RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 ANAPC15P60006 121 aa14.47□□□□□ -0.09
SIN3A-202ENST00000394947 MACROD2A1Z1Q3 448 aa14.47□□□□□ -0.09
SIN3A-202ENST00000394947 ATF3P18847 181 aa14.47□□□□□ -0.09
SIN3A-202ENST00000394947 SCLT1Q96NL6 688 aa14.47□□□□□ -0.09
SIN3A-202ENST00000394947 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
SIN3A-202ENST00000394947 UBA5Q9GZZ9 404 aa14.47□□□□□ -0.09
SIN3A-202ENST00000394947 DDX11Q96FC9 970 aa14.46□□□□□ -0.09
SIN3A-202ENST00000394947 IPO4Q8TEX9 1081 aaKnown RBP14.46□□□□□ -0.09
SIN3A-202ENST00000394947 TERF1P54274 439 aa14.46□□□□□ -0.09
SIN3A-202ENST00000394947 SLC4A8Q2Y0W8 1093 aa14.46□□□□□ -0.09
SIN3A-202ENST00000394947 CCDC178Q5BJE1 867 aa14.46□□□□□ -0.09
SIN3A-202ENST00000394947 SOGA3Q5TF21 947 aa14.45□□□□□ -0.1
SIN3A-202ENST00000394947 LETM1O95202 739 aaPredicted RBP14.45□□□□□ -0.1
SIN3A-202ENST00000394947 TMCO5BA8MYB1 307 aa14.45□□□□□ -0.1
SIN3A-202ENST00000394947 STIM1Q13586 685 aa14.45□□□□□ -0.1
SIN3A-202ENST00000394947 POLR3GO15318 223 aaPredicted RBP14.45□□□□□ -0.1
SIN3A-202ENST00000394947 CCDC158Q5M9N0 1113 aa14.45□□□□□ -0.1
SIN3A-202ENST00000394947 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
SIN3A-202ENST00000394947 CCDC144AA2RUR9 1427 aa14.45□□□□□ -0.1
SIN3A-202ENST00000394947 CCP110O43303 1012 aa14.44□□□□□ -0.1
SIN3A-202ENST00000394947 EIF5P55010 431 aaKnown RBP14.44□□□□□ -0.1
SIN3A-202ENST00000394947 KLHL10Q6JEL2 608 aa14.44□□□□□ -0.1
SIN3A-202ENST00000394947 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
SIN3A-202ENST00000394947 CDCA7LQ96GN5 454 aa14.44□□□□□ -0.1
SIN3A-202ENST00000394947 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
SIN3A-202ENST00000394947 TMEM132EQ6IEE7 984 aa14.44□□□□□ -0.1
SIN3A-202ENST00000394947 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
SIN3A-202ENST00000394947 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
SIN3A-202ENST00000394947 RAI14Q9P0K7 980 aa14.43□□□□□ -0.1
SIN3A-202ENST00000394947 COMMD10Q9Y6G5 202 aa14.43□□□□□ -0.1
SIN3A-202ENST00000394947 TSR2Q969E8 191 aaKnown RBP14.43□□□□□ -0.1
SIN3A-202ENST00000394947 INCENPQ9NQS7 918 aa14.43□□□□□ -0.1
SIN3A-202ENST00000394947 PDZRN3Q9UPQ7 1066 aa14.43□□□□□ -0.1
SIN3A-202ENST00000394947 CWC27Q6UX04 472 aaKnown RBP14.43□□□□□ -0.1
SIN3A-202ENST00000394947 USP47Q96K76 1375 aa14.43□□□□□ -0.1
SIN3A-202ENST00000394947 CA8P35219 290 aa14.43□□□□□ -0.1
SIN3A-202ENST00000394947 CCDC192P0DO97 292 aa14.42□□□□□ -0.1
SIN3A-202ENST00000394947 GNAI1P63096 354 aa14.42□□□□□ -0.1
SIN3A-202ENST00000394947 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
SIN3A-202ENST00000394947 FMN1Q68DA7 1419 aa14.42□□□□□ -0.1
SIN3A-202ENST00000394947 BCAR3O75815 825 aa14.42□□□□□ -0.1
SIN3A-202ENST00000394947 SMC1AQ14683 1233 aaKnown RBP14.42□□□□□ -0.1
SIN3A-202ENST00000394947 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
SIN3A-202ENST00000394947 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
SIN3A-202ENST00000394947 TDO2P48775 406 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
SIN3A-202ENST00000394947 TMCO3Q6UWJ1 677 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 GUCY1B3Q02153 619 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 NLRP6P59044 892 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 ESCO1Q5FWF5 840 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 ERC1Q8IUD2 1116 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 TAF4BQ92750 862 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 CCDC82Q8N4S0 544 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 ATP2C2O75185 946 aa14.41□□□□□ -0.1
SIN3A-202ENST00000394947 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
SIN3A-202ENST00000394947 CCDC91Q7Z6B0 441 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 JAKMIP3Q5VZ66 844 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 CPLX3Q8WVH0 158 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.4□□□□□ -0.1
SIN3A-202ENST00000394947 EPB41L2O43491 1005 aaKnown RBP14.4□□□□□ -0.1
SIN3A-202ENST00000394947 TRIM22Q8IYM9 498 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 SPATA32Q96LK8 384 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 CEP57L1Q8IYX8 460 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 ERLIN1O75477 346 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 PIP4K2BP78356 416 aa14.4□□□□□ -0.1
SIN3A-202ENST00000394947 RABEP1Q15276 862 aa14.39□□□□□ -0.11
SIN3A-202ENST00000394947 GSTTP1A0A1W2PQM5 241 aa14.39□□□□□ -0.11
SIN3A-202ENST00000394947 CARMIL2Q6F5E8 1435 aa14.39□□□□□ -0.11
SIN3A-202ENST00000394947 SPTY2D1Q68D10 685 aaPredicted RBP14.39□□□□□ -0.11
SIN3A-202ENST00000394947 LUC7LQ9NQ29 371 aaKnown RBP14.39□□□□□ -0.11
SIN3A-202ENST00000394947 CFAP100Q494V2 611 aa14.39□□□□□ -0.11
SIN3A-202ENST00000394947 CCDC30Q5VVM6 783 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 JAKMIP1Q96N16 626 aaKnown RBP14.38□□□□□ -0.11
SIN3A-202ENST00000394947 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 PPFIA3O75145 1194 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 MMRN2Q9H8L6 949 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 EXOSC9Q06265 439 aaKnown RBP14.38□□□□□ -0.11
SIN3A-202ENST00000394947 AACSQ86V21 672 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 SLC26A8Q96RN1 970 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.38□□□□□ -0.11
SIN3A-202ENST00000394947 DACH1Q9UI36 760 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 VGFO15240 615 aaPredicted RBP14.38□□□□□ -0.11
SIN3A-202ENST00000394947 IFFO1Q0D2I5 559 aa14.38□□□□□ -0.11
SIN3A-202ENST00000394947 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
SIN3A-202ENST00000394947 TRMT1Q9NXH9 659 aaKnown RBP14.38□□□□□ -0.11
SIN3A-202ENST00000394947 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 CASQ1P31415 396 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 RSPH4AQ5TD94 716 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 IL1RAPL2Q9NP60 686 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 ISM2Q6H9L7 571 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 GNL3LQ9NVN8 582 aaKnown RBP14.37□□□□□ -0.11
SIN3A-202ENST00000394947 MPHOSPH8Q99549 860 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 UPF3BQ9BZI7 483 aaKnown RBP14.37□□□□□ -0.11
SIN3A-202ENST00000394947 FHOD3Q2V2M9 1422 aa14.37□□□□□ -0.11
SIN3A-202ENST00000394947 SYCE3A1L190 88 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms