RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.3■■■□□ 2.76
COL13A1-203ENST00000398969 MFAP1P55081 439 aaKnown RBP32.29■■■□□ 2.76
COL13A1-203ENST00000398969 THEMISQ8N1K5 641 aaPredicted RBP32.29■■■□□ 2.76
COL13A1-203ENST00000398969 PPIP5K1Q6PFW1 1433 aa32.28■■■□□ 2.76
COL13A1-203ENST00000398969 FBLN1P23142 703 aa32.27■■■□□ 2.76
COL13A1-203ENST00000398969 BRPF1P55201 1214 aaPredicted RBP32.26■■■□□ 2.75
COL13A1-203ENST00000398969 ZNF428Q96B54 188 aa32.26■■■□□ 2.75
COL13A1-203ENST00000398969 ROBO2Q9HCK4 1378 aa32.26■■■□□ 2.75
COL13A1-203ENST00000398969 NUCB1Q02818 461 aa32.24■■■□□ 2.75
COL13A1-203ENST00000398969 SLC26A8Q96RN1 970 aa32.24■■■□□ 2.75
COL13A1-203ENST00000398969 NFE2L2Q16236 605 aa32.23■■■□□ 2.75
COL13A1-203ENST00000398969 PHACTR3Q96KR7 559 aa32.23■■■□□ 2.75
COL13A1-203ENST00000398969 MAP2P11137 1827 aaKnown RBP32.22■■■□□ 2.75
COL13A1-203ENST00000398969 HMOX1P09601 288 aa32.2■■■□□ 2.74
COL13A1-203ENST00000398969 RIMS1Q86UR5 1692 aaKnown RBP32.19■■■□□ 2.74
COL13A1-203ENST00000398969 NUDT16Q96DE0 195 aaKnown RBP32.18■■■□□ 2.74
COL13A1-203ENST00000398969 TBX22Q9Y458 520 aa32.18■■■□□ 2.74
COL13A1-203ENST00000398969 PTPRUQ92729 1446 aa32.18■■■□□ 2.74
COL13A1-203ENST00000398969 VAMP4O75379 141 aa32.17■■■□□ 2.74
COL13A1-203ENST00000398969 SPRYD3Q8NCJ5 442 aa32.17■■■□□ 2.74
COL13A1-203ENST00000398969 CALD1Q05682 793 aaKnown RBP32.17■■■□□ 2.74
COL13A1-203ENST00000398969 THUMPD2Q9BTF0 503 aaKnown RBP32.17■■■□□ 2.74
COL13A1-203ENST00000398969 CPSF1Q10570 1443 aaKnown RBP32.17■■■□□ 2.74
COL13A1-203ENST00000398969 CHD1LQ86WJ1 897 aa32.16■■■□□ 2.74
COL13A1-203ENST00000398969 MRPL50Q8N5N7 158 aaKnown RBP32.16■■■□□ 2.74
COL13A1-203ENST00000398969 LNPKQ9C0E8 428 aa32.16■■■□□ 2.74
COL13A1-203ENST00000398969 EMILIN1Q9Y6C2 1016 aa32.16■■■□□ 2.74
COL13A1-203ENST00000398969 EDC4Q6P2E9 1401 aaKnown RBP32.16■■■□□ 2.74
COL13A1-203ENST00000398969 PTCH1Q13635 1447 aa32.16■■■□□ 2.74
COL13A1-203ENST00000398969 PIK3R4Q99570 1358 aa32.15■■■□□ 2.74
COL13A1-203ENST00000398969 CCDC61Q9Y6R9 512 aa32.15■■■□□ 2.74
COL13A1-203ENST00000398969 CDK12Q9NYV4 1490 aaPredicted RBP32.15■■■□□ 2.74
COL13A1-203ENST00000398969 IL13P35225 146 aa32.15■■■□□ 2.74
COL13A1-203ENST00000398969 ARHGAP45Q92619 1136 aa32.15■■■□□ 2.74
COL13A1-203ENST00000398969 CEP170BQ9Y4F5 1589 aaPredicted RBP32.14■■■□□ 2.74
COL13A1-203ENST00000398969 ZBTB7BO15156 539 aaPredicted RBP32.14■■■□□ 2.74
COL13A1-203ENST00000398969 IFT57Q9NWB7 429 aa32.14■■■□□ 2.74
COL13A1-203ENST00000398969 GNAI1P63096 354 aa32.13■■■□□ 2.73
COL13A1-203ENST00000398969 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.13■■■□□ 2.73
COL13A1-203ENST00000398969 TSPYL6Q8N831 410 aa32.12■■■□□ 2.73
COL13A1-203ENST00000398969 ZNF853P0CG23 659 aa32.11■■■□□ 2.73
COL13A1-203ENST00000398969 NME9Q86XW9 330 aa32.11■■■□□ 2.73
COL13A1-203ENST00000398969 CHMP5Q9NZZ3 219 aa32.11■■■□□ 2.73
COL13A1-203ENST00000398969 AMOTL2Q9Y2J4 779 aa32.11■■■□□ 2.73
COL13A1-203ENST00000398969 CHMP4BQ9H444 224 aaKnown RBP32.11■■■□□ 2.73
COL13A1-203ENST00000398969 NCKAP5LQ9HCH0 1330 aa32.1■■■□□ 2.73
COL13A1-203ENST00000398969 RBM25P49756 843 aaKnown RBP32.1■■■□□ 2.73
COL13A1-203ENST00000398969 ADAMTSL3P82987 1691 aa32.1■■■□□ 2.73
COL13A1-203ENST00000398969 MBIPQ9NS73 344 aa32.1■■■□□ 2.73
COL13A1-203ENST00000398969 AATKQ6ZMQ8 1374 aa32.1■■■□□ 2.73
COL13A1-203ENST00000398969 DIP2AQ14689 1571 aa32.09■■■□□ 2.73
COL13A1-203ENST00000398969 PRR36Q9H6K5 1346 aa32.09■■■□□ 2.73
COL13A1-203ENST00000398969 HSCBQ8IWL3 235 aa32.09■■■□□ 2.73
COL13A1-203ENST00000398969 MCM4P33991 863 aa32.08■■■□□ 2.73
COL13A1-203ENST00000398969 BMP2KLQ5H9B9 411 aa32.08■■■□□ 2.73
COL13A1-203ENST00000398969 GCC1Q96CN9 775 aa32.08■■■□□ 2.73
COL13A1-203ENST00000398969 ZRANB1Q9UGI0 708 aa32.07■■■□□ 2.72
COL13A1-203ENST00000398969 ABCC4O15439 1325 aa32.07■■■□□ 2.72
COL13A1-203ENST00000398969 C1orf115Q9H7X2 142 aa32.06■■■□□ 2.72
COL13A1-203ENST00000398969 ANKRD45Q5TZF3 282 aa32.05■■■□□ 2.72
COL13A1-203ENST00000398969 ELL2O00472 640 aaPredicted RBP32.04■■■□□ 2.72
COL13A1-203ENST00000398969 DLG5Q8TDM6 1919 aa32.04■■■□□ 2.72
COL13A1-203ENST00000398969 NCOA3Q9Y6Q9 1424 aa32.04■■■□□ 2.72
COL13A1-203ENST00000398969 TWISTNBQ3B726 338 aaPredicted RBP32.03■■■□□ 2.72
COL13A1-203ENST00000398969 MON2Q7Z3U7 1717 aa32.02■■■□□ 2.72
COL13A1-203ENST00000398969 LMOD3Q0VAK6 560 aa32.02■■■□□ 2.72
COL13A1-203ENST00000398969 L1TD1Q5T7N2 865 aaKnown RBP32.02■■■□□ 2.72
COL13A1-203ENST00000398969 CFAP44Q96MT7 982 aa32.02■■■□□ 2.72
COL13A1-203ENST00000398969 ZNF692Q9BU19 519 aaPredicted RBP32.02■■■□□ 2.72
COL13A1-203ENST00000398969 SNX21Q969T3 373 aa32.01■■■□□ 2.72
COL13A1-203ENST00000398969 SIRT2Q8IXJ6 389 aa32.01■■■□□ 2.71
COL13A1-203ENST00000398969 COG3Q96JB2 828 aa32.01■■■□□ 2.71
COL13A1-203ENST00000398969 AKAP12Q02952 1782 aa32■■■□□ 2.71
COL13A1-203ENST00000398969 C8orf58Q8NAV2 365 aa32■■■□□ 2.71
COL13A1-203ENST00000398969 RRS1Q15050 365 aaKnown RBP31.98■■■□□ 2.71
COL13A1-203ENST00000398969 ITSN1Q15811 1721 aa31.98■■■□□ 2.71
COL13A1-203ENST00000398969 ZNF142P52746 1687 aaPredicted RBP31.97■■■□□ 2.71
COL13A1-203ENST00000398969 DDIT3P35638 169 aa31.97■■■□□ 2.71
COL13A1-203ENST00000398969 ANO8Q9HCE9 1232 aaPredicted RBP31.97■■■□□ 2.71
COL13A1-203ENST00000398969 API5Q9BZZ5 524 aaKnown RBP31.96■■■□□ 2.71
COL13A1-203ENST00000398969 XRN1Q8IZH2 1706 aaKnown RBP31.96■■■□□ 2.71
COL13A1-203ENST00000398969 SETD1BQ9UPS6 1966 aaKnown RBP31.96■■■□□ 2.71
COL13A1-203ENST00000398969 TOPAZ1Q8N9V7 1692 aa31.96■■■□□ 2.71
COL13A1-203ENST00000398969 FAM43AQ8N2R8 423 aa31.96■■■□□ 2.71
COL13A1-203ENST00000398969 FAM83GA6ND36 823 aa31.95■■■□□ 2.71
COL13A1-203ENST00000398969 NUTM2FA1L443 756 aa31.95■■■□□ 2.7
COL13A1-203ENST00000398969 ANKLE2Q86XL3 938 aa31.95■■■□□ 2.7
COL13A1-203ENST00000398969 PLEKHG3A1L390 1219 aa31.94■■■□□ 2.7
COL13A1-203ENST00000398969 KIF2CQ99661 725 aa31.92■■■□□ 2.7
COL13A1-203ENST00000398969 TBC1D9Q6ZT07 1266 aa31.91■■■□□ 2.7
COL13A1-203ENST00000398969 ACEP12821 1306 aa31.91■■■□□ 2.7
COL13A1-203ENST00000398969 FSD2A1L4K1 749 aa31.91■■■□□ 2.7
COL13A1-203ENST00000398969 TRAK2O60296 914 aa31.91■■■□□ 2.7
COL13A1-203ENST00000398969 KCNA6P17658 529 aa31.91■■■□□ 2.7
COL13A1-203ENST00000398969 DCTN1Q14203 1278 aa31.91■■■□□ 2.7
COL13A1-203ENST00000398969 NRKQ7Z2Y5 1582 aa31.9■■■□□ 2.7
COL13A1-203ENST00000398969 KIF24Q5T7B8 1368 aa31.9■■■□□ 2.7
COL13A1-203ENST00000398969 GOLGA6L3A6NEY3 463 aa31.88■■■□□ 2.69
COL13A1-203ENST00000398969 GZF1Q9H116 711 aaPredicted RBP31.88■■■□□ 2.69
COL13A1-203ENST00000398969 DDX11L8A8MPP1 907 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms