RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ADGRB1O14514 1584 aa16.98■□□□□ 0.31
SMIM11A-201ENST00000399292 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
SMIM11A-201ENST00000399292 DLC1Q96QB1 1528 aa16.97■□□□□ 0.31
SMIM11A-201ENST00000399292 NEUROD1Q13562 356 aa16.97■□□□□ 0.31
SMIM11A-201ENST00000399292 PNPLA6Q8IY17 1366 aa16.97■□□□□ 0.31
SMIM11A-201ENST00000399292 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
SMIM11A-201ENST00000399292 LRP6O75581 1613 aa16.96■□□□□ 0.31
SMIM11A-201ENST00000399292 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.31
SMIM11A-201ENST00000399292 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
SMIM11A-201ENST00000399292 L3MBTL2Q969R5 705 aa16.95■□□□□ 0.3
SMIM11A-201ENST00000399292 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
SMIM11A-201ENST00000399292 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
SMIM11A-201ENST00000399292 MINK1Q8N4C8 1332 aaPredicted RBP16.95■□□□□ 0.3
SMIM11A-201ENST00000399292 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
SMIM11A-201ENST00000399292 KRT28Q7Z3Y7 464 aa16.93■□□□□ 0.3
SMIM11A-201ENST00000399292 SPNS2Q8IVW8 549 aa16.93■□□□□ 0.3
SMIM11A-201ENST00000399292 WASLO00401 505 aaPredicted RBP16.92■□□□□ 0.3
SMIM11A-201ENST00000399292 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
SMIM11A-201ENST00000399292 PSME1Q06323 249 aa16.92■□□□□ 0.3
SMIM11A-201ENST00000399292 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
SMIM11A-201ENST00000399292 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 KRTAP3-3Q9BYR6 98 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 KRTAP3-2Q9BYR7 98 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 PXDNQ92626 1479 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 AFF2P51816 1311 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
SMIM11A-201ENST00000399292 ERBB3P21860 1342 aa16.89■□□□□ 0.29
SMIM11A-201ENST00000399292 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
SMIM11A-201ENST00000399292 ANKARQ7Z5J8 1434 aa16.88■□□□□ 0.29
SMIM11A-201ENST00000399292 SPATA31A3Q5VYP0 1347 aa16.88■□□□□ 0.29
SMIM11A-201ENST00000399292 RXRBP28702 533 aa16.86■□□□□ 0.29
SMIM11A-201ENST00000399292 GPR153Q6NV75 609 aa16.86■□□□□ 0.29
SMIM11A-201ENST00000399292 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
SMIM11A-201ENST00000399292 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
SMIM11A-201ENST00000399292 KIF3CO14782 793 aa16.85■□□□□ 0.29
SMIM11A-201ENST00000399292 MMRN1Q13201 1228 aa16.85■□□□□ 0.29
SMIM11A-201ENST00000399292 PRR36Q9H6K5 1346 aa16.85■□□□□ 0.29
SMIM11A-201ENST00000399292 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
SMIM11A-201ENST00000399292 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
SMIM11A-201ENST00000399292 HS6ST3Q8IZP7 471 aa16.84■□□□□ 0.29
SMIM11A-201ENST00000399292 NUDT16Q96DE0 195 aaKnown RBP16.84■□□□□ 0.29
SMIM11A-201ENST00000399292 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
SMIM11A-201ENST00000399292 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
SMIM11A-201ENST00000399292 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
SMIM11A-201ENST00000399292 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
SMIM11A-201ENST00000399292 GPRASP1Q5JY77 1395 aa16.82■□□□□ 0.28
SMIM11A-201ENST00000399292 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
SMIM11A-201ENST00000399292 C2orf72A6NCS6 295 aa16.82■□□□□ 0.28
SMIM11A-201ENST00000399292 FNBP4Q8N3X1 1017 aaPredicted RBP16.82■□□□□ 0.28
SMIM11A-201ENST00000399292 USP21Q9UK80 565 aa16.82■□□□□ 0.28
SMIM11A-201ENST00000399292 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
SMIM11A-201ENST00000399292 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
SMIM11A-201ENST00000399292 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
SMIM11A-201ENST00000399292 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
SMIM11A-201ENST00000399292 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 RGPD8O14715 1765 aaPredicted RBP16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 USP32Q8NFA0 1604 aa16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 PPP1R37O75864 691 aa16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
SMIM11A-201ENST00000399292 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
SMIM11A-201ENST00000399292 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
SMIM11A-201ENST00000399292 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
SMIM11A-201ENST00000399292 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
SMIM11A-201ENST00000399292 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
SMIM11A-201ENST00000399292 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
SMIM11A-201ENST00000399292 ARSIQ5FYB1 569 aa16.77■□□□□ 0.28
SMIM11A-201ENST00000399292 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
SMIM11A-201ENST00000399292 ATP7BP35670 1465 aa16.75■□□□□ 0.27
SMIM11A-201ENST00000399292 ACEP12821 1306 aa16.74■□□□□ 0.27
SMIM11A-201ENST00000399292 TMC2Q8TDI7 906 aa16.73■□□□□ 0.27
SMIM11A-201ENST00000399292 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
SMIM11A-201ENST00000399292 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
SMIM11A-201ENST00000399292 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
SMIM11A-201ENST00000399292 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
SMIM11A-201ENST00000399292 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
SMIM11A-201ENST00000399292 TRPM1Q7Z4N2 1603 aa16.71■□□□□ 0.27
SMIM11A-201ENST00000399292 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
SMIM11A-201ENST00000399292 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
SMIM11A-201ENST00000399292 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
SMIM11A-201ENST00000399292 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
SMIM11A-201ENST00000399292 ATRNO75882 1429 aa16.7■□□□□ 0.26
SMIM11A-201ENST00000399292 ZNF687Q8N1G0 1237 aa16.69■□□□□ 0.26
SMIM11A-201ENST00000399292 KHSRPQ92945 711 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMIM11A-201ENST00000399292 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
SMIM11A-201ENST00000399292 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
SMIM11A-201ENST00000399292 SLIT2O94813 1529 aa16.67■□□□□ 0.26
SMIM11A-201ENST00000399292 SLC34A2O95436 690 aa16.67■□□□□ 0.26
SMIM11A-201ENST00000399292 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
SMIM11A-201ENST00000399292 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
SMIM11A-201ENST00000399292 RGS12O14924 1447 aa16.66■□□□□ 0.26
SMIM11A-201ENST00000399292 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
SMIM11A-201ENST00000399292 UPF1Q92900 1129 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMIM11A-201ENST00000399292 TRPM3Q9HCF6 1732 aaPredicted RBP16.66■□□□□ 0.26
SMIM11A-201ENST00000399292 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
SMIM11A-201ENST00000399292 MARF1Q9Y4F3 1742 aaKnown RBP16.65■□□□□ 0.26
SMIM11A-201ENST00000399292 ZNF316A6NFI3 1004 aaPredicted RBP16.64■□□□□ 0.25
SMIM11A-201ENST00000399292 VPS72Q15906 364 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms