RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 BAG4O95429 457 aaKnown RBP17.36■□□□□ 0.37
APOB-202ENST00000399256 ALDH1L2Q3SY69 923 aa17.36■□□□□ 0.37
APOB-202ENST00000399256 PPLO60437 1756 aa17.36■□□□□ 0.37
APOB-202ENST00000399256 ANP32BQ92688 251 aaKnown RBP17.36■□□□□ 0.37
APOB-202ENST00000399256 PPP1R9BQ96SB3 815 aa17.36■□□□□ 0.37
APOB-202ENST00000399256 ZBTB7BO15156 539 aaPredicted RBP17.36■□□□□ 0.37
APOB-202ENST00000399256 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
APOB-202ENST00000399256 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
APOB-202ENST00000399256 NCLP19338 710 aaKnown RBP17.35■□□□□ 0.37
APOB-202ENST00000399256 KLHL40Q2TBA0 621 aa17.35■□□□□ 0.37
APOB-202ENST00000399256 ZSCAN30Q86W11 494 aa17.35■□□□□ 0.37
APOB-202ENST00000399256 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
APOB-202ENST00000399256 FBXO31Q5XUX0 539 aaPredicted RBP17.34■□□□□ 0.37
APOB-202ENST00000399256 MCTP1Q6DN14 999 aa17.34■□□□□ 0.37
APOB-202ENST00000399256 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.37
APOB-202ENST00000399256 SIRT2Q8IXJ6 389 aa17.33■□□□□ 0.37
APOB-202ENST00000399256 STK26Q9P289 416 aa17.33■□□□□ 0.37
APOB-202ENST00000399256 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.36
APOB-202ENST00000399256 MED14O60244 1454 aa17.33■□□□□ 0.36
APOB-202ENST00000399256 CDC45O75419 566 aa17.32■□□□□ 0.36
APOB-202ENST00000399256 AK9Q5TCS8 1911 aa17.32■□□□□ 0.36
APOB-202ENST00000399256 ELL2O00472 640 aaPredicted RBP17.32■□□□□ 0.36
APOB-202ENST00000399256 FYB1O15117 783 aa17.32■□□□□ 0.36
APOB-202ENST00000399256 CAVIN1Q6NZI2 390 aaKnown RBP17.32■□□□□ 0.36
APOB-202ENST00000399256 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
APOB-202ENST00000399256 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
APOB-202ENST00000399256 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
APOB-202ENST00000399256 ARHGEF28Q8N1W1 1705 aaKnown RBP17.31■□□□□ 0.36
APOB-202ENST00000399256 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
APOB-202ENST00000399256 IDI1Q13907 227 aa17.3■□□□□ 0.36
APOB-202ENST00000399256 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
APOB-202ENST00000399256 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
APOB-202ENST00000399256 TSPYL6Q8N831 410 aa17.3■□□□□ 0.36
APOB-202ENST00000399256 PRKAR2BP31323 418 aa17.3■□□□□ 0.36
APOB-202ENST00000399256 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
APOB-202ENST00000399256 OFD1O75665 1012 aa17.29■□□□□ 0.36
APOB-202ENST00000399256 PKP1Q13835 747 aa17.29■□□□□ 0.36
APOB-202ENST00000399256 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
APOB-202ENST00000399256 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
APOB-202ENST00000399256 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
APOB-202ENST00000399256 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
APOB-202ENST00000399256 VAMP4O75379 141 aa17.28■□□□□ 0.36
APOB-202ENST00000399256 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
APOB-202ENST00000399256 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
APOB-202ENST00000399256 FBLN1P23142 703 aa17.28■□□□□ 0.36
APOB-202ENST00000399256 RBM10P98175 930 aaKnown RBP17.28■□□□□ 0.36
APOB-202ENST00000399256 PDCL3Q9H2J4 239 aa17.28■□□□□ 0.36
APOB-202ENST00000399256 ZNF445P59923 1031 aa17.27■□□□□ 0.36
APOB-202ENST00000399256 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.36
APOB-202ENST00000399256 RABEP1Q15276 862 aa17.27■□□□□ 0.35
APOB-202ENST00000399256 RBSNQ9H1K0 784 aa17.27■□□□□ 0.35
APOB-202ENST00000399256 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.35
APOB-202ENST00000399256 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
APOB-202ENST00000399256 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
APOB-202ENST00000399256 LMBRD1Q9NUN5 540 aa17.26■□□□□ 0.35
APOB-202ENST00000399256 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
APOB-202ENST00000399256 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
APOB-202ENST00000399256 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
APOB-202ENST00000399256 HMOX1P09601 288 aa17.26■□□□□ 0.35
APOB-202ENST00000399256 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
APOB-202ENST00000399256 R3HCC1Q9Y3T6 440 aaKnown RBP17.26■□□□□ 0.35
APOB-202ENST00000399256 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 RBM27Q9P2N5 1060 aaKnown RBP17.25■□□□□ 0.35
APOB-202ENST00000399256 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
APOB-202ENST00000399256 FCHSD2O94868 740 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 NUCB2P80303 420 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
APOB-202ENST00000399256 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
APOB-202ENST00000399256 PIK3R4Q99570 1358 aa17.24■□□□□ 0.35
APOB-202ENST00000399256 ARHGAP45Q92619 1136 aa17.24■□□□□ 0.35
APOB-202ENST00000399256 ABCC4O15439 1325 aa17.24■□□□□ 0.35
APOB-202ENST00000399256 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
APOB-202ENST00000399256 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
APOB-202ENST00000399256 CYP2E1P05181 493 aaPredicted RBP17.23■□□□□ 0.35
APOB-202ENST00000399256 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
APOB-202ENST00000399256 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
APOB-202ENST00000399256 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
APOB-202ENST00000399256 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
APOB-202ENST00000399256 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
APOB-202ENST00000399256 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
APOB-202ENST00000399256 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
APOB-202ENST00000399256 FAM135BQ49AJ0 1406 aa17.22■□□□□ 0.35
APOB-202ENST00000399256 C3P01024 1663 aa17.22■□□□□ 0.35
APOB-202ENST00000399256 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
APOB-202ENST00000399256 NFE2L2Q16236 605 aa17.21■□□□□ 0.35
APOB-202ENST00000399256 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
APOB-202ENST00000399256 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
APOB-202ENST00000399256 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
APOB-202ENST00000399256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
APOB-202ENST00000399256 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
APOB-202ENST00000399256 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.21■□□□□ 0.35
APOB-202ENST00000399256 PRAM1Q96QH2 718 aa17.21■□□□□ 0.34
APOB-202ENST00000399256 APBB1O00213 710 aa17.2■□□□□ 0.34
APOB-202ENST00000399256 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
APOB-202ENST00000399256 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
APOB-202ENST00000399256 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
APOB-202ENST00000399256 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms