RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 PTPRGP23470 1445 aa17.03■□□□□ 0.32
TNRC18-203ENST00000399537 ERLIN1O75477 346 aa17.03■□□□□ 0.32
TNRC18-203ENST00000399537 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
TNRC18-203ENST00000399537 STK3Q13188 491 aa17.03■□□□□ 0.32
TNRC18-203ENST00000399537 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
TNRC18-203ENST00000399537 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.32
TNRC18-203ENST00000399537 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
TNRC18-203ENST00000399537 ANKRD50Q9ULJ7 1429 aa17.02■□□□□ 0.32
TNRC18-203ENST00000399537 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
TNRC18-203ENST00000399537 BACH2Q9BYV9 841 aa17.02■□□□□ 0.32
TNRC18-203ENST00000399537 CBFA2T2O43439 604 aa17.02■□□□□ 0.31
TNRC18-203ENST00000399537 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.315e-6■■□□□ 12
TNRC18-203ENST00000399537 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
TNRC18-203ENST00000399537 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.31
TNRC18-203ENST00000399537 RRP9O43818 475 aaKnown RBP17.01■□□□□ 0.31
TNRC18-203ENST00000399537 CCDC112Q8NEF3 446 aa17.01■□□□□ 0.31
TNRC18-203ENST00000399537 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
TNRC18-203ENST00000399537 ANKRD1Q15327 319 aa17.01■□□□□ 0.31
TNRC18-203ENST00000399537 DHX37Q8IY37 1157 aaKnown RBP17.01■□□□□ 0.31
TNRC18-203ENST00000399537 GNAI2P04899 355 aa17.01■□□□□ 0.31
TNRC18-203ENST00000399537 TIAM1Q13009 1591 aa17■□□□□ 0.31
TNRC18-203ENST00000399537 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
TNRC18-203ENST00000399537 SYNJ1O43426 1573 aa17■□□□□ 0.31
TNRC18-203ENST00000399537 NACAP1Q9BZK3 213 aa17■□□□□ 0.31
TNRC18-203ENST00000399537 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
TNRC18-203ENST00000399537 STK11IPQ8N1F8 1099 aa17■□□□□ 0.31
TNRC18-203ENST00000399537 TCP11L2Q8N4U5 519 aa16.99■□□□□ 0.31
TNRC18-203ENST00000399537 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
TNRC18-203ENST00000399537 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
TNRC18-203ENST00000399537 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
TNRC18-203ENST00000399537 GAS2L2Q8NHY3 880 aa16.99■□□□□ 0.31
TNRC18-203ENST00000399537 CFTRP13569 1480 aa16.99■□□□□ 0.31
TNRC18-203ENST00000399537 K7ELQ4 463 aaPredicted RBP16.98■□□□□ 0.31
TNRC18-203ENST00000399537 GGNBP2Q9H3C7 697 aa16.98■□□□□ 0.31
TNRC18-203ENST00000399537 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
TNRC18-203ENST00000399537 LRRCC1Q9C099 1032 aa16.98■□□□□ 0.31
TNRC18-203ENST00000399537 DESP17661 470 aa16.98■□□□□ 0.31
TNRC18-203ENST00000399537 NUP133Q8WUM0 1156 aa16.98■□□□□ 0.31
TNRC18-203ENST00000399537 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
TNRC18-203ENST00000399537 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
TNRC18-203ENST00000399537 WDR33Q9C0J8 1336 aaKnown RBP16.97■□□□□ 0.31
TNRC18-203ENST00000399537 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
TNRC18-203ENST00000399537 SIL1Q9H173 461 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 CDKL5O76039 1030 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
TNRC18-203ENST00000399537 KIAA1328Q86T90 577 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
TNRC18-203ENST00000399537 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
TNRC18-203ENST00000399537 NOL7Q9UMY1 257 aaKnown RBP16.96■□□□□ 0.31
TNRC18-203ENST00000399537 NEBLO76041 1014 aa16.96■□□□□ 0.31
TNRC18-203ENST00000399537 SSR1P43307 286 aaKnown RBP16.96■□□□□ 0.3
TNRC18-203ENST00000399537 ESPNB1AK53 854 aa16.95■□□□□ 0.3
TNRC18-203ENST00000399537 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.33e-6■■□□□ 14.5
TNRC18-203ENST00000399537 KRT85P78386 507 aa16.95■□□□□ 0.3
TNRC18-203ENST00000399537 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
TNRC18-203ENST00000399537 NLRP6P59044 892 aa16.95■□□□□ 0.3
TNRC18-203ENST00000399537 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
TNRC18-203ENST00000399537 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNRC18-203ENST00000399537 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
TNRC18-203ENST00000399537 MTHFSP49914 203 aa16.95■□□□□ 0.3
TNRC18-203ENST00000399537 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
TNRC18-203ENST00000399537 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
TNRC18-203ENST00000399537 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
TNRC18-203ENST00000399537 JAKMIP3Q5VZ66 844 aa16.94■□□□□ 0.3
TNRC18-203ENST00000399537 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
TNRC18-203ENST00000399537 GCC1Q96CN9 775 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
TNRC18-203ENST00000399537 ERBINQ96RT1 1412 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 C9orf84Q5VXU9 1444 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 CCDC91Q7Z6B0 441 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 CEP57L1Q8IYX8 460 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 SPATA32Q96LK8 384 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 CCDC102AQ96A19 550 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
TNRC18-203ENST00000399537 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
TNRC18-203ENST00000399537 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
TNRC18-203ENST00000399537 CCDC97Q96F63 343 aaPredicted RBP16.92■□□□□ 0.3
TNRC18-203ENST00000399537 BCAR3O75815 825 aa16.92■□□□□ 0.3
TNRC18-203ENST00000399537 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
TNRC18-203ENST00000399537 TAF4BQ92750 862 aa16.92■□□□□ 0.3
TNRC18-203ENST00000399537 LARP1BQ659C4 914 aaKnown RBP16.92■□□□□ 0.3
TNRC18-203ENST00000399537 MPHOSPH8Q99549 860 aa16.92■□□□□ 0.3
TNRC18-203ENST00000399537 AACSQ86V21 672 aa16.91■□□□□ 0.3
TNRC18-203ENST00000399537 TRIM21P19474 475 aaKnown RBP16.91■□□□□ 0.3
TNRC18-203ENST00000399537 TDO2P48775 406 aa16.91■□□□□ 0.3
TNRC18-203ENST00000399537 EXOSC9Q06265 439 aaKnown RBP16.91■□□□□ 0.3
TNRC18-203ENST00000399537 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
TNRC18-203ENST00000399537 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
TNRC18-203ENST00000399537 TAF3Q5VWG9 929 aa16.91■□□□□ 0.3
TNRC18-203ENST00000399537 UBAC1Q9BSL1 405 aa16.91■□□□□ 0.3
TNRC18-203ENST00000399537 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
TNRC18-203ENST00000399537 MCM4P33991 863 aa16.91■□□□□ 0.3
TNRC18-203ENST00000399537 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
TNRC18-203ENST00000399537 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
TNRC18-203ENST00000399537 USP8P40818 1118 aa16.9■□□□□ 0.3
TNRC18-203ENST00000399537 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
TNRC18-203ENST00000399537 ZNF76P36508 570 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms