RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 WDR78Q5VTH9 848 aa17.75■□□□□ 0.43
LRRK1-201ENST00000388948 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
LRRK1-201ENST00000388948 ZNF76P36508 570 aa17.74■□□□□ 0.43
LRRK1-201ENST00000388948 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
LRRK1-201ENST00000388948 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
LRRK1-201ENST00000388948 CD109Q6YHK3 1445 aa17.74■□□□□ 0.43
LRRK1-201ENST00000388948 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LRRK1-201ENST00000388948 HFM1A2PYH4 1435 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 CEBPAP49715 358 aaPredicted RBP17.73■□□□□ 0.43
LRRK1-201ENST00000388948 CCDC173Q0VFZ6 552 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 PDILTQ8N807 584 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 RPGRQ92834 1020 aaKnown RBP17.73■□□□□ 0.43
LRRK1-201ENST00000388948 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
LRRK1-201ENST00000388948 CFTRP13569 1480 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 MATR3P43243 847 aaKnown RBP eCLIP17.73■□□□□ 0.43
LRRK1-201ENST00000388948 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
LRRK1-201ENST00000388948 KIF21BO75037 1637 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 UBAP1LF5GYI3 381 aa17.73■□□□□ 0.43
LRRK1-201ENST00000388948 NAT10Q9H0A0 1025 aaKnown RBP17.73■□□□□ 0.43
LRRK1-201ENST00000388948 NUCB2P80303 420 aa17.72■□□□□ 0.43
LRRK1-201ENST00000388948 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
LRRK1-201ENST00000388948 EXOC5O00471 708 aa17.72■□□□□ 0.43
LRRK1-201ENST00000388948 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
LRRK1-201ENST00000388948 NOB1Q9ULX3 412 aaKnown RBP17.71■□□□□ 0.43
LRRK1-201ENST00000388948 USP5P45974 858 aa17.71■□□□□ 0.43
LRRK1-201ENST00000388948 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
LRRK1-201ENST00000388948 WAPLQ7Z5K2 1190 aa17.71■□□□□ 0.43
LRRK1-201ENST00000388948 C22orf23Q9BZE7 217 aa17.71■□□□□ 0.43
LRRK1-201ENST00000388948 IDH1O75874 414 aaKnown RBP17.71■□□□□ 0.42
LRRK1-201ENST00000388948 CAVIN4Q5BKX8 364 aa17.7■□□□□ 0.42
LRRK1-201ENST00000388948 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
LRRK1-201ENST00000388948 EPRSP07814 1512 aaKnown RBP17.7■□□□□ 0.42
LRRK1-201ENST00000388948 MAP4K4O95819 1239 aaPredicted RBP17.7■□□□□ 0.42
LRRK1-201ENST00000388948 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
LRRK1-201ENST00000388948 AACSQ86V21 672 aa17.7■□□□□ 0.42
LRRK1-201ENST00000388948 AK7Q96M32 723 aa17.7■□□□□ 0.42
LRRK1-201ENST00000388948 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
LRRK1-201ENST00000388948 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
LRRK1-201ENST00000388948 AAMPQ13685 434 aa17.69■□□□□ 0.42
LRRK1-201ENST00000388948 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
LRRK1-201ENST00000388948 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
LRRK1-201ENST00000388948 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
LRRK1-201ENST00000388948 CEBPZQ03701 1054 aaKnown RBP17.68■□□□□ 0.42
LRRK1-201ENST00000388948 RUFY1Q96T51 708 aa17.68■□□□□ 0.42
LRRK1-201ENST00000388948 TTLL5Q6EMB2 1281 aa17.68■□□□□ 0.42
LRRK1-201ENST00000388948 TMEM87AQ8NBN3 555 aa17.68■□□□□ 0.42
LRRK1-201ENST00000388948 TOM1O60784 492 aa17.67■□□□□ 0.42
LRRK1-201ENST00000388948 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
LRRK1-201ENST00000388948 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
LRRK1-201ENST00000388948 SSBP05455 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
LRRK1-201ENST00000388948 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
LRRK1-201ENST00000388948 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
LRRK1-201ENST00000388948 STK3Q13188 491 aa17.67■□□□□ 0.42
LRRK1-201ENST00000388948 SCLT1Q96NL6 688 aa17.67■□□□□ 0.42
LRRK1-201ENST00000388948 LRPPRCP42704 1394 aaKnown RBP17.67■□□□□ 0.42
LRRK1-201ENST00000388948 PDCP20941 246 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 NEK4P51957 841 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 CHMP5Q9NZZ3 219 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 STK38Q15208 465 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 PHF8Q9UPP1 1060 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 ZNF287Q9HBT7 754 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 HECW1Q76N89 1606 aa17.66■□□□□ 0.42
LRRK1-201ENST00000388948 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
LRRK1-201ENST00000388948 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
LRRK1-201ENST00000388948 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
LRRK1-201ENST00000388948 GRM1Q13255 1194 aa17.65■□□□□ 0.42
LRRK1-201ENST00000388948 FILIP1LQ4L180 1135 aa17.65■□□□□ 0.42
LRRK1-201ENST00000388948 ZNF396Q96N95 335 aaPredicted RBP17.65■□□□□ 0.42
LRRK1-201ENST00000388948 C6orf229H3BNL8 230 aa17.64■□□□□ 0.42
LRRK1-201ENST00000388948 CAGE1Q8TC20 777 aa17.64■□□□□ 0.41
LRRK1-201ENST00000388948 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
LRRK1-201ENST00000388948 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.41
LRRK1-201ENST00000388948 BRD4O60885 1362 aaPredicted RBP17.64■□□□□ 0.41
LRRK1-201ENST00000388948 IFIT1P09914 478 aaKnown RBP17.64■□□□□ 0.41
LRRK1-201ENST00000388948 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
LRRK1-201ENST00000388948 CDR1P51861 262 aa17.63■□□□□ 0.41
LRRK1-201ENST00000388948 JMYQ8N9B5 988 aa17.63■□□□□ 0.41
LRRK1-201ENST00000388948 MKNK2Q9HBH9 465 aa17.63■□□□□ 0.41
LRRK1-201ENST00000388948 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
LRRK1-201ENST00000388948 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
LRRK1-201ENST00000388948 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
LRRK1-201ENST00000388948 TANGO6Q9C0B7 1094 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 RFC4P35249 363 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 SETQ01105 290 aaPredicted RBP17.62■□□□□ 0.41
LRRK1-201ENST00000388948 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
LRRK1-201ENST00000388948 NOL7Q9UMY1 257 aaKnown RBP17.62■□□□□ 0.41
LRRK1-201ENST00000388948 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 STIM1Q13586 685 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 CTNNA3Q9UI47 895 aa17.62■□□□□ 0.41
LRRK1-201ENST00000388948 TRIM21P19474 475 aaKnown RBP17.61■□□□□ 0.41
LRRK1-201ENST00000388948 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
LRRK1-201ENST00000388948 TNIP1Q15025 636 aa17.61■□□□□ 0.41
LRRK1-201ENST00000388948 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
LRRK1-201ENST00000388948 IFT57Q9NWB7 429 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1184.8 ms