RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
CXCL12-205ENST00000395794 BAG6P46379 1132 aa19.24■□□□□ 0.67
CXCL12-205ENST00000395794 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
CXCL12-205ENST00000395794 FAM182BQ5T319 152 aa19.24■□□□□ 0.67
CXCL12-205ENST00000395794 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
CXCL12-205ENST00000395794 NME9Q86XW9 330 aa19.24■□□□□ 0.67
CXCL12-205ENST00000395794 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
CXCL12-205ENST00000395794 CD163L1Q9NR16 1453 aa19.23■□□□□ 0.67
CXCL12-205ENST00000395794 A0A1W2PP64 1363 aa19.23■□□□□ 0.67
CXCL12-205ENST00000395794 USP31Q70CQ4 1352 aa19.23■□□□□ 0.67
CXCL12-205ENST00000395794 CSB-PGBD3P0DP91 1061 aa19.23■□□□□ 0.67
CXCL12-205ENST00000395794 DEFB132Q7Z7B7 95 aa19.23■□□□□ 0.67
CXCL12-205ENST00000395794 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
CXCL12-205ENST00000395794 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
CXCL12-205ENST00000395794 WDR17Q8IZU2 1322 aa19.21■□□□□ 0.67
CXCL12-205ENST00000395794 C11orf95C9JLR9 678 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-205ENST00000395794 CDCA7Q9BWT1 371 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-205ENST00000395794 NFAT5O94916 1531 aa19.17■□□□□ 0.66
CXCL12-205ENST00000395794 COG3Q96JB2 828 aa19.17■□□□□ 0.66
CXCL12-205ENST00000395794 TRIM37O94972 964 aa19.16■□□□□ 0.66
CXCL12-205ENST00000395794 DDB1Q16531 1140 aa19.16■□□□□ 0.66
CXCL12-205ENST00000395794 CARD10Q9BWT7 1032 aa19.16■□□□□ 0.66
CXCL12-205ENST00000395794 ANKRD36BQ8N2N9 1353 aa19.16■□□□□ 0.66
CXCL12-205ENST00000395794 COL18A1P39060 1754 aa19.14■□□□□ 0.66
CXCL12-205ENST00000395794 EN1Q05925 392 aaPredicted RBP19.14■□□□□ 0.65
CXCL12-205ENST00000395794 ABCC6O95255 1503 aa19.14■□□□□ 0.65
CXCL12-205ENST00000395794 APBA3O96018 575 aa19.13■□□□□ 0.65
CXCL12-205ENST00000395794 RGPD1P0DJD0 1748 aa19.13■□□□□ 0.65
CXCL12-205ENST00000395794 CCDC7Q96M83 1385 aa19.12■□□□□ 0.65
CXCL12-205ENST00000395794 NLRP2Q9NX02 1062 aa19.12■□□□□ 0.65
CXCL12-205ENST00000395794 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
CXCL12-205ENST00000395794 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
CXCL12-205ENST00000395794 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
CXCL12-205ENST00000395794 ERBB3P21860 1342 aa19.1■□□□□ 0.65
CXCL12-205ENST00000395794 EXOC5O00471 708 aa19.1■□□□□ 0.65
CXCL12-205ENST00000395794 ANKRD24Q8TF21 1146 aa19.1■□□□□ 0.65
CXCL12-205ENST00000395794 OVOS2A0A0G2JMS6 1433 aa19.09■□□□□ 0.65
CXCL12-205ENST00000395794 PARP4Q9UKK3 1724 aaKnown RBP19.09■□□□□ 0.65
CXCL12-205ENST00000395794 DISP2A7MBM2 1401 aa19.08■□□□□ 0.65
CXCL12-205ENST00000395794 AMPHP49418 695 aa19.08■□□□□ 0.64
CXCL12-205ENST00000395794 EIF4G2P78344 907 aaKnown RBP eCLIP19.08■□□□□ 0.64
CXCL12-205ENST00000395794 IP6K1Q92551 441 aa19.08■□□□□ 0.64
CXCL12-205ENST00000395794 EZH2Q15910 746 aaKnown RBP19.07■□□□□ 0.64
CXCL12-205ENST00000395794 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
CXCL12-205ENST00000395794 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
CXCL12-205ENST00000395794 FYB1O15117 783 aa19.06■□□□□ 0.64
CXCL12-205ENST00000395794 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
CXCL12-205ENST00000395794 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
CXCL12-205ENST00000395794 CACNB1Q02641 598 aaPredicted RBP19.05■□□□□ 0.64
CXCL12-205ENST00000395794 LTV1Q96GA3 475 aaPredicted RBP19.05■□□□□ 0.64
CXCL12-205ENST00000395794 CAMKK2Q96RR4 588 aa19.05■□□□□ 0.64
CXCL12-205ENST00000395794 MAP3K19Q56UN5 1328 aa19.04■□□□□ 0.64
CXCL12-205ENST00000395794 LTN1O94822 1766 aa19.04■□□□□ 0.64
CXCL12-205ENST00000395794 IL2RBP14784 551 aa19.04■□□□□ 0.64
CXCL12-205ENST00000395794 MARCH10Q8NA82 808 aaPredicted RBP19.04■□□□□ 0.64
CXCL12-205ENST00000395794 LRRC37A3O60309 1634 aa19.03■□□□□ 0.64
CXCL12-205ENST00000395794 TNS1Q9HBL0 1735 aaKnown RBP19.03■□□□□ 0.64
CXCL12-205ENST00000395794 PSDA5PKW4 1024 aaPredicted RBP19.03■□□□□ 0.64
CXCL12-205ENST00000395794 HOXC9P31274 260 aa19.02■□□□□ 0.64
CXCL12-205ENST00000395794 BCL11BQ9C0K0 894 aaPredicted RBP19.02■□□□□ 0.64
CXCL12-205ENST00000395794 HSPA5P11021 654 aaKnown RBP19.01■□□□□ 0.63
CXCL12-205ENST00000395794 FBLN1P23142 703 aa19.01■□□□□ 0.63
CXCL12-205ENST00000395794 NBPF14Q5TI25 921 aa19.01■□□□□ 0.63
CXCL12-205ENST00000395794 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
CXCL12-205ENST00000395794 CARD14Q9BXL6 1004 aa19■□□□□ 0.63
CXCL12-205ENST00000395794 TNS2Q63HR2 1409 aa19■□□□□ 0.63
CXCL12-205ENST00000395794 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
CXCL12-205ENST00000395794 RTL1A6NKG5 1358 aa18.99■□□□□ 0.63
CXCL12-205ENST00000395794 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
CXCL12-205ENST00000395794 WNK3Q9BYP7 1800 aa18.99■□□□□ 0.63
CXCL12-205ENST00000395794 BCL9O00512 1426 aa18.99■□□□□ 0.63
CXCL12-205ENST00000395794 CGNL1Q0VF96 1302 aa18.98■□□□□ 0.63
CXCL12-205ENST00000395794 PLSCR1O15162 318 aa18.97■□□□□ 0.63
CXCL12-205ENST00000395794 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
CXCL12-205ENST00000395794 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
CXCL12-205ENST00000395794 DDX54Q8TDD1 881 aaKnown RBP18.94■□□□□ 0.62
CXCL12-205ENST00000395794 MYOM1P52179 1685 aa18.94■□□□□ 0.62
CXCL12-205ENST00000395794 KIF24Q5T7B8 1368 aa18.93■□□□□ 0.62
CXCL12-205ENST00000395794 FAM208AQ9UK61 1670 aaKnown RBP18.93■□□□□ 0.62
CXCL12-205ENST00000395794 KIF20BQ96Q89 1820 aa18.93■□□□□ 0.62
CXCL12-205ENST00000395794 FLT4P35916 1363 aa18.93■□□□□ 0.62
CXCL12-205ENST00000395794 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
CXCL12-205ENST00000395794 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
CXCL12-205ENST00000395794 ACSBG1Q96GR2 724 aa18.92■□□□□ 0.62
CXCL12-205ENST00000395794 SRCAPQ6ZRS2 3230 aa18.92■□□□□ 0.62
CXCL12-205ENST00000395794 INSRP06213 1382 aa18.92■□□□□ 0.62
CXCL12-205ENST00000395794 HSP90AB2PQ58FF8 381 aa18.91■□□□□ 0.62
CXCL12-205ENST00000395794 RAPGEF4Q8WZA2 1011 aa18.91■□□□□ 0.62
CXCL12-205ENST00000395794 KCNQ2O43526 872 aa18.9■□□□□ 0.62
CXCL12-205ENST00000395794 NBPF6Q5VWK0 638 aa18.9■□□□□ 0.62
CXCL12-205ENST00000395794 NBPF4Q96M43 638 aa18.9■□□□□ 0.62
CXCL12-205ENST00000395794 PANK3Q9H999 370 aa18.9■□□□□ 0.62
CXCL12-205ENST00000395794 ZCRB1Q8TBF4 217 aaKnown RBP18.89■□□□□ 0.61
CXCL12-205ENST00000395794 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
CXCL12-205ENST00000395794 TATP17735 454 aaPredicted RBP18.88■□□□□ 0.61
CXCL12-205ENST00000395794 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
CXCL12-205ENST00000395794 RREB1Q92766 1687 aa18.88■□□□□ 0.61
CXCL12-205ENST00000395794 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
CXCL12-205ENST00000395794 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
CXCL12-205ENST00000395794 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms