RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 DDB1Q16531 1140 aa37.51■■■■□ 3.6
NPHP3-202ENST00000383282 OVOS2A0A0G2JMS6 1433 aa37.5■■■■□ 3.59
NPHP3-202ENST00000383282 OVOS2A0A0J9YW53 1432 aa37.5■■■■□ 3.59
NPHP3-202ENST00000383282 OVOS2Q6IE36 1432 aa37.5■■■■□ 3.59
NPHP3-202ENST00000383282 CSB-PGBD3P0DP91 1061 aa37.49■■■■□ 3.59
NPHP3-202ENST00000383282 COL18A1P39060 1754 aa37.48■■■■□ 3.59
NPHP3-202ENST00000383282 CDCA7Q9BWT1 371 aaPredicted RBP37.48■■■■□ 3.59
NPHP3-202ENST00000383282 NBPF14Q5TI25 921 aa37.47■■■■□ 3.59
NPHP3-202ENST00000383282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.44■■■■□ 3.58
NPHP3-202ENST00000383282 TMC1Q8TDI8 760 aa37.44■■■■□ 3.58
NPHP3-202ENST00000383282 HDGFL2Q7Z4V5 671 aaPredicted RBP37.42■■■■□ 3.58
NPHP3-202ENST00000383282 CARD10Q9BWT7 1032 aa37.42■■■■□ 3.58
NPHP3-202ENST00000383282 LRRC37A3O60309 1634 aa37.42■■■■□ 3.58
NPHP3-202ENST00000383282 NFAT5O94916 1531 aa37.41■■■■□ 3.58
NPHP3-202ENST00000383282 RREB1Q92766 1687 aa37.41■■■■□ 3.58
NPHP3-202ENST00000383282 MON2Q7Z3U7 1717 aa37.39■■■■□ 3.58
NPHP3-202ENST00000383282 USP31Q70CQ4 1352 aa37.39■■■■□ 3.58
NPHP3-202ENST00000383282 ABCC6O95255 1503 aa37.37■■■■□ 3.57
NPHP3-202ENST00000383282 PEAK1Q9H792 1746 aa37.36■■■■□ 3.57
NPHP3-202ENST00000383282 CCDC7Q96M83 1385 aa37.35■■■■□ 3.57
NPHP3-202ENST00000383282 NME9Q86XW9 330 aa37.35■■■■□ 3.57
NPHP3-202ENST00000383282 NUP188Q5SRE5 1749 aa37.35■■■■□ 3.57
NPHP3-202ENST00000383282 CD163L1Q9NR16 1453 aa37.34■■■■□ 3.57
NPHP3-202ENST00000383282 SLC12A5Q9H2X9 1139 aa37.34■■■■□ 3.57
NPHP3-202ENST00000383282 TERF2IPQ9NYB0 399 aa37.34■■■■□ 3.57
NPHP3-202ENST00000383282 PUS7Q96PZ0 661 aaKnown RBP37.33■■■■□ 3.57
NPHP3-202ENST00000383282 BCL11BQ9C0K0 894 aaPredicted RBP37.33■■■■□ 3.57
NPHP3-202ENST00000383282 WNK3Q9BYP7 1800 aa37.32■■■■□ 3.56
NPHP3-202ENST00000383282 EXOC5O00471 708 aa37.32■■■■□ 3.56
NPHP3-202ENST00000383282 PLSCR1O15162 318 aa37.32■■■■□ 3.56
NPHP3-202ENST00000383282 MARCH10Q8NA82 808 aaPredicted RBP37.32■■■■□ 3.56
NPHP3-202ENST00000383282 EDC4Q6P2E9 1401 aaKnown RBP37.31■■■■□ 3.56
NPHP3-202ENST00000383282 RGPD5Q99666 1765 aa37.3■■■■□ 3.56
NPHP3-202ENST00000383282 BCL9O00512 1426 aa37.29■■■■□ 3.56
NPHP3-202ENST00000383282 USP54Q70EL1 1684 aa37.27■■■■□ 3.56
NPHP3-202ENST00000383282 A0A1W2PP64 1363 aa37.26■■■■□ 3.55
NPHP3-202ENST00000383282 SLC24A1O60721 1099 aa37.25■■■■□ 3.55
NPHP3-202ENST00000383282 ERBB3P21860 1342 aa37.25■■■■□ 3.55
NPHP3-202ENST00000383282 NLRP2Q9NX02 1062 aa37.24■■■■□ 3.55
NPHP3-202ENST00000383282 SBF2Q86WG5 1849 aa37.24■■■■□ 3.55
NPHP3-202ENST00000383282 RGPD3A6NKT7 1758 aaPredicted RBP37.23■■■■□ 3.55
NPHP3-202ENST00000383282 RGPD4Q7Z3J3 1758 aa37.23■■■■□ 3.55
NPHP3-202ENST00000383282 NINLQ9Y2I6 1382 aa37.22■■■■□ 3.55
NPHP3-202ENST00000383282 TNS2Q63HR2 1409 aa37.21■■■■□ 3.55
NPHP3-202ENST00000383282 ST20-MTHFSA0A0A6YYL1 179 aa37.21■■■■□ 3.55
NPHP3-202ENST00000383282 PTF1AQ7RTS3 328 aa37.2■■■■□ 3.55
NPHP3-202ENST00000383282 TESK2Q96S53 571 aa37.19■■■■□ 3.54
NPHP3-202ENST00000383282 ANKRD24Q8TF21 1146 aa37.18■■■■□ 3.54
NPHP3-202ENST00000383282 SPON1Q9HCB6 807 aa37.18■■■■□ 3.54
NPHP3-202ENST00000383282 TRIM26Q12899 539 aaPredicted RBP37.17■■■■□ 3.54
NPHP3-202ENST00000383282 IL2RBP14784 551 aa37.16■■■■□ 3.54
NPHP3-202ENST00000383282 LTN1O94822 1766 aa37.14■■■■□ 3.54
NPHP3-202ENST00000383282 PPP1R1BQ9UD71 204 aaPredicted RBP37.14■■■■□ 3.54
NPHP3-202ENST00000383282 KCNQ2O43526 872 aa37.13■■■■□ 3.53
NPHP3-202ENST00000383282 ANO8Q9HCE9 1232 aaPredicted RBP37.12■■■■□ 3.53
NPHP3-202ENST00000383282 PROM2Q8N271 834 aa37.1■■■■□ 3.53
NPHP3-202ENST00000383282 COG3Q96JB2 828 aa37.1■■■■□ 3.53
NPHP3-202ENST00000383282 TXNRD1Q16881 649 aa37.09■■■■□ 3.53
NPHP3-202ENST00000383282 IP6K1Q92551 441 aa37.09■■■■□ 3.53
NPHP3-202ENST00000383282 ACSBG1Q96GR2 724 aa37.05■■■■□ 3.52
NPHP3-202ENST00000383282 STK32BQ9NY57 414 aa37.05■■■■□ 3.52
NPHP3-202ENST00000383282 TMF1P82094 1093 aa37.04■■■■□ 3.52
NPHP3-202ENST00000383282 ANKRD36BQ8N2N9 1353 aa37.03■■■■□ 3.52
NPHP3-202ENST00000383282 LTV1Q96GA3 475 aaPredicted RBP37.02■■■■□ 3.52
NPHP3-202ENST00000383282 USP47Q96K76 1375 aa37■■■■□ 3.51
NPHP3-202ENST00000383282 NHSQ6T4R5 1651 aa36.99■■■■□ 3.51
NPHP3-202ENST00000383282 AMPHP49418 695 aa36.99■■■■□ 3.51
NPHP3-202ENST00000383282 MAP3K19Q56UN5 1328 aa36.98■■■■□ 3.51
NPHP3-202ENST00000383282 SLC15A2Q16348 729 aa36.97■■■■□ 3.51
NPHP3-202ENST00000383282 HOXC9P31274 260 aa36.96■■■■□ 3.51
NPHP3-202ENST00000383282 FAM208AQ9UK61 1670 aaKnown RBP36.94■■■■□ 3.5
NPHP3-202ENST00000383282 CDCA8Q53HL2 280 aa36.94■■■■□ 3.5
NPHP3-202ENST00000383282 CASZ1Q86V15 1759 aa36.94■■■■□ 3.5
NPHP3-202ENST00000383282 DCAF8L1A6NGE4 600 aa36.93■■■■□ 3.5
NPHP3-202ENST00000383282 ZBTB7AO95365 584 aa36.92■■■■□ 3.5
NPHP3-202ENST00000383282 DDX54Q8TDD1 881 aaKnown RBP36.92■■■■□ 3.5
NPHP3-202ENST00000383282 PDGFDQ9GZP0 370 aaPredicted RBP36.92■■■■□ 3.5
NPHP3-202ENST00000383282 FBLN1P23142 703 aa36.9■■■■□ 3.5
NPHP3-202ENST00000383282 RTL1A6NKG5 1358 aa36.89■■■■□ 3.5
NPHP3-202ENST00000383282 GGNBP2Q9H3C7 697 aa36.88■■■■□ 3.49
NPHP3-202ENST00000383282 FYB1O15117 783 aa36.87■■■■□ 3.49
NPHP3-202ENST00000383282 ATF5Q9Y2D1 282 aaPredicted RBP36.86■■■■□ 3.49
NPHP3-202ENST00000383282 RRS1Q15050 365 aaKnown RBP36.85■■■■□ 3.49
NPHP3-202ENST00000383282 BTAF1O14981 1849 aa36.82■■■■□ 3.49
NPHP3-202ENST00000383282 MTFR1LQ9H019 292 aa36.82■■■■□ 3.48
NPHP3-202ENST00000383282 PTGER2P43116 358 aa36.81■■■■□ 3.48
NPHP3-202ENST00000383282 ZCRB1Q8TBF4 217 aaKnown RBP36.81■■■■□ 3.48
NPHP3-202ENST00000383282 TIMELESSQ9UNS1 1208 aa36.81■■■■□ 3.48
NPHP3-202ENST00000383282 SMG6Q86US8 1419 aaKnown RBP36.81■■■■□ 3.48
NPHP3-202ENST00000383282 KAT6BQ8WYB5 2073 aa36.81■■■■□ 3.48
NPHP3-202ENST00000383282 SYTL4Q96C24 671 aaPredicted RBP36.79■■■■□ 3.48
NPHP3-202ENST00000383282 YY1P25490 414 aa36.78■■■■□ 3.48
NPHP3-202ENST00000383282 SLC27A3Q5K4L6 730 aa36.77■■■■□ 3.48
NPHP3-202ENST00000383282 NBPF6Q5VWK0 638 aa36.76■■■■□ 3.48
NPHP3-202ENST00000383282 NBPF4Q96M43 638 aa36.76■■■■□ 3.48
NPHP3-202ENST00000383282 LRRC4BQ9NT99 713 aa36.76■■■■□ 3.48
NPHP3-202ENST00000383282 PAPPAQ13219 1627 aa36.76■■■■□ 3.48
NPHP3-202ENST00000383282 MEGF6O75095 1541 aa36.75■■■■□ 3.47
NPHP3-202ENST00000383282 PRIM1P49642 420 aaKnown RBP36.74■■■■□ 3.47
NPHP3-202ENST00000383282 RAPGEF4Q8WZA2 1011 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms