RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GDPD2Q9HCC8 539 aa9.86□□□□□ -0.83
HMGB1P13-201ENST00000406019 AXIN1O15169 862 aa9.85□□□□□ -0.83
HMGB1P13-201ENST00000406019 POM121Q96HA1 1249 aa9.85□□□□□ -0.83
HMGB1P13-201ENST00000406019 KCTD15Q96SI1 283 aaPredicted RBP9.85□□□□□ -0.83
HMGB1P13-201ENST00000406019 CDV3Q9UKY7 258 aaKnown RBP9.85□□□□□ -0.83
HMGB1P13-201ENST00000406019 INTS6LQ5JSJ4 861 aaKnown RBP9.84□□□□□ -0.83
HMGB1P13-201ENST00000406019 POTECB2RU33 542 aa9.83□□□□□ -0.84
HMGB1P13-201ENST00000406019 FLIIQ13045 1269 aa9.83□□□□□ -0.84
HMGB1P13-201ENST00000406019 TRIM46Q7Z4K8 759 aa9.82□□□□□ -0.84
HMGB1P13-201ENST00000406019 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
HMGB1P13-201ENST00000406019 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
HMGB1P13-201ENST00000406019 WDR4P57081 412 aaKnown RBP9.81□□□□□ -0.84
HMGB1P13-201ENST00000406019 CCDC116Q8IYX3 515 aa9.81□□□□□ -0.84
HMGB1P13-201ENST00000406019 ATP13A2Q9NQ11 1180 aa9.81□□□□□ -0.84
HMGB1P13-201ENST00000406019 CAPN5O15484 640 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P13-201ENST00000406019 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
HMGB1P13-201ENST00000406019 ZIC2O95409 532 aaPredicted RBP9.79□□□□□ -0.84
HMGB1P13-201ENST00000406019 NBPF20Q3BBV1 942 aa9.79□□□□□ -0.84
HMGB1P13-201ENST00000406019 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
HMGB1P13-201ENST00000406019 PCDHB9Q9Y5E1 797 aa9.79□□□□□ -0.84
HMGB1P13-201ENST00000406019 ABL2P42684 1182 aa9.78□□□□□ -0.84
HMGB1P13-201ENST00000406019 GIGYF1O75420 1035 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P13-201ENST00000406019 BMP1P13497 986 aa9.77□□□□□ -0.85
HMGB1P13-201ENST00000406019 C14orf37Q86TY3 774 aa9.77□□□□□ -0.85
HMGB1P13-201ENST00000406019 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
HMGB1P13-201ENST00000406019 MCCD1P59942 119 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 VAC14Q08AM6 782 aa9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 MEIOBQ8N635 442 aa9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 ARXQ96QS3 562 aa9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 PRM3Q9NNZ6 103 aa9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 EMILIN1Q9Y6C2 1016 aa9.76□□□□□ -0.85
HMGB1P13-201ENST00000406019 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
HMGB1P13-201ENST00000406019 LILRA1O75019 489 aa9.75□□□□□ -0.85
HMGB1P13-201ENST00000406019 Q6ZVU0 165 aa9.75□□□□□ -0.85
HMGB1P13-201ENST00000406019 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P13-201ENST00000406019 TMPRSS4Q9NRS4 437 aa9.74□□□□□ -0.85
HMGB1P13-201ENST00000406019 UBTFP17480 764 aaKnown RBP9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 PHTF2Q8N3S3 785 aa9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 ZNF784Q8NCA9 323 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 TRIM47Q96LD4 638 aa9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
HMGB1P13-201ENST00000406019 CBLBQ13191 982 aa9.72□□□□□ -0.85
HMGB1P13-201ENST00000406019 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P13-201ENST00000406019 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
HMGB1P13-201ENST00000406019 ZNF787Q6DD87 383 aa9.71□□□□□ -0.86
HMGB1P13-201ENST00000406019 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
HMGB1P13-201ENST00000406019 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
HMGB1P13-201ENST00000406019 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
HMGB1P13-201ENST00000406019 ZNF330Q9Y3S2 320 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P13-201ENST00000406019 SNRPBP14678 240 aaKnown RBP9.7□□□□□ -0.86
HMGB1P13-201ENST00000406019 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
HMGB1P13-201ENST00000406019 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
HMGB1P13-201ENST00000406019 CCDC85AQ96PX6 553 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P13-201ENST00000406019 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
HMGB1P13-201ENST00000406019 RAB15P59190 212 aa9.69□□□□□ -0.86
HMGB1P13-201ENST00000406019 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.86
HMGB1P13-201ENST00000406019 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
HMGB1P13-201ENST00000406019 ALG2Q9H553 416 aa9.69□□□□□ -0.86
HMGB1P13-201ENST00000406019 A6NJR5 290 aa9.68□□□□□ -0.86
HMGB1P13-201ENST00000406019 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
HMGB1P13-201ENST00000406019 CCDC125Q86Z20 511 aa9.68□□□□□ -0.86
HMGB1P13-201ENST00000406019 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
HMGB1P13-201ENST00000406019 SOX11P35716 441 aa9.67□□□□□ -0.86
HMGB1P13-201ENST00000406019 SCTRP47872 440 aa9.67□□□□□ -0.86
HMGB1P13-201ENST00000406019 RAD21O60216 631 aa9.66□□□□□ -0.86
HMGB1P13-201ENST00000406019 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
HMGB1P13-201ENST00000406019 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
HMGB1P13-201ENST00000406019 PURBQ96QR8 312 aaKnown RBP9.66□□□□□ -0.86
HMGB1P13-201ENST00000406019 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
HMGB1P13-201ENST00000406019 ADH1AP07327 375 aa9.65□□□□□ -0.86
HMGB1P13-201ENST00000406019 PROSER2Q86WR7 435 aaPredicted RBP9.65□□□□□ -0.86
HMGB1P13-201ENST00000406019 KIFC2Q96AC6 838 aa9.65□□□□□ -0.86
HMGB1P13-201ENST00000406019 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
HMGB1P13-201ENST00000406019 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
HMGB1P13-201ENST00000406019 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
HMGB1P13-201ENST00000406019 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
HMGB1P13-201ENST00000406019 TRAK2O60296 914 aa9.64□□□□□ -0.87
HMGB1P13-201ENST00000406019 TSEN34Q9BSV6 310 aaKnown RBP9.64□□□□□ -0.87
HMGB1P13-201ENST00000406019 SOS2Q07890 1332 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P13-201ENST00000406019 PIK3CDO00329 1044 aa9.63□□□□□ -0.87
HMGB1P13-201ENST00000406019 SPINT1O43278 529 aa9.63□□□□□ -0.87
HMGB1P13-201ENST00000406019 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
HMGB1P13-201ENST00000406019 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
HMGB1P13-201ENST00000406019 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
HMGB1P13-201ENST00000406019 SCARF1Q14162 830 aa9.61□□□□□ -0.87
HMGB1P13-201ENST00000406019 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
HMGB1P13-201ENST00000406019 UCN2Q96RP3 112 aa9.61□□□□□ -0.87
HMGB1P13-201ENST00000406019 PTGIRP43119 386 aa9.6□□□□□ -0.87
HMGB1P13-201ENST00000406019 SEMA3FQ13275 785 aa9.6□□□□□ -0.87
HMGB1P13-201ENST00000406019 RNF135Q8IUD6 432 aa9.6□□□□□ -0.87
HMGB1P13-201ENST00000406019 BMP2P12643 396 aa9.59□□□□□ -0.87
HMGB1P13-201ENST00000406019 RELBQ01201 579 aa9.59□□□□□ -0.87
HMGB1P13-201ENST00000406019 DNMT3LQ9UJW3 386 aa9.59□□□□□ -0.87
HMGB1P13-201ENST00000406019 SOBPA7XYQ1 873 aa9.58□□□□□ -0.88
HMGB1P13-201ENST00000406019 CTSOP43234 321 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P13-201ENST00000406019 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms