RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 SMC4Q9NTJ3 1288 aa22.09■■□□□ 1.13
PDX1-201ENST00000381033 PCDHB15Q9Y5E8 787 aa22.08■■□□□ 1.13
PDX1-201ENST00000381033 RGPD8O14715 1765 aaPredicted RBP22.08■■□□□ 1.12
PDX1-201ENST00000381033 AATKQ6ZMQ8 1374 aa22.08■■□□□ 1.12
PDX1-201ENST00000381033 DCTN1Q14203 1278 aa22.07■■□□□ 1.12
PDX1-201ENST00000381033 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
PDX1-201ENST00000381033 USP6P35125 1406 aa22.07■■□□□ 1.12
PDX1-201ENST00000381033 MS4A1P11836 297 aa22.06■■□□□ 1.12
PDX1-201ENST00000381033 NFE2L2Q16236 605 aa22.06■■□□□ 1.12
PDX1-201ENST00000381033 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
PDX1-201ENST00000381033 CDK12Q9NYV4 1490 aaPredicted RBP22.06■■□□□ 1.12
PDX1-201ENST00000381033 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
PDX1-201ENST00000381033 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
PDX1-201ENST00000381033 NUTM2GQ5VZR2 741 aa22.05■■□□□ 1.12
PDX1-201ENST00000381033 NEFMP07197 916 aa22.04■■□□□ 1.12
PDX1-201ENST00000381033 NGDNQ8NEJ9 315 aaKnown RBP22.04■■□□□ 1.12
PDX1-201ENST00000381033 TRIM27P14373 513 aa22.04■■□□□ 1.12
PDX1-201ENST00000381033 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
PDX1-201ENST00000381033 TOPAZ1Q8N9V7 1692 aa22.03■■□□□ 1.12
PDX1-201ENST00000381033 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
PDX1-201ENST00000381033 NOB1Q9ULX3 412 aaKnown RBP22.03■■□□□ 1.12
PDX1-201ENST00000381033 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
PDX1-201ENST00000381033 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
PDX1-201ENST00000381033 A0A0U1RQG5 324 aaPredicted RBP22.02■■□□□ 1.12
PDX1-201ENST00000381033 ZKSCAN2Q63HK3 967 aa22.02■■□□□ 1.12
PDX1-201ENST00000381033 NRKQ7Z2Y5 1582 aa22.02■■□□□ 1.11
PDX1-201ENST00000381033 IL16Q14005 1332 aa22.02■■□□□ 1.11
PDX1-201ENST00000381033 OVOS2A0A0J9YW53 1432 aa22.01■■□□□ 1.11
PDX1-201ENST00000381033 OVOS2Q6IE36 1432 aa22.01■■□□□ 1.11
PDX1-201ENST00000381033 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
PDX1-201ENST00000381033 FTSJ3Q8IY81 847 aaKnown RBP22■■□□□ 1.11
PDX1-201ENST00000381033 DZIP1LQ8IYY4 767 aaKnown RBP22■■□□□ 1.11
PDX1-201ENST00000381033 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
PDX1-201ENST00000381033 PTCH1Q13635 1447 aa21.99■■□□□ 1.11
PDX1-201ENST00000381033 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
PDX1-201ENST00000381033 MVPQ14764 893 aaKnown RBP21.99■■□□□ 1.11
PDX1-201ENST00000381033 IPO9Q96P70 1041 aaKnown RBP21.99■■□□□ 1.11
PDX1-201ENST00000381033 SSH2Q76I76 1423 aa21.98■■□□□ 1.11
PDX1-201ENST00000381033 ZMYND15Q9H091 742 aa21.98■■□□□ 1.11
PDX1-201ENST00000381033 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
PDX1-201ENST00000381033 PEAK1Q9H792 1746 aa21.97■■□□□ 1.11
PDX1-201ENST00000381033 DLG5Q8TDM6 1919 aa21.97■■□□□ 1.11
PDX1-201ENST00000381033 MAP3K19Q56UN5 1328 aa21.97■■□□□ 1.11
PDX1-201ENST00000381033 C8orf34Q49A92 452 aa21.97■■□□□ 1.11
PDX1-201ENST00000381033 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
PDX1-201ENST00000381033 ATF7IPQ6VMQ6 1270 aa21.96■■□□□ 1.11
PDX1-201ENST00000381033 CT47B1P0C2W7 299 aaPredicted RBP21.96■■□□□ 1.11
PDX1-201ENST00000381033 AAMPQ13685 434 aa21.96■■□□□ 1.11
PDX1-201ENST00000381033 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
PDX1-201ENST00000381033 TMEM57Q8N5G2 664 aa21.95■■□□□ 1.1
PDX1-201ENST00000381033 VAMP4O75379 141 aa21.94■■□□□ 1.1
PDX1-201ENST00000381033 MCM10Q7L590 875 aa21.94■■□□□ 1.1
PDX1-201ENST00000381033 C8orf58Q8NAV2 365 aa21.94■■□□□ 1.1
PDX1-201ENST00000381033 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
PDX1-201ENST00000381033 NLRP6P59044 892 aa21.93■■□□□ 1.1
PDX1-201ENST00000381033 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
PDX1-201ENST00000381033 GLIPR1L2Q4G1C9 344 aa21.93■■□□□ 1.1
PDX1-201ENST00000381033 TAF7LQ5H9L4 462 aa21.93■■□□□ 1.1
PDX1-201ENST00000381033 ANKLE2Q86XL3 938 aa21.93■■□□□ 1.1
PDX1-201ENST00000381033 FOXO3O43524 673 aa21.92■■□□□ 1.1
PDX1-201ENST00000381033 ZNF853P0CG23 659 aa21.92■■□□□ 1.1
PDX1-201ENST00000381033 USP31Q70CQ4 1352 aa21.92■■□□□ 1.1
PDX1-201ENST00000381033 FAM161AQ3B820 660 aa21.9■■□□□ 1.1
PDX1-201ENST00000381033 GNAI1P63096 354 aa21.89■■□□□ 1.1
PDX1-201ENST00000381033 C14orf37Q86TY3 774 aa21.89■■□□□ 1.1
PDX1-201ENST00000381033 IFT57Q9NWB7 429 aa21.89■■□□□ 1.1
PDX1-201ENST00000381033 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
PDX1-201ENST00000381033 ZBTB47Q9UFB7 747 aaPredicted RBP21.88■■□□□ 1.09
PDX1-201ENST00000381033 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
PDX1-201ENST00000381033 TTC21AQ8NDW8 1320 aa21.88■■□□□ 1.09
PDX1-201ENST00000381033 AMPHP49418 695 aa21.88■■□□□ 1.09
PDX1-201ENST00000381033 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
PDX1-201ENST00000381033 ABTB2Q8N961 1025 aa21.87■■□□□ 1.09
PDX1-201ENST00000381033 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
PDX1-201ENST00000381033 PIK3C2AO00443 1686 aa21.87■■□□□ 1.09
PDX1-201ENST00000381033 TWISTNBQ3B726 338 aaPredicted RBP21.87■■□□□ 1.09
PDX1-201ENST00000381033 ALDH1L2Q3SY69 923 aa21.85■■□□□ 1.09
PDX1-201ENST00000381033 MRPL50Q8N5N7 158 aaKnown RBP21.85■■□□□ 1.09
PDX1-201ENST00000381033 LTV1Q96GA3 475 aaPredicted RBP21.85■■□□□ 1.09
PDX1-201ENST00000381033 EYA1Q99502 592 aa21.85■■□□□ 1.09
PDX1-201ENST00000381033 KIF16BQ96L93 1317 aa21.85■■□□□ 1.09
PDX1-201ENST00000381033 SEC24BO95487 1268 aa21.84■■□□□ 1.09
PDX1-201ENST00000381033 RBM10P98175 930 aaKnown RBP21.84■■□□□ 1.09
PDX1-201ENST00000381033 DDX19BQ9UMR2 479 aa21.84■■□□□ 1.09
PDX1-201ENST00000381033 CALD1Q05682 793 aaKnown RBP21.83■■□□□ 1.09
PDX1-201ENST00000381033 MTHFSDQ2M296 383 aaKnown RBP21.83■■□□□ 1.09
PDX1-201ENST00000381033 RWDD1Q9H446 243 aaPredicted RBP21.83■■□□□ 1.09
PDX1-201ENST00000381033 SLC4A3P48751 1232 aa21.83■■□□□ 1.09
PDX1-201ENST00000381033 XPCQ01831 940 aaPredicted RBP21.82■■□□□ 1.08
PDX1-201ENST00000381033 LMOD3Q0VAK6 560 aa21.82■■□□□ 1.08
PDX1-201ENST00000381033 C1orf115Q9H7X2 142 aa21.82■■□□□ 1.08
PDX1-201ENST00000381033 ZBTB40Q9NUA8 1239 aa21.82■■□□□ 1.08
PDX1-201ENST00000381033 IPO8O15397 1037 aaKnown RBP21.82■■□□□ 1.08
PDX1-201ENST00000381033 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
PDX1-201ENST00000381033 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
PDX1-201ENST00000381033 FLT4P35916 1363 aa21.81■■□□□ 1.08
PDX1-201ENST00000381033 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
PDX1-201ENST00000381033 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
PDX1-201ENST00000381033 NBR1Q14596 966 aa21.81■■□□□ 1.08
PDX1-201ENST00000381033 CHD2O14647 1828 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms