RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 KIF3AQ9Y496 699 aa19.95■□□□□ 0.78
PTPRN2-205ENST00000409483 TEX14Q8IWB6 1497 aa19.95■□□□□ 0.78
PTPRN2-205ENST00000409483 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
PTPRN2-205ENST00000409483 WASHC4Q2M389 1173 aa19.95■□□□□ 0.78
PTPRN2-205ENST00000409483 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
PTPRN2-205ENST00000409483 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 MBIPQ9NS73 344 aa19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 TBC1D2Q9BYX2 928 aa19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 IFT57Q9NWB7 429 aa19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 MCM4P33991 863 aa19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 NASPP49321 788 aaPredicted RBP19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 FOXO3O43524 673 aa19.94■□□□□ 0.78
PTPRN2-205ENST00000409483 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 DENND4BO75064 1496 aaPredicted RBP19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 HSP90AB2PQ58FF8 381 aa19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 CPLX1O14810 134 aa19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 TSHZ3Q63HK5 1081 aa19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 UPF3BQ9BZI7 483 aaKnown RBP19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 FIBPO43427 364 aa19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 MRE11P49959 708 aa19.93■□□□□ 0.78
PTPRN2-205ENST00000409483 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 BECN2A8MW95 431 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 RASSF8Q8NHQ8 419 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 BTBD11A6QL63 1104 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 GNAT3A8MTJ3 354 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 AEBP1Q8IUX7 1158 aa19.92■□□□□ 0.78
PTPRN2-205ENST00000409483 RPAP2Q8IXW5 612 aaPredicted RBP19.91■□□□□ 0.78
PTPRN2-205ENST00000409483 ANKLE2Q86XL3 938 aa19.91■□□□□ 0.78
PTPRN2-205ENST00000409483 CWC27Q6UX04 472 aaKnown RBP19.91■□□□□ 0.78
PTPRN2-205ENST00000409483 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
PTPRN2-205ENST00000409483 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
PTPRN2-205ENST00000409483 ALDH1L2Q3SY69 923 aa19.9■□□□□ 0.78
PTPRN2-205ENST00000409483 BCL11BQ9C0K0 894 aaPredicted RBP19.9■□□□□ 0.78
PTPRN2-205ENST00000409483 GOLGA6L19H0YKK7 550 aa19.9■□□□□ 0.78
PTPRN2-205ENST00000409483 RBM42Q9BTD8 480 aaKnown RBP19.9■□□□□ 0.78
PTPRN2-205ENST00000409483 A2MP01023 1474 aa19.89■□□□□ 0.78
PTPRN2-205ENST00000409483 DNMT1P26358 1616 aaKnown RBP19.89■□□□□ 0.78
PTPRN2-205ENST00000409483 STK3Q13188 491 aa19.89■□□□□ 0.78
PTPRN2-205ENST00000409483 MPRIPQ6WCQ1 1025 aa19.89■□□□□ 0.78
PTPRN2-205ENST00000409483 CCDC85AQ96PX6 553 aaPredicted RBP19.89■□□□□ 0.77
PTPRN2-205ENST00000409483 ANXA1P04083 346 aa19.88■□□□□ 0.77
PTPRN2-205ENST00000409483 TATP17735 454 aaPredicted RBP19.88■□□□□ 0.77
PTPRN2-205ENST00000409483 ACEP12821 1306 aa19.88■□□□□ 0.77
PTPRN2-205ENST00000409483 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
PTPRN2-205ENST00000409483 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
PTPRN2-205ENST00000409483 AACSQ86V21 672 aa19.87■□□□□ 0.77
PTPRN2-205ENST00000409483 CEBPZQ03701 1054 aaKnown RBP19.87■□□□□ 0.77
PTPRN2-205ENST00000409483 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
PTPRN2-205ENST00000409483 KDM6BO15054 1643 aa19.86■□□□□ 0.77
PTPRN2-205ENST00000409483 TSPYL6Q8N831 410 aa19.86■□□□□ 0.77
PTPRN2-205ENST00000409483 TPM4P67936 248 aa19.86■□□□□ 0.77
PTPRN2-205ENST00000409483 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
PTPRN2-205ENST00000409483 TOM1L2Q6ZVM7 507 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 RSPH6AQ9H0K4 717 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 TRDNQ13061 729 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 C8orf34Q49A92 452 aa19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
PTPRN2-205ENST00000409483 SEC24BO95487 1268 aa19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 CABP4P57796 275 aa19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 ZNF592Q92610 1267 aa19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 HSP90AA2PQ14568 343 aaPredicted RBP19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 NFXL1Q6ZNB6 911 aa19.84■□□□□ 0.77
PTPRN2-205ENST00000409483 NUP160Q12769 1436 aa19.83■□□□□ 0.77
PTPRN2-205ENST00000409483 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.83■□□□□ 0.77
PTPRN2-205ENST00000409483 CPLX2Q6PUV4 134 aaKnown RBP19.83■□□□□ 0.76
PTPRN2-205ENST00000409483 TBC1D9Q6ZT07 1266 aa19.83■□□□□ 0.76
PTPRN2-205ENST00000409483 PTCD1O75127 700 aaKnown RBP19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 MX1P20591 662 aa19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 RALYLQ86SE5 291 aaKnown RBP19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 VPS37DQ86XT2 251 aa19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 FAM13BQ9NYF5 915 aa19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 PES1O00541 588 aaKnown RBP19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 LRRFIP1Q32MZ4 808 aaKnown RBP19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 SYNE3Q6ZMZ3 975 aa19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 PRDM11Q9NQV5 511 aa19.82■□□□□ 0.76
PTPRN2-205ENST00000409483 MEIS3Q99687 375 aa19.81■□□□□ 0.76
PTPRN2-205ENST00000409483 PHF8Q9UPP1 1060 aa19.81■□□□□ 0.76
PTPRN2-205ENST00000409483 FLIIQ13045 1269 aa19.81■□□□□ 0.76
PTPRN2-205ENST00000409483 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
PTPRN2-205ENST00000409483 AKAP17AQ02040 695 aaKnown RBP19.81■□□□□ 0.76
PTPRN2-205ENST00000409483 STK11IPQ8N1F8 1099 aa19.8■□□□□ 0.76
PTPRN2-205ENST00000409483 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
PTPRN2-205ENST00000409483 SHANK2Q9UPX8 1470 aa19.8■□□□□ 0.76
PTPRN2-205ENST00000409483 NSD2O96028 1365 aa19.8■□□□□ 0.76
PTPRN2-205ENST00000409483 GRPEL1Q9HAV7 217 aa19.8■□□□□ 0.76
PTPRN2-205ENST00000409483 UHRF1BP1Q6BDS2 1440 aa19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 JAKMIP1Q96N16 626 aaKnown RBP19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 TBC1D32Q96NH3 1257 aa19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 SPATA31E1Q6ZUB1 1445 aa19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 SSFA2P28290 1259 aa19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 ARHGEF12Q9NZN5 1544 aa19.79■□□□□ 0.76
PTPRN2-205ENST00000409483 PSMA5P28066 241 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms