RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 PDILTQ8N807 584 aa18.26■□□□□ 0.51
PPM1F-203ENST00000407142 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
PPM1F-203ENST00000407142 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.26■□□□□ 0.51
PPM1F-203ENST00000407142 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
PPM1F-203ENST00000407142 GNAI2P04899 355 aa18.25■□□□□ 0.51
PPM1F-203ENST00000407142 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
PPM1F-203ENST00000407142 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
PPM1F-203ENST00000407142 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
PPM1F-203ENST00000407142 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
PPM1F-203ENST00000407142 RDXP35241 583 aaKnown RBP18.25■□□□□ 0.51
PPM1F-203ENST00000407142 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.515e-7■■■□□ 18.2
PPM1F-203ENST00000407142 CUL7Q14999 1698 aa18.25■□□□□ 0.51
PPM1F-203ENST00000407142 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
PPM1F-203ENST00000407142 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
PPM1F-203ENST00000407142 EXOSC9Q06265 439 aaKnown RBP18.25■□□□□ 0.51
PPM1F-203ENST00000407142 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
PPM1F-203ENST00000407142 PANK1Q8TE04 598 aa18.24■□□□□ 0.51
PPM1F-203ENST00000407142 CCDC61Q9Y6R9 512 aa18.24■□□□□ 0.51
PPM1F-203ENST00000407142 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
PPM1F-203ENST00000407142 AKNAQ7Z591 1439 aa18.24■□□□□ 0.51
PPM1F-203ENST00000407142 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
PPM1F-203ENST00000407142 KIF14Q15058 1648 aa18.23■□□□□ 0.51
PPM1F-203ENST00000407142 SDF4Q9BRK5 362 aa18.23■□□□□ 0.51
PPM1F-203ENST00000407142 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
PPM1F-203ENST00000407142 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
PPM1F-203ENST00000407142 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
PPM1F-203ENST00000407142 CCP110O43303 1012 aa18.22■□□□□ 0.51
PPM1F-203ENST00000407142 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
PPM1F-203ENST00000407142 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
PPM1F-203ENST00000407142 ZC3H6P61129 1189 aaKnown RBP18.22■□□□□ 0.51
PPM1F-203ENST00000407142 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
PPM1F-203ENST00000407142 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
PPM1F-203ENST00000407142 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
PPM1F-203ENST00000407142 LEKR1Q6ZMV7 388 aa18.2■□□□□ 0.5
PPM1F-203ENST00000407142 MTMR7Q9Y216 660 aa18.2■□□□□ 0.5
PPM1F-203ENST00000407142 CT47A1Q5JQC4 288 aaPredicted RBP18.2■□□□□ 0.5
PPM1F-203ENST00000407142 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
PPM1F-203ENST00000407142 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
PPM1F-203ENST00000407142 KRI1Q8N9T8 703 aaKnown RBP18.2■□□□□ 0.5
PPM1F-203ENST00000407142 STARD3NLO95772 234 aa18.2■□□□□ 0.5
PPM1F-203ENST00000407142 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
PPM1F-203ENST00000407142 PRPF40AO75400 957 aaKnown RBP18.19■□□□□ 0.5
PPM1F-203ENST00000407142 MYL6BP14649 208 aa18.19■□□□□ 0.5
PPM1F-203ENST00000407142 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
PPM1F-203ENST00000407142 SMC2O95347 1197 aa18.19■□□□□ 0.5
PPM1F-203ENST00000407142 NACAP1Q9BZK3 213 aa18.19■□□□□ 0.5
PPM1F-203ENST00000407142 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
PPM1F-203ENST00000407142 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
PPM1F-203ENST00000407142 TTLL5Q6EMB2 1281 aa18.18■□□□□ 0.5
PPM1F-203ENST00000407142 OFD1O75665 1012 aa18.17■□□□□ 0.5
PPM1F-203ENST00000407142 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
PPM1F-203ENST00000407142 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
PPM1F-203ENST00000407142 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
PPM1F-203ENST00000407142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.56e-6■□□□□ 11
PPM1F-203ENST00000407142 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
PPM1F-203ENST00000407142 KINO60870 393 aaKnown RBP18.16■□□□□ 0.5
PPM1F-203ENST00000407142 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
PPM1F-203ENST00000407142 FCHSD2O94868 740 aa18.16■□□□□ 0.5
PPM1F-203ENST00000407142 MYO6Q9UM54 1294 aa18.16■□□□□ 0.5
PPM1F-203ENST00000407142 TSPYL1Q9H0U9 437 aa18.16■□□□□ 0.5
PPM1F-203ENST00000407142 MCM2P49736 904 aa18.16■□□□□ 0.5
PPM1F-203ENST00000407142 RABEP1Q15276 862 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 TMOD3Q9NYL9 352 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
PPM1F-203ENST00000407142 PHF8Q9UPP1 1060 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 PLB1Q6P1J6 1458 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 ODF2Q5BJF6 829 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 SMARCE1Q969G3 411 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 EPS15P42566 896 aa18.15■□□□□ 0.5
PPM1F-203ENST00000407142 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
PPM1F-203ENST00000407142 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
PPM1F-203ENST00000407142 WWC2Q6AWC2 1192 aa18.14■□□□□ 0.49
PPM1F-203ENST00000407142 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
PPM1F-203ENST00000407142 AXDND1Q5T1B0 1012 aaPredicted RBP18.14■□□□□ 0.49
PPM1F-203ENST00000407142 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
PPM1F-203ENST00000407142 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
PPM1F-203ENST00000407142 NEK4P51957 841 aa18.13■□□□□ 0.49
PPM1F-203ENST00000407142 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
PPM1F-203ENST00000407142 FILIP1LQ4L180 1135 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 SPC24Q8NBT2 197 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 PDCP20941 246 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 AMOTQ4VCS5 1084 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 GRPEL1Q9HAV7 217 aa18.12■□□□□ 0.49
PPM1F-203ENST00000407142 ZPR1O75312 459 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 ATP2B2Q01814 1243 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 TMEM132AQ24JP5 1023 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 LRRCC1Q9C099 1032 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 DHX8Q14562 1220 aaKnown RBP18.11■□□□□ 0.49
PPM1F-203ENST00000407142 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 CEP126Q9P2H0 1117 aa18.11■□□□□ 0.49
PPM1F-203ENST00000407142 FIBPO43427 364 aa18.1■□□□□ 0.49
PPM1F-203ENST00000407142 ADAMTS2O95450 1211 aa18.1■□□□□ 0.49
PPM1F-203ENST00000407142 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
PPM1F-203ENST00000407142 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 349.9 ms