RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
CUL1-202ENST00000409469 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
CUL1-202ENST00000409469 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
CUL1-202ENST00000409469 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
CUL1-202ENST00000409469 CCDC27Q2M243 656 aa12.87□□□□□ -0.35
CUL1-202ENST00000409469 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
CUL1-202ENST00000409469 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
CUL1-202ENST00000409469 RLBP1P12271 317 aa12.87□□□□□ -0.35
CUL1-202ENST00000409469 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
CUL1-202ENST00000409469 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
CUL1-202ENST00000409469 FCHSD2O94868 740 aa12.86□□□□□ -0.35
CUL1-202ENST00000409469 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
CUL1-202ENST00000409469 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
CUL1-202ENST00000409469 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
CUL1-202ENST00000409469 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
CUL1-202ENST00000409469 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
CUL1-202ENST00000409469 XPCQ01831 940 aaPredicted RBP12.85□□□□□ -0.35
CUL1-202ENST00000409469 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
CUL1-202ENST00000409469 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
CUL1-202ENST00000409469 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
CUL1-202ENST00000409469 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
CUL1-202ENST00000409469 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
CUL1-202ENST00000409469 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
CUL1-202ENST00000409469 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
CUL1-202ENST00000409469 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
CUL1-202ENST00000409469 NLRP6P59044 892 aa12.83□□□□□ -0.35
CUL1-202ENST00000409469 CFAP44Q96MT7 982 aa12.83□□□□□ -0.35
CUL1-202ENST00000409469 MAP3K19Q56UN5 1328 aa12.83□□□□□ -0.36
CUL1-202ENST00000409469 A0A0U1RQG5 324 aaPredicted RBP12.83□□□□□ -0.36
CUL1-202ENST00000409469 NEFMP07197 916 aa12.83□□□□□ -0.36
CUL1-202ENST00000409469 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 FGD1P98174 961 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 NFE2L2Q16236 605 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
CUL1-202ENST00000409469 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
CUL1-202ENST00000409469 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
CUL1-202ENST00000409469 IGHDP01880 384 aa12.81□□□□□ -0.36
CUL1-202ENST00000409469 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
CUL1-202ENST00000409469 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
CUL1-202ENST00000409469 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
CUL1-202ENST00000409469 MSH5O43196 834 aa12.8□□□□□ -0.36
CUL1-202ENST00000409469 TSPYL6Q8N831 410 aa12.8□□□□□ -0.36
CUL1-202ENST00000409469 FOXO3O43524 673 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 RGS3P49796 1198 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 AMPHP49418 695 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 HSPA2P54652 639 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 MCM10Q7L590 875 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
CUL1-202ENST00000409469 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
CUL1-202ENST00000409469 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
CUL1-202ENST00000409469 KRT24Q2M2I5 525 aa12.78□□□□□ -0.36
CUL1-202ENST00000409469 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
CUL1-202ENST00000409469 CHD2O14647 1828 aaKnown RBP12.77□□□□□ -0.36
CUL1-202ENST00000409469 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.36
CUL1-202ENST00000409469 PDE3AQ14432 1141 aa12.77□□□□□ -0.36
CUL1-202ENST00000409469 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.36
CUL1-202ENST00000409469 MBIPQ9NS73 344 aa12.77□□□□□ -0.36
CUL1-202ENST00000409469 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.36
CUL1-202ENST00000409469 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
CUL1-202ENST00000409469 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
CUL1-202ENST00000409469 TRIM27P14373 513 aa12.77□□□□□ -0.37
CUL1-202ENST00000409469 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
CUL1-202ENST00000409469 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.37
CUL1-202ENST00000409469 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
CUL1-202ENST00000409469 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
CUL1-202ENST00000409469 IGSF3O75054 1194 aa12.76□□□□□ -0.37
CUL1-202ENST00000409469 FTSJ3Q8IY81 847 aaKnown RBP12.76□□□□□ -0.37
CUL1-202ENST00000409469 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
CUL1-202ENST00000409469 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
CUL1-202ENST00000409469 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
CUL1-202ENST00000409469 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
CUL1-202ENST00000409469 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
CUL1-202ENST00000409469 PSME1Q06323 249 aa12.75□□□□□ -0.37
CUL1-202ENST00000409469 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
CUL1-202ENST00000409469 CENPQQ7L2Z9 268 aaPredicted RBP12.75□□□□□ -0.37
CUL1-202ENST00000409469 EYA1Q99502 592 aa12.75□□□□□ -0.37
CUL1-202ENST00000409469 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
CUL1-202ENST00000409469 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
CUL1-202ENST00000409469 C8orf58Q8NAV2 365 aa12.74□□□□□ -0.37
CUL1-202ENST00000409469 IL16Q14005 1332 aa12.74□□□□□ -0.37
CUL1-202ENST00000409469 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
CUL1-202ENST00000409469 PDE4AP27815 886 aa12.74□□□□□ -0.37
CUL1-202ENST00000409469 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
CUL1-202ENST00000409469 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
CUL1-202ENST00000409469 FLT4P35916 1363 aa12.74□□□□□ -0.37
CUL1-202ENST00000409469 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
CUL1-202ENST00000409469 HOXC9P31274 260 aa12.73□□□□□ -0.37
CUL1-202ENST00000409469 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
CUL1-202ENST00000409469 TMEM57Q8N5G2 664 aa12.72□□□□□ -0.37
CUL1-202ENST00000409469 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
CUL1-202ENST00000409469 VAMP4O75379 141 aa12.71□□□□□ -0.37
CUL1-202ENST00000409469 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
CUL1-202ENST00000409469 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
CUL1-202ENST00000409469 ANP32EQ9BTT0 268 aa12.71□□□□□ -0.37
CUL1-202ENST00000409469 GNAI1P63096 354 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms