RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 NUP188Q5SRE5 1749 aa27.74■■■□□ 2.03
HDAC11-205ENST00000404548 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
HDAC11-205ENST00000404548 CDCA7Q9BWT1 371 aaPredicted RBP27.72■■■□□ 2.03
HDAC11-205ENST00000404548 RGPD3A6NKT7 1758 aaPredicted RBP27.72■■■□□ 2.03
HDAC11-205ENST00000404548 RGPD4Q7Z3J3 1758 aa27.72■■■□□ 2.03
HDAC11-205ENST00000404548 BCL9O00512 1426 aa27.71■■■□□ 2.03
HDAC11-205ENST00000404548 TOM1L2Q6ZVM7 507 aa27.71■■■□□ 2.03
HDAC11-205ENST00000404548 NFAT5O94916 1531 aa27.71■■■□□ 2.03
HDAC11-205ENST00000404548 ZBTB7CA1YPR0 619 aa27.7■■■□□ 2.02
HDAC11-205ENST00000404548 DDB1Q16531 1140 aa27.7■■■□□ 2.02
HDAC11-205ENST00000404548 AXIN2Q9Y2T1 843 aa27.7■■■□□ 2.02
HDAC11-205ENST00000404548 WNK3Q9BYP7 1800 aa27.69■■■□□ 2.02
HDAC11-205ENST00000404548 NBPF14Q5TI25 921 aa27.69■■■□□ 2.02
HDAC11-205ENST00000404548 KTN1Q86UP2 1357 aaKnown RBP27.69■■■□□ 2.02
HDAC11-205ENST00000404548 MON2Q7Z3U7 1717 aa27.68■■■□□ 2.02
HDAC11-205ENST00000404548 USP54Q70EL1 1684 aa27.66■■■□□ 2.02
HDAC11-205ENST00000404548 CARD10Q9BWT7 1032 aa27.66■■■□□ 2.02
HDAC11-205ENST00000404548 USP31Q70CQ4 1352 aa27.65■■■□□ 2.02
HDAC11-205ENST00000404548 PLSCR1O15162 318 aa27.65■■■□□ 2.02
HDAC11-205ENST00000404548 SBF2Q86WG5 1849 aa27.64■■■□□ 2.01
HDAC11-205ENST00000404548 BCL11BQ9C0K0 894 aaPredicted RBP27.62■■■□□ 2.01
HDAC11-205ENST00000404548 CD163L1Q9NR16 1453 aa27.62■■■□□ 2.01
HDAC11-205ENST00000404548 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
HDAC11-205ENST00000404548 CARD11Q9BXL7 1154 aa27.61■■■□□ 2.01
HDAC11-205ENST00000404548 MARCH10Q8NA82 808 aaPredicted RBP27.59■■■□□ 2.01
HDAC11-205ENST00000404548 PUS7Q96PZ0 661 aaKnown RBP27.59■■■□□ 2.01
HDAC11-205ENST00000404548 RGPD5Q99666 1765 aa27.58■■■□□ 2.01
HDAC11-205ENST00000404548 CSB-PGBD3P0DP91 1061 aa27.58■■■□□ 2.01
HDAC11-205ENST00000404548 SOX12O15370 315 aa27.57■■■□□ 2
HDAC11-205ENST00000404548 TNS2Q63HR2 1409 aa27.56■■■□□ 2
HDAC11-205ENST00000404548 EDC4Q6P2E9 1401 aaKnown RBP27.56■■■□□ 2
HDAC11-205ENST00000404548 ERBB3P21860 1342 aa27.54■■■□□ 2
HDAC11-205ENST00000404548 TONSLQ96HA7 1378 aa27.54■■■□□ 2
HDAC11-205ENST00000404548 EXOC5O00471 708 aa27.53■■■□□ 2
HDAC11-205ENST00000404548 HDGFL2Q7Z4V5 671 aaPredicted RBP27.53■■■□□ 2
HDAC11-205ENST00000404548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.53■■■□□ 2
HDAC11-205ENST00000404548 SPON1Q9HCB6 807 aa27.52■■■□□ 2
HDAC11-205ENST00000404548 TERF2IPQ9NYB0 399 aa27.51■■□□□ 1.99
HDAC11-205ENST00000404548 NINLQ9Y2I6 1382 aa27.5■■□□□ 1.99
HDAC11-205ENST00000404548 KCNQ2O43526 872 aa27.5■■□□□ 1.99
HDAC11-205ENST00000404548 NME9Q86XW9 330 aa27.5■■□□□ 1.99
HDAC11-205ENST00000404548 PTF1AQ7RTS3 328 aa27.49■■□□□ 1.99
HDAC11-205ENST00000404548 TMC1Q8TDI8 760 aa27.49■■□□□ 1.99
HDAC11-205ENST00000404548 A0A1W2PP64 1363 aa27.48■■□□□ 1.99
HDAC11-205ENST00000404548 SLC12A5Q9H2X9 1139 aa27.48■■□□□ 1.99
HDAC11-205ENST00000404548 ANO8Q9HCE9 1232 aaPredicted RBP27.48■■□□□ 1.99
HDAC11-205ENST00000404548 SLC24A1O60721 1099 aa27.47■■□□□ 1.99
HDAC11-205ENST00000404548 PROM2Q8N271 834 aa27.47■■□□□ 1.99
HDAC11-205ENST00000404548 LTN1O94822 1766 aa27.47■■□□□ 1.99
HDAC11-205ENST00000404548 CASZ1Q86V15 1759 aa27.47■■□□□ 1.99
HDAC11-205ENST00000404548 NHSQ6T4R5 1651 aa27.45■■□□□ 1.98
HDAC11-205ENST00000404548 IL2RBP14784 551 aa27.43■■□□□ 1.98
HDAC11-205ENST00000404548 NLRP2Q9NX02 1062 aa27.43■■□□□ 1.98
HDAC11-205ENST00000404548 TXNRD1Q16881 649 aa27.42■■□□□ 1.98
HDAC11-205ENST00000404548 TESK2Q96S53 571 aa27.42■■□□□ 1.98
HDAC11-205ENST00000404548 PPP1R1BQ9UD71 204 aaPredicted RBP27.42■■□□□ 1.98
HDAC11-205ENST00000404548 ANKRD24Q8TF21 1146 aa27.41■■□□□ 1.98
HDAC11-205ENST00000404548 FAM208AQ9UK61 1670 aaKnown RBP27.38■■□□□ 1.97
HDAC11-205ENST00000404548 IP6K1Q92551 441 aa27.37■■□□□ 1.97
HDAC11-205ENST00000404548 STK32BQ9NY57 414 aa27.37■■□□□ 1.97
HDAC11-205ENST00000404548 ST20-MTHFSA0A0A6YYL1 179 aa27.35■■□□□ 1.97
HDAC11-205ENST00000404548 SLC15A2Q16348 729 aa27.35■■□□□ 1.97
HDAC11-205ENST00000404548 PAPPAQ13219 1627 aa27.32■■□□□ 1.96
HDAC11-205ENST00000404548 ANKRD36BQ8N2N9 1353 aa27.32■■□□□ 1.96
HDAC11-205ENST00000404548 COG3Q96JB2 828 aa27.31■■□□□ 1.96
HDAC11-205ENST00000404548 PDGFDQ9GZP0 370 aaPredicted RBP27.31■■□□□ 1.96
HDAC11-205ENST00000404548 PTGER2P43116 358 aa27.3■■□□□ 1.96
HDAC11-205ENST00000404548 DCAF8L1A6NGE4 600 aa27.29■■□□□ 1.96
HDAC11-205ENST00000404548 ACSBG1Q96GR2 724 aa27.29■■□□□ 1.96
HDAC11-205ENST00000404548 BTAF1O14981 1849 aa27.29■■□□□ 1.96
HDAC11-205ENST00000404548 RTL1A6NKG5 1358 aa27.28■■□□□ 1.96
HDAC11-205ENST00000404548 MAP3K19Q56UN5 1328 aa27.28■■□□□ 1.96
HDAC11-205ENST00000404548 ZBTB7AO95365 584 aa27.28■■□□□ 1.96
HDAC11-205ENST00000404548 UTRNP46939 3433 aa27.28■■□□□ 1.96
HDAC11-205ENST00000404548 MTFR1LQ9H019 292 aa27.27■■□□□ 1.96
HDAC11-205ENST00000404548 HOXC9P31274 260 aa27.26■■□□□ 1.95
HDAC11-205ENST00000404548 MYOM1P52179 1685 aa27.26■■□□□ 1.95
HDAC11-205ENST00000404548 YY1P25490 414 aa27.25■■□□□ 1.95
HDAC11-205ENST00000404548 SGIP1Q9BQI5 828 aa27.23■■□□□ 1.95
HDAC11-205ENST00000404548 USP47Q96K76 1375 aa27.22■■□□□ 1.95
HDAC11-205ENST00000404548 TMF1P82094 1093 aa27.22■■□□□ 1.95
HDAC11-205ENST00000404548 AMPHP49418 695 aa27.21■■□□□ 1.95
HDAC11-205ENST00000404548 SLC27A3Q5K4L6 730 aa27.21■■□□□ 1.95
HDAC11-205ENST00000404548 ATF5Q9Y2D1 282 aaPredicted RBP27.21■■□□□ 1.95
HDAC11-205ENST00000404548 LTV1Q96GA3 475 aaPredicted RBP27.2■■□□□ 1.94
HDAC11-205ENST00000404548 CDCA8Q53HL2 280 aa27.18■■□□□ 1.94
HDAC11-205ENST00000404548 DDX54Q8TDD1 881 aaKnown RBP27.18■■□□□ 1.94
HDAC11-205ENST00000404548 LRRC4BQ9NT99 713 aa27.18■■□□□ 1.94
HDAC11-205ENST00000404548 CGNL1Q0VF96 1302 aa27.17■■□□□ 1.94
HDAC11-205ENST00000404548 FYB1O15117 783 aa27.17■■□□□ 1.94
HDAC11-205ENST00000404548 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
HDAC11-205ENST00000404548 MAP3K5Q99683 1374 aa27.17■■□□□ 1.94
HDAC11-205ENST00000404548 MEGF6O75095 1541 aa27.16■■□□□ 1.94
HDAC11-205ENST00000404548 QSER1Q2KHR3 1735 aa27.16■■□□□ 1.94
HDAC11-205ENST00000404548 ZNF827Q17R98 1081 aa27.16■■□□□ 1.94
HDAC11-205ENST00000404548 KIF24Q5T7B8 1368 aa27.16■■□□□ 1.94
HDAC11-205ENST00000404548 SHANK3Q9BYB0 1731 aa27.16■■□□□ 1.94
HDAC11-205ENST00000404548 ZCRB1Q8TBF4 217 aaKnown RBP27.15■■□□□ 1.94
HDAC11-205ENST00000404548 AKT1S1Q96B36 256 aa27.15■■□□□ 1.94
HDAC11-205ENST00000404548 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms