RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 HOXC9P31274 260 aa18.69■□□□□ 0.58
PPARG-205ENST00000397010 BLMP54132 1417 aaPredicted RBP18.69■□□□□ 0.58
PPARG-205ENST00000397010 RTL1A6NKG5 1358 aa18.69■□□□□ 0.58
PPARG-205ENST00000397010 HNRNPUQ00839 825 aaKnown RBP eCLIP18.68■□□□□ 0.58
PPARG-205ENST00000397010 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
PPARG-205ENST00000397010 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
PPARG-205ENST00000397010 U2AF1L5P0DN76 240 aaPredicted RBP18.67■□□□□ 0.58
PPARG-205ENST00000397010 IL13P35225 146 aa18.67■□□□□ 0.58
PPARG-205ENST00000397010 U2AF1Q01081 240 aaKnown RBP eCLIP18.67■□□□□ 0.58
PPARG-205ENST00000397010 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
PPARG-205ENST00000397010 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
PPARG-205ENST00000397010 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
PPARG-205ENST00000397010 HAP1P54257 671 aaPredicted RBP18.66■□□□□ 0.58
PPARG-205ENST00000397010 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
PPARG-205ENST00000397010 LTV1Q96GA3 475 aaPredicted RBP18.65■□□□□ 0.58
PPARG-205ENST00000397010 IP6K1Q92551 441 aa18.64■□□□□ 0.58
PPARG-205ENST00000397010 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
PPARG-205ENST00000397010 LMO7Q8WWI1 1683 aa18.63■□□□□ 0.57
PPARG-205ENST00000397010 CPDO75976 1380 aa18.62■□□□□ 0.57
PPARG-205ENST00000397010 HMOX1P09601 288 aa18.62■□□□□ 0.57
PPARG-205ENST00000397010 AXIN2Q9Y2T1 843 aa18.62■□□□□ 0.57
PPARG-205ENST00000397010 ABCC6O95255 1503 aa18.61■□□□□ 0.57
PPARG-205ENST00000397010 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
PPARG-205ENST00000397010 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
PPARG-205ENST00000397010 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
PPARG-205ENST00000397010 FAM208AQ9UK61 1670 aaKnown RBP18.59■□□□□ 0.57
PPARG-205ENST00000397010 CAMTA1Q9Y6Y1 1673 aa18.59■□□□□ 0.57
PPARG-205ENST00000397010 PLCH1Q4KWH8 1693 aa18.58■□□□□ 0.57
PPARG-205ENST00000397010 HSPA1LP34931 641 aa18.58■□□□□ 0.56
PPARG-205ENST00000397010 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
PPARG-205ENST00000397010 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
PPARG-205ENST00000397010 ANKRD24Q8TF21 1146 aa18.57■□□□□ 0.56
PPARG-205ENST00000397010 EYA1Q99502 592 aa18.57■□□□□ 0.56
PPARG-205ENST00000397010 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
PPARG-205ENST00000397010 SULT6B1Q6IMI4 303 aa18.57■□□□□ 0.56
PPARG-205ENST00000397010 ERBB3P21860 1342 aa18.56■□□□□ 0.56
PPARG-205ENST00000397010 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
PPARG-205ENST00000397010 PRKAR2BP31323 418 aa18.56■□□□□ 0.56
PPARG-205ENST00000397010 USHBP1Q8N6Y0 703 aa18.56■□□□□ 0.56
PPARG-205ENST00000397010 NUTM2BA6NNL0 878 aaPredicted RBP18.56■□□□□ 0.56
PPARG-205ENST00000397010 NUTM2EB1AL46 878 aaPredicted RBP18.56■□□□□ 0.56
PPARG-205ENST00000397010 APAF1O14727 1248 aa18.56■□□□□ 0.56
PPARG-205ENST00000397010 NUTM2AQ8IVF1 878 aaPredicted RBP18.56■□□□□ 0.56
PPARG-205ENST00000397010 RUNDC1Q96C34 613 aa18.56■□□□□ 0.56
PPARG-205ENST00000397010 JCADQ9P266 1359 aa18.55■□□□□ 0.56
PPARG-205ENST00000397010 PLEKHF1Q96S99 279 aa18.55■□□□□ 0.56
PPARG-205ENST00000397010 ADAMTS2O95450 1211 aa18.54■□□□□ 0.56
PPARG-205ENST00000397010 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
PPARG-205ENST00000397010 COL5A2P05997 1499 aaPredicted RBP18.54■□□□□ 0.56
PPARG-205ENST00000397010 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
PPARG-205ENST00000397010 FCHSD2O94868 740 aa18.54■□□□□ 0.56
PPARG-205ENST00000397010 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
PPARG-205ENST00000397010 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
PPARG-205ENST00000397010 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
PPARG-205ENST00000397010 KDRP35968 1356 aa18.53■□□□□ 0.56
PPARG-205ENST00000397010 MAPK8IP3Q9UPT6 1336 aa18.53■□□□□ 0.56
PPARG-205ENST00000397010 NEUROD2Q15784 382 aa18.52■□□□□ 0.55
PPARG-205ENST00000397010 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.55
PPARG-205ENST00000397010 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.55
PPARG-205ENST00000397010 NRAPQ86VF7 1730 aa18.51■□□□□ 0.55
PPARG-205ENST00000397010 CSB-PGBD3P0DP91 1061 aa18.5■□□□□ 0.55
PPARG-205ENST00000397010 LRP6O75581 1613 aa18.5■□□□□ 0.55
PPARG-205ENST00000397010 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
PPARG-205ENST00000397010 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
PPARG-205ENST00000397010 STRN4Q9NRL3 753 aa18.49■□□□□ 0.55
PPARG-205ENST00000397010 NLRP2Q9NX02 1062 aa18.49■□□□□ 0.55
PPARG-205ENST00000397010 BTG4Q9NY30 223 aa18.49■□□□□ 0.55
PPARG-205ENST00000397010 NWD2Q9ULI1 1742 aa18.48■□□□□ 0.55
PPARG-205ENST00000397010 NEFMP07197 916 aa18.47■□□□□ 0.55
PPARG-205ENST00000397010 WDR17Q8IZU2 1322 aa18.47■□□□□ 0.55
PPARG-205ENST00000397010 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
PPARG-205ENST00000397010 TMPOP42166 694 aaKnown RBP18.46■□□□□ 0.55
PPARG-205ENST00000397010 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
PPARG-205ENST00000397010 LARP1Q6PKG0 1096 aaKnown RBP18.45■□□□□ 0.54
PPARG-205ENST00000397010 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
PPARG-205ENST00000397010 EVA1CP58658 441 aa18.44■□□□□ 0.54
PPARG-205ENST00000397010 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
PPARG-205ENST00000397010 PARP4Q9UKK3 1724 aaKnown RBP18.44■□□□□ 0.54
PPARG-205ENST00000397010 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
PPARG-205ENST00000397010 MEGF6O75095 1541 aa18.43■□□□□ 0.54
PPARG-205ENST00000397010 NFE2L2Q16236 605 aa18.43■□□□□ 0.54
PPARG-205ENST00000397010 ZNF521Q96K83 1311 aa18.42■□□□□ 0.54
PPARG-205ENST00000397010 RIPK4P57078 832 aa18.42■□□□□ 0.54
PPARG-205ENST00000397010 SLIT2O94813 1529 aa18.42■□□□□ 0.54
PPARG-205ENST00000397010 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
PPARG-205ENST00000397010 CRB1P82279 1406 aa18.42■□□□□ 0.54
PPARG-205ENST00000397010 MTHFSDQ2M296 383 aaKnown RBP18.41■□□□□ 0.54
PPARG-205ENST00000397010 PKD1L3Q7Z443 1732 aa18.41■□□□□ 0.54
PPARG-205ENST00000397010 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
PPARG-205ENST00000397010 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
PPARG-205ENST00000397010 USP35Q9P2H5 1018 aa18.4■□□□□ 0.54
PPARG-205ENST00000397010 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
PPARG-205ENST00000397010 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
PPARG-205ENST00000397010 SHANK3Q9BYB0 1731 aa18.39■□□□□ 0.53
PPARG-205ENST00000397010 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.38■□□□□ 0.53
PPARG-205ENST00000397010 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
PPARG-205ENST00000397010 NGEFQ8N5V2 710 aa18.38■□□□□ 0.53
PPARG-205ENST00000397010 RAPGEF4Q8WZA2 1011 aa18.38■□□□□ 0.53
PPARG-205ENST00000397010 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
PPARG-205ENST00000397010 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms