RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 TIMP2P16035 220 aa6.15□□□□□ -1.42
SMC6-202ENST00000381272 SENP2Q9HC62 589 aa6.15□□□□□ -1.42
SMC6-202ENST00000381272 NDUFB9Q9Y6M9 179 aa6.15□□□□□ -1.42
SMC6-202ENST00000381272 ZBBXA8MT70 800 aa6.15□□□□□ -1.43
SMC6-202ENST00000381272 ZIC2O95409 532 aaPredicted RBP6.15□□□□□ -1.43
SMC6-202ENST00000381272 KCTD15Q96SI1 283 aaPredicted RBP6.15□□□□□ -1.43
SMC6-202ENST00000381272 BMP1P13497 986 aa6.14□□□□□ -1.43
SMC6-202ENST00000381272 NBPF20Q3BBV1 942 aa6.14□□□□□ -1.43
SMC6-202ENST00000381272 DZIP3Q86Y13 1208 aaKnown RBP6.14□□□□□ -1.43
SMC6-202ENST00000381272 CCDC116Q8IYX3 515 aa6.14□□□□□ -1.43
SMC6-202ENST00000381272 ITPKCQ96DU7 683 aa6.14□□□□□ -1.43
SMC6-202ENST00000381272 PRM3Q9NNZ6 103 aa6.14□□□□□ -1.43
SMC6-202ENST00000381272 EMILIN1Q9Y6C2 1016 aa6.14□□□□□ -1.43
SMC6-202ENST00000381272 KIFC2Q96AC6 838 aa6.13□□□□□ -1.43
SMC6-202ENST00000381272 TRIM47Q96LD4 638 aa6.13□□□□□ -1.43
SMC6-202ENST00000381272 DCAF1Q9Y4B6 1507 aa6.13□□□□□ -1.43
SMC6-202ENST00000381272 TRIM46Q7Z4K8 759 aa6.13□□□□□ -1.43
SMC6-202ENST00000381272 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
SMC6-202ENST00000381272 FBXO45P0C2W1 286 aa6.12□□□□□ -1.43
SMC6-202ENST00000381272 DHX9Q08211 1270 aaKnown RBP6.12□□□□□ -1.43
SMC6-202ENST00000381272 SCARF1Q14162 830 aa6.11□□□□□ -1.43
SMC6-202ENST00000381272 PPP1R26Q5T8A7 1209 aaPredicted RBP6.11□□□□□ -1.43
SMC6-202ENST00000381272 MRPL14Q6P1L8 145 aaKnown RBP6.11□□□□□ -1.43
SMC6-202ENST00000381272 PGPEP1Q9NXJ5 209 aa6.11□□□□□ -1.43
SMC6-202ENST00000381272 NR1H3Q13133 447 aa6.11□□□□□ -1.43
SMC6-202ENST00000381272 INTS6LQ5JSJ4 861 aaKnown RBP6.11□□□□□ -1.43
SMC6-202ENST00000381272 ZNF592Q92610 1267 aa6.11□□□□□ -1.43
SMC6-202ENST00000381272 ZNF330Q9Y3S2 320 aaPredicted RBP6.11□□□□□ -1.43
SMC6-202ENST00000381272 PCDHB9Q9Y5E1 797 aa6.11□□□□□ -1.43
SMC6-202ENST00000381272 GPR37L1O60883 481 aa6.1□□□□□ -1.43
SMC6-202ENST00000381272 UPP2O95045 317 aa6.1□□□□□ -1.43
SMC6-202ENST00000381272 SNRPBP14678 240 aaKnown RBP6.1□□□□□ -1.43
SMC6-202ENST00000381272 ZNF775Q96BV0 537 aaPredicted RBP6.1□□□□□ -1.43
SMC6-202ENST00000381272 ZFP42Q96MM3 310 aa6.1□□□□□ -1.43
SMC6-202ENST00000381272 TBC1D2BQ9UPU7 963 aa6.1□□□□□ -1.43
SMC6-202ENST00000381272 MCCD1P59942 119 aaPredicted RBP6.09□□□□□ -1.43
SMC6-202ENST00000381272 TMEM132AQ24JP5 1023 aa6.09□□□□□ -1.43
SMC6-202ENST00000381272 MEIOBQ8N635 442 aa6.09□□□□□ -1.43
SMC6-202ENST00000381272 ESPNB1AK53 854 aa6.09□□□□□ -1.44
SMC6-202ENST00000381272 RAB15P59190 212 aa6.09□□□□□ -1.44
SMC6-202ENST00000381272 SEPT12Q8IYM1 358 aa6.09□□□□□ -1.44
SMC6-202ENST00000381272 PURBQ96QR8 312 aaKnown RBP6.09□□□□□ -1.44
SMC6-202ENST00000381272 MCM6Q14566 821 aa6.08□□□□□ -1.44
SMC6-202ENST00000381272 TRIM52Q96A61 297 aa6.08□□□□□ -1.44
SMC6-202ENST00000381272 TSEN34Q9BSV6 310 aaKnown RBP6.08□□□□□ -1.44
SMC6-202ENST00000381272 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
SMC6-202ENST00000381272 ERVH48-1M5A8F1 160 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 GIGYF1O75420 1035 aaPredicted RBP6.06□□□□□ -1.44
SMC6-202ENST00000381272 BMP2P12643 396 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 C6orf118Q5T5N4 469 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 Q6ZVU0 165 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 CCDC125Q86Z20 511 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 GDPD2Q9HCC8 539 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 CBLBQ13191 982 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 RNF20Q5VTR2 975 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 TMPRSS4Q9NRS4 437 aa6.06□□□□□ -1.44
SMC6-202ENST00000381272 ABL2P42684 1182 aa6.05□□□□□ -1.44
SMC6-202ENST00000381272 ZNF784Q8NCA9 323 aaPredicted RBP6.05□□□□□ -1.44
SMC6-202ENST00000381272 EIF4G2P78344 907 aaKnown RBP eCLIP6.04□□□□□ -1.441e-6■■■■■ 29.4
SMC6-202ENST00000381272 FLIIQ13045 1269 aa6.04□□□□□ -1.44
SMC6-202ENST00000381272 IRF5Q13568 498 aa6.04□□□□□ -1.44
SMC6-202ENST00000381272 WASHC4Q2M389 1173 aa6.04□□□□□ -1.44
SMC6-202ENST00000381272 SCRIBQ14160 1630 aa6.03□□□□□ -1.44
SMC6-202ENST00000381272 MAN1A2O60476 641 aa6.03□□□□□ -1.44
SMC6-202ENST00000381272 LILRA1O75019 489 aa6.03□□□□□ -1.44
SMC6-202ENST00000381272 LOC105371045A0A1W2PR82 267 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 RELBQ01201 579 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 CYLDQ9NQC7 956 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 CEP126Q9P2H0 1117 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 SOS2Q07890 1332 aaPredicted RBP6.02□□□□□ -1.45
SMC6-202ENST00000381272 SPINT1O43278 529 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 RAD21O60216 631 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 ADH1AP07327 375 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 VAC14Q08AM6 782 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 TREML4Q6UXN2 200 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 AGBL1Q96MI9 1066 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 NXF1Q9UBU9 619 aaKnown RBP6.02□□□□□ -1.45
SMC6-202ENST00000381272 COG6Q9Y2V7 657 aa6.02□□□□□ -1.45
SMC6-202ENST00000381272 TTLL8A6PVC2 850 aa6.01□□□□□ -1.45
SMC6-202ENST00000381272 TERTO14746 1132 aaKnown RBP6.01□□□□□ -1.45
SMC6-202ENST00000381272 ADD1P35611 737 aaKnown RBP6.01□□□□□ -1.45
SMC6-202ENST00000381272 WWC1Q8IX03 1113 aa6.01□□□□□ -1.45
SMC6-202ENST00000381272 PCGF6Q9BYE7 350 aa6.01□□□□□ -1.45
SMC6-202ENST00000381272 SOBPA7XYQ1 873 aa6□□□□□ -1.45
SMC6-202ENST00000381272 WFS1O76024 890 aa6□□□□□ -1.45
SMC6-202ENST00000381272 UBTFP17480 764 aaKnown RBP6□□□□□ -1.45
SMC6-202ENST00000381272 ESF1Q9H501 851 aaKnown RBP6□□□□□ -1.45
SMC6-202ENST00000381272 PCDHB11Q9Y5F2 797 aa6□□□□□ -1.45
SMC6-202ENST00000381272 ABCC9O60706 1549 aa6□□□□□ -1.45
SMC6-202ENST00000381272 PTGIRP43119 386 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 ERVK-9P63128 1117 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 NFX1Q12986 1120 aaKnown RBP5.99□□□□□ -1.45
SMC6-202ENST00000381272 CC2D2BQ6DHV5 1058 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 NPAS3Q8IXF0 933 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 ZNF395Q9H8N7 513 aaPredicted RBP5.99□□□□□ -1.45
SMC6-202ENST00000381272 DNMT3LQ9UJW3 386 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 SOX11P35716 441 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.99□□□□□ -1.45
SMC6-202ENST00000381272 SLFNL1Q499Z3 407 aa5.99□□□□□ -1.45
SMC6-202ENST00000381272 SLC16A10Q8TF71 515 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms