RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
ALK-201ENST00000389048 ZFP91Q96JP5 570 aaPredicted RBP18.35■□□□□ 0.53
ALK-201ENST00000389048 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
ALK-201ENST00000389048 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
ALK-201ENST00000389048 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 GNAI2P04899 355 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 USP5P45974 858 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 SPATA32Q96LK8 384 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 RABEP1Q15276 862 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
ALK-201ENST00000389048 KIAA1328Q86T90 577 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 CCDC7Q96M83 1385 aa18.34■□□□□ 0.53
ALK-201ENST00000389048 K7ELQ4 463 aaPredicted RBP18.33■□□□□ 0.53
ALK-201ENST00000389048 CYB5RLQ6IPT4 315 aa18.33■□□□□ 0.53
ALK-201ENST00000389048 DHX8Q14562 1220 aaKnown RBP18.33■□□□□ 0.52
ALK-201ENST00000389048 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
ALK-201ENST00000389048 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.52
ALK-201ENST00000389048 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
ALK-201ENST00000389048 GOLGA6L10A0A0M3HER8 536 aa18.32■□□□□ 0.52
ALK-201ENST00000389048 SYCE3A1L190 88 aa18.32■□□□□ 0.52
ALK-201ENST00000389048 AACSQ86V21 672 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
ALK-201ENST00000389048 GBP2P32456 591 aaPredicted RBP18.31■□□□□ 0.52
ALK-201ENST00000389048 STIM1Q13586 685 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 NEBLO76041 1014 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 GNAI3P08754 354 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
ALK-201ENST00000389048 PDCP20941 246 aa18.3■□□□□ 0.52
ALK-201ENST00000389048 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
ALK-201ENST00000389048 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
ALK-201ENST00000389048 NUTM2BA6NNL0 878 aaPredicted RBP18.3■□□□□ 0.52
ALK-201ENST00000389048 NUTM2EB1AL46 878 aaPredicted RBP18.3■□□□□ 0.52
ALK-201ENST00000389048 NUTM1Q86Y26 1132 aa18.3■□□□□ 0.52
ALK-201ENST00000389048 NUTM2AQ8IVF1 878 aaPredicted RBP18.3■□□□□ 0.52
ALK-201ENST00000389048 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
ALK-201ENST00000389048 GOLGA6L7A0A1B0GV03 622 aa18.29■□□□□ 0.52
ALK-201ENST00000389048 HMGN5P82970 282 aaKnown RBP18.29■□□□□ 0.52
ALK-201ENST00000389048 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
ALK-201ENST00000389048 TRIM22Q8IYM9 498 aa18.29■□□□□ 0.52
ALK-201ENST00000389048 GOPCQ9HD26 462 aa18.29■□□□□ 0.52
ALK-201ENST00000389048 TNNT1P13805 278 aa18.29■□□□□ 0.52
ALK-201ENST00000389048 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
ALK-201ENST00000389048 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
ALK-201ENST00000389048 KRT85P78386 507 aa18.28■□□□□ 0.52
ALK-201ENST00000389048 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.52
ALK-201ENST00000389048 ERLIN1O75477 346 aa18.28■□□□□ 0.52
ALK-201ENST00000389048 EIF3JO75822 258 aaKnown RBP18.28■□□□□ 0.52
ALK-201ENST00000389048 EIF5P55010 431 aaKnown RBP18.28■□□□□ 0.52
ALK-201ENST00000389048 UPF3BQ9BZI7 483 aaKnown RBP18.28■□□□□ 0.52
ALK-201ENST00000389048 ZBTB9Q96C00 473 aa18.28■□□□□ 0.52
ALK-201ENST00000389048 DACH1Q9UI36 760 aa18.28■□□□□ 0.52
ALK-201ENST00000389048 HIP1O00291 1037 aa18.28■□□□□ 0.52
ALK-201ENST00000389048 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
ALK-201ENST00000389048 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
ALK-201ENST00000389048 ZNF76P36508 570 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 POLR3GO15318 223 aaPredicted RBP18.27■□□□□ 0.52
ALK-201ENST00000389048 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 KLHL10Q6JEL2 608 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 NUP62CLQ9H1M0 184 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 TDO2P48775 406 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 TTC16Q8NEE8 873 aa18.27■□□□□ 0.52
ALK-201ENST00000389048 GUCY1B3Q02153 619 aa18.27■□□□□ 0.51
ALK-201ENST00000389048 SRRTQ9BXP5 876 aaKnown RBP18.27■□□□□ 0.51
ALK-201ENST00000389048 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
ALK-201ENST00000389048 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
ALK-201ENST00000389048 CFAP100Q494V2 611 aa18.26■□□□□ 0.51
ALK-201ENST00000389048 JMYQ8N9B5 988 aa18.26■□□□□ 0.51
ALK-201ENST00000389048 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
ALK-201ENST00000389048 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
ALK-201ENST00000389048 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
ALK-201ENST00000389048 SMARCA5O60264 1052 aaPredicted RBP18.26■□□□□ 0.51
ALK-201ENST00000389048 CABP4P57796 275 aa18.26■□□□□ 0.51
ALK-201ENST00000389048 CEP57L1Q8IYX8 460 aa18.26■□□□□ 0.51
ALK-201ENST00000389048 CBFA2T2O43439 604 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 PPM1FP49593 454 aaPredicted RBP18.25■□□□□ 0.51
ALK-201ENST00000389048 SULT6B1Q6IMI4 303 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 GPATCH11Q8N954 259 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 DYDC1Q8WWB3 177 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 WASHC2AQ641Q2 1341 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 PDCL2Q8N4E4 241 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 MAP2K1Q02750 393 aaPredicted RBP18.25■□□□□ 0.51
ALK-201ENST00000389048 TRMT1LQ7Z2T5 733 aaKnown RBP18.25■□□□□ 0.51
ALK-201ENST00000389048 PSMD1Q99460 953 aa18.25■□□□□ 0.51
ALK-201ENST00000389048 MCM2P49736 904 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 UBE4AQ14139 1066 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 GNL3LQ9NVN8 582 aaKnown RBP18.24■□□□□ 0.51
ALK-201ENST00000389048 RAI14Q9P0K7 980 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 GCC1Q96CN9 775 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 EZRP15311 586 aaKnown RBP18.24■□□□□ 0.51
ALK-201ENST00000389048 SERPINA10Q9UK55 444 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
ALK-201ENST00000389048 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms