RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 COL18A1P39060 1754 aa18.24■□□□□ 0.51
MRPL55-219ENST00000391867 ONECUT3O60422 494 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-219ENST00000391867 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
MRPL55-219ENST00000391867 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
MRPL55-219ENST00000391867 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
MRPL55-219ENST00000391867 FBLN1P23142 703 aa18.21■□□□□ 0.51
MRPL55-219ENST00000391867 COG3Q96JB2 828 aa18.21■□□□□ 0.51
MRPL55-219ENST00000391867 RGPD5Q99666 1765 aa18.21■□□□□ 0.51
MRPL55-219ENST00000391867 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
MRPL55-219ENST00000391867 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
MRPL55-219ENST00000391867 LTN1O94822 1766 aa18.19■□□□□ 0.5
MRPL55-219ENST00000391867 FYB1O15117 783 aa18.19■□□□□ 0.5
MRPL55-219ENST00000391867 FAM182BQ5T319 152 aa18.19■□□□□ 0.5
MRPL55-219ENST00000391867 TOM1L2Q6ZVM7 507 aa18.19■□□□□ 0.5
MRPL55-219ENST00000391867 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
MRPL55-219ENST00000391867 CRB1P82279 1406 aa18.18■□□□□ 0.5
MRPL55-219ENST00000391867 CSB-PGBD3P0DP91 1061 aa18.18■□□□□ 0.5
MRPL55-219ENST00000391867 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
MRPL55-219ENST00000391867 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
MRPL55-219ENST00000391867 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
MRPL55-219ENST00000391867 BARGINQ6ZT62 677 aa18.15■□□□□ 0.5
MRPL55-219ENST00000391867 MAP3K19Q56UN5 1328 aa18.14■□□□□ 0.49
MRPL55-219ENST00000391867 ABCC6O95255 1503 aa18.13■□□□□ 0.49
MRPL55-219ENST00000391867 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
MRPL55-219ENST00000391867 PANK3Q9H999 370 aa18.13■□□□□ 0.49
MRPL55-219ENST00000391867 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
MRPL55-219ENST00000391867 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-219ENST00000391867 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
MRPL55-219ENST00000391867 ERBB3P21860 1342 aa18.12■□□□□ 0.49
MRPL55-219ENST00000391867 AMPHP49418 695 aa18.11■□□□□ 0.49
MRPL55-219ENST00000391867 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
MRPL55-219ENST00000391867 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
MRPL55-219ENST00000391867 CGNL1Q0VF96 1302 aa18.1■□□□□ 0.49
MRPL55-219ENST00000391867 IP6K1Q92551 441 aa18.1■□□□□ 0.49
MRPL55-219ENST00000391867 CARD10Q9BWT7 1032 aa18.1■□□□□ 0.49
MRPL55-219ENST00000391867 HOXC9P31274 260 aa18.09■□□□□ 0.49
MRPL55-219ENST00000391867 BLMP54132 1417 aaPredicted RBP18.08■□□□□ 0.49
MRPL55-219ENST00000391867 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
MRPL55-219ENST00000391867 PDE3BQ13370 1112 aa18.08■□□□□ 0.48
MRPL55-219ENST00000391867 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.48
MRPL55-219ENST00000391867 LRRC37A3O60309 1634 aa18.08■□□□□ 0.48
MRPL55-219ENST00000391867 TNNT2P45379 298 aaPredicted RBP18.06■□□□□ 0.48
MRPL55-219ENST00000391867 DEFB132Q7Z7B7 95 aa18.06■□□□□ 0.48
MRPL55-219ENST00000391867 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
MRPL55-219ENST00000391867 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
MRPL55-219ENST00000391867 DDB1Q16531 1140 aa18.05■□□□□ 0.48
MRPL55-219ENST00000391867 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
MRPL55-219ENST00000391867 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
MRPL55-219ENST00000391867 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
MRPL55-219ENST00000391867 EP400Q96L91 3159 aa18.04■□□□□ 0.48
MRPL55-219ENST00000391867 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-219ENST00000391867 SF3B2Q13435 895 aaKnown RBP18.04■□□□□ 0.48
MRPL55-219ENST00000391867 CCDC125Q86Z20 511 aa18.04■□□□□ 0.48
MRPL55-219ENST00000391867 TRIM37O94972 964 aa18.03■□□□□ 0.48
MRPL55-219ENST00000391867 HSP90AB2PQ58FF8 381 aa18.03■□□□□ 0.48
MRPL55-219ENST00000391867 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.48
MRPL55-219ENST00000391867 FAM196AQ6ZSG2 479 aa18.02■□□□□ 0.48
MRPL55-219ENST00000391867 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.47
MRPL55-219ENST00000391867 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
MRPL55-219ENST00000391867 CDCA7Q9BWT1 371 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-219ENST00000391867 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
MRPL55-219ENST00000391867 FLT4P35916 1363 aa18.01■□□□□ 0.47
MRPL55-219ENST00000391867 IL2RBP14784 551 aa18■□□□□ 0.47
MRPL55-219ENST00000391867 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
MRPL55-219ENST00000391867 MARCH10Q8NA82 808 aaPredicted RBP18■□□□□ 0.47
MRPL55-219ENST00000391867 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
MRPL55-219ENST00000391867 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
MRPL55-219ENST00000391867 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
MRPL55-219ENST00000391867 EXOC5O00471 708 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 NBPF6Q5VWK0 638 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 NBPF4Q96M43 638 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 INSRP06213 1382 aa17.98■□□□□ 0.47
MRPL55-219ENST00000391867 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
MRPL55-219ENST00000391867 SMG6Q86US8 1419 aaKnown RBP17.98■□□□□ 0.47
MRPL55-219ENST00000391867 NSD2O96028 1365 aa17.97■□□□□ 0.47
MRPL55-219ENST00000391867 BAG6P46379 1132 aa17.97■□□□□ 0.47
MRPL55-219ENST00000391867 EN1Q05925 392 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-219ENST00000391867 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-219ENST00000391867 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
MRPL55-219ENST00000391867 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-219ENST00000391867 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
MRPL55-219ENST00000391867 MEGF6O75095 1541 aa17.95■□□□□ 0.46
MRPL55-219ENST00000391867 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
MRPL55-219ENST00000391867 APBA3O96018 575 aa17.94■□□□□ 0.46
MRPL55-219ENST00000391867 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
MRPL55-219ENST00000391867 PER1O15534 1290 aaPredicted RBP17.93■□□□□ 0.46
MRPL55-219ENST00000391867 EZH2Q15910 746 aaKnown RBP17.92■□□□□ 0.46
MRPL55-219ENST00000391867 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
MRPL55-219ENST00000391867 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
MRPL55-219ENST00000391867 ACSBG1Q96GR2 724 aa17.9■□□□□ 0.46
MRPL55-219ENST00000391867 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
MRPL55-219ENST00000391867 RAPGEF4Q8WZA2 1011 aa17.89■□□□□ 0.45
MRPL55-219ENST00000391867 EYA1Q99502 592 aa17.89■□□□□ 0.45
MRPL55-219ENST00000391867 KCNQ2O43526 872 aa17.88■□□□□ 0.45
MRPL55-219ENST00000391867 CAMKK2Q96RR4 588 aa17.88■□□□□ 0.45
MRPL55-219ENST00000391867 BCL9O00512 1426 aa17.88■□□□□ 0.45
MRPL55-219ENST00000391867 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms