RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ABCC6O95255 1503 aa25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 EIF4A2Q14240 407 aaKnown RBP25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 LMOD2Q6P5Q4 547 aa25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 NGEFQ8N5V2 710 aa25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 U2SURPO15042 1029 aaKnown RBP25.84■■□□□ 1.73
PDLIM2-205ENST00000397761 HOXC9P31274 260 aa25.84■■□□□ 1.73
PDLIM2-205ENST00000397761 AMPHP49418 695 aa25.84■■□□□ 1.73
PDLIM2-205ENST00000397761 CCDC146Q8IYE0 955 aa25.84■■□□□ 1.73
PDLIM2-205ENST00000397761 ARHGEF25Q86VW2 580 aa25.83■■□□□ 1.73
PDLIM2-205ENST00000397761 FCHSD2O94868 740 aa25.82■■□□□ 1.72
PDLIM2-205ENST00000397761 HSPA1LP34931 641 aa25.82■■□□□ 1.72
PDLIM2-205ENST00000397761 PLEKHF1Q96S99 279 aa25.82■■□□□ 1.72
PDLIM2-205ENST00000397761 COL22A1Q8NFW1 1626 aaPredicted RBP25.81■■□□□ 1.72
PDLIM2-205ENST00000397761 NCBP3Q53F19 620 aaKnown RBP25.81■■□□□ 1.72
PDLIM2-205ENST00000397761 IP6K1Q92551 441 aa25.81■■□□□ 1.72
PDLIM2-205ENST00000397761 PHLPP1O60346 1717 aa25.81■■□□□ 1.72
PDLIM2-205ENST00000397761 RSPH6AQ9H0K4 717 aa25.79■■□□□ 1.72
PDLIM2-205ENST00000397761 COL16A1Q07092 1604 aaPredicted RBP25.79■■□□□ 1.72
PDLIM2-205ENST00000397761 RGPD2P0DJD1 1756 aa25.79■■□□□ 1.72
PDLIM2-205ENST00000397761 ZNF521Q96K83 1311 aa25.79■■□□□ 1.72
PDLIM2-205ENST00000397761 APAF1O14727 1248 aa25.79■■□□□ 1.72
PDLIM2-205ENST00000397761 PNNQ9H307 717 aaKnown RBP25.79■■□□□ 1.72
PDLIM2-205ENST00000397761 CPDO75976 1380 aa25.78■■□□□ 1.72
PDLIM2-205ENST00000397761 DLG5Q8TDM6 1919 aa25.78■■□□□ 1.72
PDLIM2-205ENST00000397761 CAMTA1Q9Y6Y1 1673 aa25.77■■□□□ 1.72
PDLIM2-205ENST00000397761 KDRP35968 1356 aa25.75■■□□□ 1.71
PDLIM2-205ENST00000397761 SENP3-EIF4A1A0A087X0R7 540 aa25.75■■□□□ 1.71
PDLIM2-205ENST00000397761 PDE3BQ13370 1112 aa25.75■■□□□ 1.71
PDLIM2-205ENST00000397761 TCP11L2Q8N4U5 519 aa25.75■■□□□ 1.71
PDLIM2-205ENST00000397761 FAM208AQ9UK61 1670 aaKnown RBP25.75■■□□□ 1.71
PDLIM2-205ENST00000397761 IGSF1Q8N6C5 1336 aa25.74■■□□□ 1.71
PDLIM2-205ENST00000397761 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
PDLIM2-205ENST00000397761 LMO7Q8WWI1 1683 aa25.72■■□□□ 1.71
PDLIM2-205ENST00000397761 CABLES1Q8TDN4 633 aa25.72■■□□□ 1.71
PDLIM2-205ENST00000397761 LRRC59Q96AG4 307 aaKnown RBP25.72■■□□□ 1.71
PDLIM2-205ENST00000397761 NCAPD2Q15021 1401 aa25.71■■□□□ 1.71
PDLIM2-205ENST00000397761 PRKAR2BP31323 418 aa25.71■■□□□ 1.71
PDLIM2-205ENST00000397761 CCDC27Q2M243 656 aa25.71■■□□□ 1.71
PDLIM2-205ENST00000397761 HMOX1P09601 288 aa25.7■■□□□ 1.7
PDLIM2-205ENST00000397761 EYA1Q99502 592 aa25.7■■□□□ 1.7
PDLIM2-205ENST00000397761 MAPK8IP3Q9UPT6 1336 aa25.69■■□□□ 1.7
PDLIM2-205ENST00000397761 SALL2Q9Y467 1007 aaPredicted RBP25.69■■□□□ 1.7
PDLIM2-205ENST00000397761 TMPOP42166 694 aaKnown RBP25.67■■□□□ 1.7
PDLIM2-205ENST00000397761 ZC3H6P61129 1189 aaKnown RBP25.67■■□□□ 1.7
PDLIM2-205ENST00000397761 SULT6B1Q6IMI4 303 aa25.67■■□□□ 1.7
PDLIM2-205ENST00000397761 AEBP1Q8IUX7 1158 aa25.67■■□□□ 1.7
PDLIM2-205ENST00000397761 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
PDLIM2-205ENST00000397761 PLEKHG5O94827 1062 aa25.66■■□□□ 1.7
PDLIM2-205ENST00000397761 PHACTR3Q96KR7 559 aa25.66■■□□□ 1.7
PDLIM2-205ENST00000397761 AXIN2Q9Y2T1 843 aa25.66■■□□□ 1.7
PDLIM2-205ENST00000397761 WWC1Q8IX03 1113 aa25.65■■□□□ 1.7
PDLIM2-205ENST00000397761 NEFMP07197 916 aa25.63■■□□□ 1.69
PDLIM2-205ENST00000397761 RRP7AQ9Y3A4 280 aaKnown RBP25.63■■□□□ 1.69
PDLIM2-205ENST00000397761 ERBB3P21860 1342 aa25.63■■□□□ 1.69
PDLIM2-205ENST00000397761 ZBTB7CA1YPR0 619 aa25.62■■□□□ 1.69
PDLIM2-205ENST00000397761 GOLGA2Q08379 1002 aa25.61■■□□□ 1.69
PDLIM2-205ENST00000397761 NFE2L2Q16236 605 aa25.61■■□□□ 1.69
PDLIM2-205ENST00000397761 ANKRD24Q8TF21 1146 aa25.61■■□□□ 1.69
PDLIM2-205ENST00000397761 LTV1Q96GA3 475 aaPredicted RBP25.61■■□□□ 1.69
PDLIM2-205ENST00000397761 COL14A1Q05707 1796 aaKnown RBP25.61■■□□□ 1.69
PDLIM2-205ENST00000397761 NBPF6Q5VWK0 638 aa25.6■■□□□ 1.69
PDLIM2-205ENST00000397761 CDCA7LQ96GN5 454 aa25.6■■□□□ 1.69
PDLIM2-205ENST00000397761 NBPF4Q96M43 638 aa25.6■■□□□ 1.69
PDLIM2-205ENST00000397761 TRIM35Q9UPQ4 493 aa25.6■■□□□ 1.69
PDLIM2-205ENST00000397761 WDR63Q8IWG1 891 aa25.6■■□□□ 1.69
PDLIM2-205ENST00000397761 TRMT2AQ8IZ69 625 aaKnown RBP25.6■■□□□ 1.69
PDLIM2-205ENST00000397761 NEUROD2Q15784 382 aa25.59■■□□□ 1.69
PDLIM2-205ENST00000397761 SLFN5Q08AF3 891 aa25.58■■□□□ 1.69
PDLIM2-205ENST00000397761 RIPK4P57078 832 aa25.57■■□□□ 1.68
PDLIM2-205ENST00000397761 PRDM11Q9NQV5 511 aa25.57■■□□□ 1.68
PDLIM2-205ENST00000397761 CHRNA2Q15822 529 aa25.56■■□□□ 1.68
PDLIM2-205ENST00000397761 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-205ENST00000397761 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
PDLIM2-205ENST00000397761 DUSP27Q5VZP5 1158 aa25.54■■□□□ 1.68
PDLIM2-205ENST00000397761 VIRMAQ69YN4 1812 aaKnown RBP25.54■■□□□ 1.68
PDLIM2-205ENST00000397761 E9PSI1 815 aa25.53■■□□□ 1.68
PDLIM2-205ENST00000397761 PLEKHG2Q9H7P9 1386 aa25.53■■□□□ 1.68
PDLIM2-205ENST00000397761 SPINK5Q9NQ38 1064 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-205ENST00000397761 IL16Q14005 1332 aa25.52■■□□□ 1.68
PDLIM2-205ENST00000397761 PLCH1Q4KWH8 1693 aa25.52■■□□□ 1.68
PDLIM2-205ENST00000397761 LMOD3Q0VAK6 560 aa25.51■■□□□ 1.67
PDLIM2-205ENST00000397761 USHBP1Q8N6Y0 703 aa25.51■■□□□ 1.67
PDLIM2-205ENST00000397761 LRRC37A3O60309 1634 aa25.49■■□□□ 1.67
PDLIM2-205ENST00000397761 FAM83GA6ND36 823 aa25.49■■□□□ 1.67
PDLIM2-205ENST00000397761 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
PDLIM2-205ENST00000397761 WDR17Q8IZU2 1322 aa25.49■■□□□ 1.67
PDLIM2-205ENST00000397761 MTHFSDQ2M296 383 aaKnown RBP25.48■■□□□ 1.67
PDLIM2-205ENST00000397761 GAS2L2Q8NHY3 880 aa25.48■■□□□ 1.67
PDLIM2-205ENST00000397761 PARP4Q9UKK3 1724 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-205ENST00000397761 NWD2Q9ULI1 1742 aa25.47■■□□□ 1.67
PDLIM2-205ENST00000397761 NRAPQ86VF7 1730 aa25.47■■□□□ 1.67
PDLIM2-205ENST00000397761 JCADQ9P266 1359 aa25.45■■□□□ 1.66
PDLIM2-205ENST00000397761 NLRP2Q9NX02 1062 aa25.44■■□□□ 1.66
PDLIM2-205ENST00000397761 ADAMTS7Q9UKP4 1686 aa25.43■■□□□ 1.66
PDLIM2-205ENST00000397761 HTATSF1O43719 755 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-205ENST00000397761 CALD1Q05682 793 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-205ENST00000397761 MYH16Q9H6N6 1097 aa25.42■■□□□ 1.66
PDLIM2-205ENST00000397761 CSB-PGBD3P0DP91 1061 aa25.41■■□□□ 1.66
PDLIM2-205ENST00000397761 WNK3Q9BYP7 1800 aa25.41■■□□□ 1.66
PDLIM2-205ENST00000397761 RNF123Q5XPI4 1314 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms