RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TXLNAP40222 546 aa16.37■□□□□ 0.21
VAPA-202ENST00000400000 NFKBIBQ15653 356 aa16.37■□□□□ 0.21
VAPA-202ENST00000400000 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
VAPA-202ENST00000400000 ZNF76P36508 570 aa16.37■□□□□ 0.21
VAPA-202ENST00000400000 AXDND1Q5T1B0 1012 aaPredicted RBP16.37■□□□□ 0.21
VAPA-202ENST00000400000 GNL3LQ9NVN8 582 aaKnown RBP16.37■□□□□ 0.21
VAPA-202ENST00000400000 DHX8Q14562 1220 aaKnown RBP16.36■□□□□ 0.21
VAPA-202ENST00000400000 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 AACSQ86V21 672 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 DEF6Q9H4E7 631 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 GNAI2P04899 355 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 ME1P48163 572 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 TDO2P48775 406 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 ABCF2Q9UG63 623 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 H0YHG0 523 aa16.36■□□□□ 0.21
VAPA-202ENST00000400000 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
VAPA-202ENST00000400000 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
VAPA-202ENST00000400000 WDR70Q9NW82 654 aa16.35■□□□□ 0.21
VAPA-202ENST00000400000 TAX1BP1Q86VP1 789 aa16.35■□□□□ 0.21
VAPA-202ENST00000400000 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
VAPA-202ENST00000400000 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
VAPA-202ENST00000400000 ARGLU1Q9NWB6 273 aaPredicted RBP16.35■□□□□ 0.21
VAPA-202ENST00000400000 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
VAPA-202ENST00000400000 CDR1P51861 262 aa16.34■□□□□ 0.21
VAPA-202ENST00000400000 ENOX2Q16206 610 aaKnown RBP16.34■□□□□ 0.21
VAPA-202ENST00000400000 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
VAPA-202ENST00000400000 TTC16Q8NEE8 873 aa16.34■□□□□ 0.21
VAPA-202ENST00000400000 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
VAPA-202ENST00000400000 NUTM1Q86Y26 1132 aa16.33■□□□□ 0.21
VAPA-202ENST00000400000 TSPY26PQ9H489 355 aa16.33■□□□□ 0.21
VAPA-202ENST00000400000 LIG1P18858 919 aa16.33■□□□□ 0.2
VAPA-202ENST00000400000 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
VAPA-202ENST00000400000 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.2
VAPA-202ENST00000400000 LRP2BPQ9P2M1 347 aa16.33■□□□□ 0.2
VAPA-202ENST00000400000 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
VAPA-202ENST00000400000 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
VAPA-202ENST00000400000 TRAK2O60296 914 aa16.32■□□□□ 0.2
VAPA-202ENST00000400000 NOM1Q5C9Z4 860 aaKnown RBP16.32■□□□□ 0.2
VAPA-202ENST00000400000 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
VAPA-202ENST00000400000 TSPYL1Q9H0U9 437 aa16.32■□□□□ 0.2
VAPA-202ENST00000400000 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
VAPA-202ENST00000400000 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
VAPA-202ENST00000400000 GNAI3P08754 354 aa16.32■□□□□ 0.2
VAPA-202ENST00000400000 SEPT7Q16181 437 aaKnown RBP16.32■□□□□ 0.2
VAPA-202ENST00000400000 TMX1Q9H3N1 280 aa16.32■□□□□ 0.2
VAPA-202ENST00000400000 NEBLO76041 1014 aa16.31■□□□□ 0.2
VAPA-202ENST00000400000 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
VAPA-202ENST00000400000 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
VAPA-202ENST00000400000 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 TAF3Q5VWG9 929 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
VAPA-202ENST00000400000 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
VAPA-202ENST00000400000 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 LRRCC1Q9C099 1032 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 ACBD3Q9H3P7 528 aa16.3■□□□□ 0.2
VAPA-202ENST00000400000 CALRP27797 417 aaKnown RBP16.29■□□□□ 0.2
VAPA-202ENST00000400000 PSMD1Q99460 953 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 ANKIB1Q9P2G1 1089 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 CAMK4Q16566 473 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
VAPA-202ENST00000400000 CCDC39Q9UFE4 941 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
VAPA-202ENST00000400000 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
VAPA-202ENST00000400000 CCDC181Q5TID7 509 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
VAPA-202ENST00000400000 SRGAP3O43295 1099 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 DNA2P51530 1060 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
VAPA-202ENST00000400000 GUCY1B3Q02153 619 aa16.28■□□□□ 0.2
VAPA-202ENST00000400000 RDXP35241 583 aaKnown RBP16.27■□□□□ 0.2
VAPA-202ENST00000400000 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
VAPA-202ENST00000400000 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
VAPA-202ENST00000400000 BRPF3Q9ULD4 1205 aa16.27■□□□□ 0.2
VAPA-202ENST00000400000 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
VAPA-202ENST00000400000 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
VAPA-202ENST00000400000 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.19
VAPA-202ENST00000400000 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.19
VAPA-202ENST00000400000 PPFIBP1Q86W92 1011 aa16.27■□□□□ 0.19
VAPA-202ENST00000400000 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
VAPA-202ENST00000400000 ANKLE2Q86XL3 938 aa16.26■□□□□ 0.19
VAPA-202ENST00000400000 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
VAPA-202ENST00000400000 ZNHIT6Q9NWK9 470 aaKnown RBP16.26■□□□□ 0.19
VAPA-202ENST00000400000 LARP1BQ659C4 914 aaKnown RBP16.26■□□□□ 0.19
VAPA-202ENST00000400000 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
VAPA-202ENST00000400000 ZPR1O75312 459 aa16.26■□□□□ 0.19
VAPA-202ENST00000400000 TNNT1P13805 278 aa16.25■□□□□ 0.19
VAPA-202ENST00000400000 MCM10Q7L590 875 aa16.25■□□□□ 0.19
VAPA-202ENST00000400000 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
VAPA-202ENST00000400000 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
VAPA-202ENST00000400000 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
VAPA-202ENST00000400000 ERC1Q8IUD2 1116 aa16.25■□□□□ 0.19
VAPA-202ENST00000400000 CA8P35219 290 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms