RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZFP42Q96MM3 310 aa8.01□□□□□ -1.13
TRAV40-201ENST00000390467 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
TRAV40-201ENST00000390467 CCDC116Q8IYX3 515 aa8□□□□□ -1.13
TRAV40-201ENST00000390467 MTMR14Q8NCE2 650 aa8□□□□□ -1.13
TRAV40-201ENST00000390467 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
TRAV40-201ENST00000390467 KCTD15Q96SI1 283 aaPredicted RBP8□□□□□ -1.13
TRAV40-201ENST00000390467 MEIOBQ8N635 442 aa7.99□□□□□ -1.13
TRAV40-201ENST00000390467 INTS6LQ5JSJ4 861 aaKnown RBP7.98□□□□□ -1.13
TRAV40-201ENST00000390467 PPP1R26Q5T8A7 1209 aaPredicted RBP7.98□□□□□ -1.13
TRAV40-201ENST00000390467 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
TRAV40-201ENST00000390467 PNMA1Q8ND90 353 aa7.98□□□□□ -1.13
TRAV40-201ENST00000390467 SNRKQ9NRH2 765 aa7.98□□□□□ -1.13
TRAV40-201ENST00000390467 NFX1Q12986 1120 aaKnown RBP7.97□□□□□ -1.13
TRAV40-201ENST00000390467 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
TRAV40-201ENST00000390467 BANK1Q8NDB2 785 aa7.97□□□□□ -1.13
TRAV40-201ENST00000390467 SOBPA7XYQ1 873 aa7.96□□□□□ -1.14
TRAV40-201ENST00000390467 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
TRAV40-201ENST00000390467 CBLBQ13191 982 aa7.96□□□□□ -1.14
TRAV40-201ENST00000390467 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
TRAV40-201ENST00000390467 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
TRAV40-201ENST00000390467 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
TRAV40-201ENST00000390467 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.14
TRAV40-201ENST00000390467 SCARF1Q14162 830 aa7.95□□□□□ -1.14
TRAV40-201ENST00000390467 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
TRAV40-201ENST00000390467 SOCS7O14512 581 aa7.94□□□□□ -1.14
TRAV40-201ENST00000390467 RAB15P59190 212 aa7.94□□□□□ -1.14
TRAV40-201ENST00000390467 DZIP3Q86Y13 1208 aaKnown RBP7.94□□□□□ -1.14
TRAV40-201ENST00000390467 ESPNB1AK53 854 aa7.93□□□□□ -1.14
TRAV40-201ENST00000390467 TERTO14746 1132 aaKnown RBP7.93□□□□□ -1.14
TRAV40-201ENST00000390467 WFS1O76024 890 aa7.93□□□□□ -1.14
TRAV40-201ENST00000390467 NBPF20Q3BBV1 942 aa7.93□□□□□ -1.14
TRAV40-201ENST00000390467 TMPRSS4Q9NRS4 437 aa7.93□□□□□ -1.14
TRAV40-201ENST00000390467 BMP2P12643 396 aa7.92□□□□□ -1.14
TRAV40-201ENST00000390467 Q6ZVU0 165 aa7.92□□□□□ -1.14
TRAV40-201ENST00000390467 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
TRAV40-201ENST00000390467 NDUFB9Q9Y6M9 179 aa7.92□□□□□ -1.14
TRAV40-201ENST00000390467 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
TRAV40-201ENST00000390467 PCDHB9Q9Y5E1 797 aa7.91□□□□□ -1.14
TRAV40-201ENST00000390467 ERVH48-1M5A8F1 160 aa7.9□□□□□ -1.14
TRAV40-201ENST00000390467 VEGFBP49765 207 aa7.9□□□□□ -1.14
TRAV40-201ENST00000390467 DHX9Q08211 1270 aaKnown RBP7.9□□□□□ -1.14
TRAV40-201ENST00000390467 AGBL1Q96MI9 1066 aa7.9□□□□□ -1.14
TRAV40-201ENST00000390467 TBC1D2BQ9UPU7 963 aa7.9□□□□□ -1.14
TRAV40-201ENST00000390467 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
TRAV40-201ENST00000390467 LILRA1O75019 489 aa7.89□□□□□ -1.15
TRAV40-201ENST00000390467 UPP2O95045 317 aa7.89□□□□□ -1.15
TRAV40-201ENST00000390467 NR1H3Q13133 447 aa7.89□□□□□ -1.15
TRAV40-201ENST00000390467 TSEN34Q9BSV6 310 aaKnown RBP7.89□□□□□ -1.15
TRAV40-201ENST00000390467 NXF1Q9UBU9 619 aaKnown RBP7.89□□□□□ -1.15
TRAV40-201ENST00000390467 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
TRAV40-201ENST00000390467 GIGYF1O75420 1035 aaPredicted RBP7.88□□□□□ -1.15
TRAV40-201ENST00000390467 H3BM21 787 aa7.87□□□□□ -1.15
TRAV40-201ENST00000390467 MAN1A2O60476 641 aa7.87□□□□□ -1.15
TRAV40-201ENST00000390467 ADD1P35611 737 aaKnown RBP7.87□□□□□ -1.15
TRAV40-201ENST00000390467 RELBQ01201 579 aa7.87□□□□□ -1.15
TRAV40-201ENST00000390467 SPINT1O43278 529 aa7.86□□□□□ -1.15
TRAV40-201ENST00000390467 KDF1Q8NAX2 398 aaPredicted RBP7.86□□□□□ -1.15
TRAV40-201ENST00000390467 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
TRAV40-201ENST00000390467 ERBB4Q15303 1308 aa7.85□□□□□ -1.15
TRAV40-201ENST00000390467 APBB1O00213 710 aa7.85□□□□□ -1.15
TRAV40-201ENST00000390467 IRF5Q13568 498 aa7.85□□□□□ -1.15
TRAV40-201ENST00000390467 SEPT12Q8IYM1 358 aa7.85□□□□□ -1.15
TRAV40-201ENST00000390467 FIGNL2A6NMB9 653 aa7.84□□□□□ -1.15
TRAV40-201ENST00000390467 TTLL8A6PVC2 850 aa7.84□□□□□ -1.15
TRAV40-201ENST00000390467 ADH1AP07327 375 aa7.84□□□□□ -1.15
TRAV40-201ENST00000390467 CTSOP43234 321 aaPredicted RBP7.84□□□□□ -1.15
TRAV40-201ENST00000390467 MCM6Q14566 821 aa7.84□□□□□ -1.15
TRAV40-201ENST00000390467 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
TRAV40-201ENST00000390467 WIPF1O43516 503 aa7.83□□□□□ -1.16
TRAV40-201ENST00000390467 NPAS3Q8IXF0 933 aa7.83□□□□□ -1.16
TRAV40-201ENST00000390467 ZNF395Q9H8N7 513 aaPredicted RBP7.83□□□□□ -1.16
TRAV40-201ENST00000390467 SCTRP47872 440 aa7.82□□□□□ -1.16
TRAV40-201ENST00000390467 GDPD2Q9HCC8 539 aa7.82□□□□□ -1.16
TRAV40-201ENST00000390467 GMPRP36959 345 aa7.81□□□□□ -1.16
TRAV40-201ENST00000390467 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
TRAV40-201ENST00000390467 RNF217Q8TC41 542 aa7.81□□□□□ -1.16
TRAV40-201ENST00000390467 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
TRAV40-201ENST00000390467 PTGIRP43119 386 aa7.8□□□□□ -1.16
TRAV40-201ENST00000390467 ERVK-9P63128 1117 aa7.8□□□□□ -1.16
TRAV40-201ENST00000390467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.16
TRAV40-201ENST00000390467 POLMQ9NP87 494 aaPredicted RBP7.8□□□□□ -1.16
TRAV40-201ENST00000390467 PCDHB11Q9Y5F2 797 aa7.8□□□□□ -1.16
TRAV40-201ENST00000390467 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
TRAV40-201ENST00000390467 PTSQ03393 145 aa7.79□□□□□ -1.16
TRAV40-201ENST00000390467 IRF7Q92985 503 aa7.79□□□□□ -1.16
TRAV40-201ENST00000390467 ZNF330Q9Y3S2 320 aaPredicted RBP7.79□□□□□ -1.16
TRAV40-201ENST00000390467 VSIG8P0DPA2 414 aa7.78□□□□□ -1.16
TRAV40-201ENST00000390467 ABL2P42684 1182 aa7.78□□□□□ -1.16
TRAV40-201ENST00000390467 MCCD1P59942 119 aaPredicted RBP7.78□□□□□ -1.16
TRAV40-201ENST00000390467 VAC14Q08AM6 782 aa7.78□□□□□ -1.16
TRAV40-201ENST00000390467 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
TRAV40-201ENST00000390467 CEP126Q9P2H0 1117 aa7.78□□□□□ -1.16
TRAV40-201ENST00000390467 RNF20Q5VTR2 975 aa7.77□□□□□ -1.17
TRAV40-201ENST00000390467 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
TRAV40-201ENST00000390467 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
TRAV40-201ENST00000390467 ZNF592Q92610 1267 aa7.76□□□□□ -1.17
TRAV40-201ENST00000390467 CDCA7Q9BWT1 371 aaPredicted RBP7.76□□□□□ -1.17
TRAV40-201ENST00000390467 OSBPL3Q9H4L5 887 aa7.76□□□□□ -1.17
TRAV40-201ENST00000390467 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
TRAV40-201ENST00000390467 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms