RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
CDC42-203ENST00000400259 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
CDC42-203ENST00000400259 USP54Q70EL1 1684 aa20.23■□□□□ 0.83
CDC42-203ENST00000400259 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
CDC42-203ENST00000400259 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
CDC42-203ENST00000400259 HMOX1P09601 288 aa20.22■□□□□ 0.83
CDC42-203ENST00000400259 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
CDC42-203ENST00000400259 IGHDP01880 384 aa20.21■□□□□ 0.83
CDC42-203ENST00000400259 IPO9Q96P70 1041 aaKnown RBP20.21■□□□□ 0.83
CDC42-203ENST00000400259 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
CDC42-203ENST00000400259 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
CDC42-203ENST00000400259 TNNQ9UQP3 1299 aa20.2■□□□□ 0.82
CDC42-203ENST00000400259 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
CDC42-203ENST00000400259 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
CDC42-203ENST00000400259 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
CDC42-203ENST00000400259 SETD1BQ9UPS6 1966 aaKnown RBP20.19■□□□□ 0.82
CDC42-203ENST00000400259 MVPQ14764 893 aaKnown RBP20.19■□□□□ 0.82
CDC42-203ENST00000400259 PMFBP1Q8TBY8 1022 aa20.19■□□□□ 0.82
CDC42-203ENST00000400259 ALDH1L2Q3SY69 923 aa20.18■□□□□ 0.82
CDC42-203ENST00000400259 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
CDC42-203ENST00000400259 MARF1Q9Y4F3 1742 aaKnown RBP20.18■□□□□ 0.82
CDC42-203ENST00000400259 LMOD3Q0VAK6 560 aa20.18■□□□□ 0.82
CDC42-203ENST00000400259 NUTM2FA1L443 756 aa20.17■□□□□ 0.82
CDC42-203ENST00000400259 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
CDC42-203ENST00000400259 BRPF1P55201 1214 aaPredicted RBP20.16■□□□□ 0.82
CDC42-203ENST00000400259 IFT57Q9NWB7 429 aa20.16■□□□□ 0.82
CDC42-203ENST00000400259 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
CDC42-203ENST00000400259 KIF16BQ96L93 1317 aa20.16■□□□□ 0.82
CDC42-203ENST00000400259 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
CDC42-203ENST00000400259 TRIM27P14373 513 aa20.15■□□□□ 0.82
CDC42-203ENST00000400259 GNAI1P63096 354 aa20.15■□□□□ 0.82
CDC42-203ENST00000400259 FAM161AQ3B820 660 aa20.15■□□□□ 0.82
CDC42-203ENST00000400259 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
CDC42-203ENST00000400259 FTSJ3Q8IY81 847 aaKnown RBP20.14■□□□□ 0.81
CDC42-203ENST00000400259 PCDHB15Q9Y5E8 787 aa20.14■□□□□ 0.81
CDC42-203ENST00000400259 KCNA6P17658 529 aa20.14■□□□□ 0.81
CDC42-203ENST00000400259 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
CDC42-203ENST00000400259 C8orf34Q49A92 452 aa20.12■□□□□ 0.81
CDC42-203ENST00000400259 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
CDC42-203ENST00000400259 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
CDC42-203ENST00000400259 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
CDC42-203ENST00000400259 ARHGEF10O15013 1369 aa20.11■□□□□ 0.81
CDC42-203ENST00000400259 NGDNQ8NEJ9 315 aaKnown RBP20.1■□□□□ 0.81
CDC42-203ENST00000400259 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
CDC42-203ENST00000400259 RGS3P49796 1198 aa20.1■□□□□ 0.81
CDC42-203ENST00000400259 CFAP44Q96MT7 982 aa20.1■□□□□ 0.81
CDC42-203ENST00000400259 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
CDC42-203ENST00000400259 ANKLE2Q86XL3 938 aa20.09■□□□□ 0.81
CDC42-203ENST00000400259 RWDD1Q9H446 243 aaPredicted RBP20.09■□□□□ 0.81
CDC42-203ENST00000400259 FLT4P35916 1363 aa20.09■□□□□ 0.81
CDC42-203ENST00000400259 VAMP4O75379 141 aa20.08■□□□□ 0.81
CDC42-203ENST00000400259 MBIPQ9NS73 344 aa20.08■□□□□ 0.81
CDC42-203ENST00000400259 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.8
CDC42-203ENST00000400259 KIF24Q5T7B8 1368 aa20.08■□□□□ 0.8
CDC42-203ENST00000400259 HSP90AB2PQ58FF8 381 aa20.07■□□□□ 0.8
CDC42-203ENST00000400259 SULT6B1Q6IMI4 303 aa20.07■□□□□ 0.8
CDC42-203ENST00000400259 ZBTB47Q9UFB7 747 aaPredicted RBP20.07■□□□□ 0.8
CDC42-203ENST00000400259 LAS1LQ9Y4W2 734 aaKnown RBP20.07■□□□□ 0.8
CDC42-203ENST00000400259 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
CDC42-203ENST00000400259 ARHGAP45Q92619 1136 aa20.06■□□□□ 0.8
CDC42-203ENST00000400259 KDRP35968 1356 aa20.05■□□□□ 0.8
CDC42-203ENST00000400259 HDAC1Q13547 482 aaPredicted RBP20.05■□□□□ 0.8
CDC42-203ENST00000400259 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
CDC42-203ENST00000400259 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
CDC42-203ENST00000400259 MRPL50Q8N5N7 158 aaKnown RBP20.04■□□□□ 0.8
CDC42-203ENST00000400259 TSPYL6Q8N831 410 aa20.03■□□□□ 0.8
CDC42-203ENST00000400259 ZBTB40Q9NUA8 1239 aa20.03■□□□□ 0.8
CDC42-203ENST00000400259 FAM83GA6ND36 823 aa20.02■□□□□ 0.8
CDC42-203ENST00000400259 ADGRL3Q9HAR2 1447 aa20.02■□□□□ 0.8
CDC42-203ENST00000400259 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
CDC42-203ENST00000400259 DDRGK1Q96HY6 314 aa20.01■□□□□ 0.79
CDC42-203ENST00000400259 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
CDC42-203ENST00000400259 LTN1O94822 1766 aa20.01■□□□□ 0.79
CDC42-203ENST00000400259 NBR1Q14596 966 aa20.01■□□□□ 0.79
CDC42-203ENST00000400259 NWD1Q149M9 1564 aa20.01■□□□□ 0.79
CDC42-203ENST00000400259 IGSF1Q8N6C5 1336 aa20.01■□□□□ 0.79
CDC42-203ENST00000400259 LRRC37A3O60309 1634 aa19.99■□□□□ 0.79
CDC42-203ENST00000400259 NPHP4O75161 1426 aaPredicted RBP19.99■□□□□ 0.79
CDC42-203ENST00000400259 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
CDC42-203ENST00000400259 KIAA0232Q92628 1395 aa19.99■□□□□ 0.79
CDC42-203ENST00000400259 CHL1O00533 1208 aa19.99■□□□□ 0.79
CDC42-203ENST00000400259 NLRP6P59044 892 aa19.99■□□□□ 0.79
CDC42-203ENST00000400259 DCTN1Q14203 1278 aa19.99■□□□□ 0.79
CDC42-203ENST00000400259 CRB1P82279 1406 aa19.98■□□□□ 0.79
CDC42-203ENST00000400259 ABCC4O15439 1325 aa19.98■□□□□ 0.79
CDC42-203ENST00000400259 PHRF1Q9P1Y6 1649 aaKnown RBP19.98■□□□□ 0.79
CDC42-203ENST00000400259 SOX12O15370 315 aa19.97■□□□□ 0.79
CDC42-203ENST00000400259 AMPHP49418 695 aa19.97■□□□□ 0.79
CDC42-203ENST00000400259 CHMP4BQ9H444 224 aaKnown RBP19.97■□□□□ 0.79
CDC42-203ENST00000400259 PHF8Q9UPP1 1060 aa19.97■□□□□ 0.79
CDC42-203ENST00000400259 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
CDC42-203ENST00000400259 HAP1P54257 671 aaPredicted RBP19.96■□□□□ 0.79
CDC42-203ENST00000400259 SMC5Q8IY18 1101 aa19.96■□□□□ 0.79
CDC42-203ENST00000400259 EYA1Q99502 592 aa19.95■□□□□ 0.78
CDC42-203ENST00000400259 NFAT5O94916 1531 aa19.95■□□□□ 0.78
CDC42-203ENST00000400259 HOXC9P31274 260 aa19.94■□□□□ 0.78
CDC42-203ENST00000400259 ABTB2Q8N961 1025 aa19.93■□□□□ 0.78
CDC42-203ENST00000400259 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
CDC42-203ENST00000400259 ZBTB7BO15156 539 aaPredicted RBP19.93■□□□□ 0.78
CDC42-203ENST00000400259 MCM10Q7L590 875 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms