00000409870 NBPF6Q5VWK0 638 aa34.64■■■■□ 3.14
C2orf88-204ENST00000409870 NBPF4Q96M43 638 aa34.64■■■■□ 3.14
C2orf88-204ENST00000409870 NCAPD2Q15021 1401 aa34.63■■■■□ 3.13
C2orf88-204ENST00000409870 PRKRIP1Q9H875 184 aaPredicted RBP34.61■■■■□ 3.13
C2orf88-204ENST00000409870 OVOS2A0A0G2JMS6 1433 aa34.6■■■■□ 3.13
C2orf88-204ENST00000409870 RREB1Q92766 1687 aa34.6■■■■□ 3.13
C2orf88-204ENST00000409870 LRP5O75197 1615 aa34.58■■■■□ 3.13
C2orf88-204ENST00000409870 IL13P35225 146 aa34.57■■■■□ 3.13
C2orf88-204ENST00000409870 EYA1Q99502 592 aa34.57■■■■□ 3.13
C2orf88-204ENST00000409870 CDCA7Q9BWT1 371 aaPredicted RBP34.57■■■■□ 3.13
C2orf88-204ENST00000409870 EZH2Q15910 746 aaKnown RBP34.56■■■■□ 3.12
C2orf88-204ENST00000409870 MYBBP1AQ9BQG0 1328 aaKnown RBP34.56■■■■□ 3.12
C2orf88-204ENST00000409870 SBF2Q86WG5 1849 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms