RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
RTFDC1-203ENST00000395881 CDCA7LQ96GN5 454 aa18.97■□□□□ 0.63
RTFDC1-203ENST00000395881 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 PIK3C2AO00443 1686 aa18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 PLCH1Q4KWH8 1693 aa18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 SOCS7O14512 581 aa18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 IRX6P78412 446 aaPredicted RBP18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 RUNDC1Q96C34 613 aa18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
RTFDC1-203ENST00000395881 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 SENP3-EIF4A1A0A087X0R7 540 aa18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 RXRBP28702 533 aa18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 TNNT2P45379 298 aaPredicted RBP18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 TRMT2AQ8IZ69 625 aaKnown RBP18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 ATRNO75882 1429 aa18.95■□□□□ 0.62
RTFDC1-203ENST00000395881 USP19O94966 1318 aa18.94■□□□□ 0.62
RTFDC1-203ENST00000395881 APAF1O14727 1248 aa18.94■□□□□ 0.62
RTFDC1-203ENST00000395881 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
RTFDC1-203ENST00000395881 NWD2Q9ULI1 1742 aa18.94■□□□□ 0.62
RTFDC1-203ENST00000395881 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 COL14A1Q05707 1796 aaKnown RBP18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 NLRP6P59044 892 aa18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 SLFN5Q08AF3 891 aa18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 DUSP27Q5VZP5 1158 aa18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 UNC5CLQ8IV45 518 aa18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
RTFDC1-203ENST00000395881 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
RTFDC1-203ENST00000395881 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
RTFDC1-203ENST00000395881 E9PSI1 815 aa18.91■□□□□ 0.62
RTFDC1-203ENST00000395881 ZC3H6P61129 1189 aaKnown RBP18.91■□□□□ 0.62
RTFDC1-203ENST00000395881 KIAA0232Q92628 1395 aa18.91■□□□□ 0.62
RTFDC1-203ENST00000395881 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
RTFDC1-203ENST00000395881 NRAPQ86VF7 1730 aa18.9■□□□□ 0.62
RTFDC1-203ENST00000395881 GCP02774 474 aa18.89■□□□□ 0.62
RTFDC1-203ENST00000395881 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.62
RTFDC1-203ENST00000395881 SLIT3O75094 1523 aa18.89■□□□□ 0.61
RTFDC1-203ENST00000395881 CDK12Q9NYV4 1490 aaPredicted RBP18.89■□□□□ 0.61
RTFDC1-203ENST00000395881 CHRNA2Q15822 529 aa18.89■□□□□ 0.61
RTFDC1-203ENST00000395881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.61
RTFDC1-203ENST00000395881 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
RTFDC1-203ENST00000395881 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
RTFDC1-203ENST00000395881 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
RTFDC1-203ENST00000395881 GJD4Q96KN9 370 aaPredicted RBP18.87■□□□□ 0.61
RTFDC1-203ENST00000395881 CPDO75976 1380 aa18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 NME9Q86XW9 330 aa18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 RGS12O14924 1447 aa18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 GLI3P10071 1580 aa18.86■□□□□ 0.61
RTFDC1-203ENST00000395881 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 VPS72Q15906 364 aa18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 USP54Q70EL1 1684 aa18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 USP31Q70CQ4 1352 aa18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 DIAPH1O60610 1272 aaKnown RBP18.85■□□□□ 0.61
RTFDC1-203ENST00000395881 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
RTFDC1-203ENST00000395881 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
RTFDC1-203ENST00000395881 COG3Q96JB2 828 aa18.83■□□□□ 0.6
RTFDC1-203ENST00000395881 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
RTFDC1-203ENST00000395881 COL18A1P39060 1754 aa18.82■□□□□ 0.6
RTFDC1-203ENST00000395881 PLEKHF1Q96S99 279 aa18.81■□□□□ 0.6
RTFDC1-203ENST00000395881 NFAT5O94916 1531 aa18.81■□□□□ 0.6
RTFDC1-203ENST00000395881 SOX12O15370 315 aa18.81■□□□□ 0.6
RTFDC1-203ENST00000395881 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.81■□□□□ 0.6
RTFDC1-203ENST00000395881 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
RTFDC1-203ENST00000395881 FCHSD2O94868 740 aa18.8■□□□□ 0.6
RTFDC1-203ENST00000395881 KCNH5Q8NCM2 988 aa18.8■□□□□ 0.6
RTFDC1-203ENST00000395881 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
RTFDC1-203ENST00000395881 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
RTFDC1-203ENST00000395881 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
RTFDC1-203ENST00000395881 ARHGEF25Q86VW2 580 aa18.79■□□□□ 0.6
RTFDC1-203ENST00000395881 RGPD5Q99666 1765 aa18.78■□□□□ 0.6
RTFDC1-203ENST00000395881 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
RTFDC1-203ENST00000395881 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
RTFDC1-203ENST00000395881 B4GALNT3Q6L9W6 998 aa18.78■□□□□ 0.6
RTFDC1-203ENST00000395881 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
RTFDC1-203ENST00000395881 STRN4Q9NRL3 753 aa18.78■□□□□ 0.6
RTFDC1-203ENST00000395881 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
RTFDC1-203ENST00000395881 ONECUT3O60422 494 aaPredicted RBP18.77■□□□□ 0.6
RTFDC1-203ENST00000395881 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
RTFDC1-203ENST00000395881 BRWD3Q6RI45 1802 aa18.77■□□□□ 0.6
RTFDC1-203ENST00000395881 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.59
RTFDC1-203ENST00000395881 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
RTFDC1-203ENST00000395881 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
RTFDC1-203ENST00000395881 EVA1CP58658 441 aa18.76■□□□□ 0.59
RTFDC1-203ENST00000395881 IL16Q14005 1332 aa18.75■□□□□ 0.59
RTFDC1-203ENST00000395881 LARP1Q6PKG0 1096 aaKnown RBP18.75■□□□□ 0.59
RTFDC1-203ENST00000395881 MYH16Q9H6N6 1097 aa18.75■□□□□ 0.59
RTFDC1-203ENST00000395881 LTN1O94822 1766 aa18.75■□□□□ 0.59
RTFDC1-203ENST00000395881 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
RTFDC1-203ENST00000395881 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
RTFDC1-203ENST00000395881 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
RTFDC1-203ENST00000395881 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
RTFDC1-203ENST00000395881 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
RTFDC1-203ENST00000395881 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms