RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 RRP9O43818 475 aaKnown RBP18.1■□□□□ 0.49
PTGFRN-201ENST00000393203 ABTB2Q8N961 1025 aa18.1■□□□□ 0.49
PTGFRN-201ENST00000393203 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
PTGFRN-201ENST00000393203 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 GAS2L2Q8NHY3 880 aa18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 FAM193AP78312 1265 aa18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 CBX1P83916 185 aa18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 AEBP1Q8IUX7 1158 aa18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
PTGFRN-201ENST00000393203 HIP1O00291 1037 aa18.08■□□□□ 0.49
PTGFRN-201ENST00000393203 RRS1Q15050 365 aaKnown RBP18.08■□□□□ 0.49
PTGFRN-201ENST00000393203 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.49
PTGFRN-201ENST00000393203 TTC39AQ5SRH9 613 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 NUP62CLQ9H1M0 184 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 CCP110O43303 1012 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 DDX11Q96FC9 970 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 MAGEC2Q9UBF1 373 aaPredicted RBP18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 TBC1D2BQ9UPU7 963 aa18.08■□□□□ 0.48
PTGFRN-201ENST00000393203 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 AACSQ86V21 672 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 ODF2Q5BJF6 829 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 ARHGAP5Q13017 1502 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.483e-7■■■■■ 36.6
PTGFRN-201ENST00000393203 MYL6BP14649 208 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 SSFA2P28290 1259 aa18.07■□□□□ 0.48
PTGFRN-201ENST00000393203 RDXP35241 583 aaKnown RBP18.06■□□□□ 0.48
PTGFRN-201ENST00000393203 UPF3BQ9BZI7 483 aaKnown RBP18.06■□□□□ 0.48
PTGFRN-201ENST00000393203 CT47B1P0C2W7 299 aaPredicted RBP18.06■□□□□ 0.48
PTGFRN-201ENST00000393203 CCT4P50991 539 aaKnown RBP18.06■□□□□ 0.48
PTGFRN-201ENST00000393203 PLCD4Q9BRC7 762 aa18.06■□□□□ 0.48
PTGFRN-201ENST00000393203 SRGAP3O43295 1099 aa18.06■□□□□ 0.48
PTGFRN-201ENST00000393203 CASTP20810 708 aaKnown RBP18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 ERC1Q8IUD2 1116 aa18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 PPFIBP1Q86W92 1011 aa18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 TBC1D2Q9BYX2 928 aa18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 SRCIN1Q9C0H9 1055 aa18.05■□□□□ 0.48
PTGFRN-201ENST00000393203 BLOC1S2Q6QNY1 142 aa18.04■□□□□ 0.48
PTGFRN-201ENST00000393203 HSP90AB3PQ58FF7 597 aa18.04■□□□□ 0.48
PTGFRN-201ENST00000393203 IKQ13123 557 aaPredicted RBP18.04■□□□□ 0.48
PTGFRN-201ENST00000393203 CCDC83Q8IWF9 413 aa18.04■□□□□ 0.48
PTGFRN-201ENST00000393203 NUP133Q8WUM0 1156 aa18.04■□□□□ 0.48
PTGFRN-201ENST00000393203 CENPHQ9H3R5 247 aa18.03■□□□□ 0.48
PTGFRN-201ENST00000393203 CDK5RAP3Q96JB5 506 aa18.03■□□□□ 0.48
PTGFRN-201ENST00000393203 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
PTGFRN-201ENST00000393203 FKBP4Q02790 459 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTGFRN-201ENST00000393203 ANKRD1Q15327 319 aa18.03■□□□□ 0.48
PTGFRN-201ENST00000393203 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
PTGFRN-201ENST00000393203 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
PTGFRN-201ENST00000393203 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
PTGFRN-201ENST00000393203 DCTN1Q14203 1278 aa18.02■□□□□ 0.47
PTGFRN-201ENST00000393203 CCDC158Q5M9N0 1113 aa18.02■□□□□ 0.47
PTGFRN-201ENST00000393203 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
PTGFRN-201ENST00000393203 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
PTGFRN-201ENST00000393203 TXLNAP40222 546 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 PIBF1Q8WXW3 757 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 TMPOP42166 694 aaKnown RBP18■□□□□ 0.47
PTGFRN-201ENST00000393203 HFM1A2PYH4 1435 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 CALRP27797 417 aaKnown RBP18■□□□□ 0.47
PTGFRN-201ENST00000393203 ESCO1Q5FWF5 840 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 DEF6Q9H4E7 631 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 SYNJ1O43426 1573 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 MAP3K11Q16584 847 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
PTGFRN-201ENST00000393203 JMYQ8N9B5 988 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
PTGFRN-201ENST00000393203 CCDC102AQ96A19 550 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 TANGO6Q9C0B7 1094 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 ZHX3Q9H4I2 956 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 ZNHIT6Q9NWK9 470 aaKnown RBP17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 CCDC181Q5TID7 509 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 CEP57L1Q8IYX8 460 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 TMX1Q9H3N1 280 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 KRT18P05783 430 aaKnown RBP17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 RARSP54136 660 aaKnown RBP17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 SSH1Q8WYL5 1049 aa17.99■□□□□ 0.47
PTGFRN-201ENST00000393203 CCDC69A6NI79 296 aa17.98■□□□□ 0.47
PTGFRN-201ENST00000393203 CCDC85AQ96PX6 553 aaPredicted RBP17.98■□□□□ 0.47
PTGFRN-201ENST00000393203 USP25Q9UHP3 1055 aa17.98■□□□□ 0.47
PTGFRN-201ENST00000393203 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
PTGFRN-201ENST00000393203 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
PTGFRN-201ENST00000393203 TRERF1Q96PN7 1200 aa17.97■□□□□ 0.47
PTGFRN-201ENST00000393203 NSD3Q9BZ95 1437 aa17.97■□□□□ 0.47
PTGFRN-201ENST00000393203 MCM10Q7L590 875 aa17.97■□□□□ 0.47
PTGFRN-201ENST00000393203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.97■□□□□ 0.476e-8■■■■■ 75.6
PTGFRN-201ENST00000393203 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
PTGFRN-201ENST00000393203 CCAR1Q8IX12 1150 aaKnown RBP17.97■□□□□ 0.47
PTGFRN-201ENST00000393203 CFAP100Q494V2 611 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms