RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 PEAK1Q9H792 1746 aa27.17■■□□□ 1.94
TSSC4-203ENST00000380996 HNRNPUQ00839 825 aaKnown RBP eCLIP27.16■■□□□ 1.94
TSSC4-203ENST00000380996 PHRF1Q9P1Y6 1649 aaKnown RBP27.16■■□□□ 1.94
TSSC4-203ENST00000380996 CPDO75976 1380 aa27.16■■□□□ 1.94
TSSC4-203ENST00000380996 SHPRHQ149N8 1683 aa27.16■■□□□ 1.94
TSSC4-203ENST00000380996 PNNQ9H307 717 aaKnown RBP27.15■■□□□ 1.94
TSSC4-203ENST00000380996 COL16A1Q07092 1604 aaPredicted RBP27.14■■□□□ 1.94
TSSC4-203ENST00000380996 BLMP54132 1417 aaPredicted RBP27.14■■□□□ 1.94
TSSC4-203ENST00000380996 CRYBG1Q9Y4K1 1723 aa27.12■■□□□ 1.93
TSSC4-203ENST00000380996 LTN1O94822 1766 aa27.12■■□□□ 1.93
TSSC4-203ENST00000380996 KIAA0232Q92628 1395 aa27.11■■□□□ 1.93
TSSC4-203ENST00000380996 FCHSD2O94868 740 aa27.11■■□□□ 1.93
TSSC4-203ENST00000380996 PRDM11Q9NQV5 511 aa27.1■■□□□ 1.93
TSSC4-203ENST00000380996 RUNDC1Q96C34 613 aa27.09■■□□□ 1.93
TSSC4-203ENST00000380996 ABCC6O95255 1503 aa27.08■■□□□ 1.93
TSSC4-203ENST00000380996 COL22A1Q8NFW1 1626 aaPredicted RBP27.08■■□□□ 1.93
TSSC4-203ENST00000380996 CCDC146Q8IYE0 955 aa27.07■■□□□ 1.92
TSSC4-203ENST00000380996 LTV1Q96GA3 475 aaPredicted RBP27.07■■□□□ 1.92
TSSC4-203ENST00000380996 NEFMP07197 916 aa27.06■■□□□ 1.92
TSSC4-203ENST00000380996 CHRNA2Q15822 529 aa27.06■■□□□ 1.92
TSSC4-203ENST00000380996 AXIN2Q9Y2T1 843 aa27.06■■□□□ 1.92
TSSC4-203ENST00000380996 JCADQ9P266 1359 aa27.05■■□□□ 1.92
TSSC4-203ENST00000380996 HMOX1P09601 288 aa27.04■■□□□ 1.92
TSSC4-203ENST00000380996 HSPA1LP34931 641 aa27.04■■□□□ 1.92
TSSC4-203ENST00000380996 ANKRD24Q8TF21 1146 aa27.04■■□□□ 1.92
TSSC4-203ENST00000380996 EYA1Q99502 592 aa27.04■■□□□ 1.92
TSSC4-203ENST00000380996 RSPH6AQ9H0K4 717 aa27.04■■□□□ 1.92
TSSC4-203ENST00000380996 IGSF1Q8N6C5 1336 aa27.03■■□□□ 1.92
TSSC4-203ENST00000380996 SULT6B1Q6IMI4 303 aa27.03■■□□□ 1.92
TSSC4-203ENST00000380996 ABCA3Q99758 1704 aa27.03■■□□□ 1.92
TSSC4-203ENST00000380996 MAPK8IP3Q9UPT6 1336 aa27.02■■□□□ 1.92
TSSC4-203ENST00000380996 NGEFQ8N5V2 710 aa27.02■■□□□ 1.92
TSSC4-203ENST00000380996 ZBED9Q6R2W3 1325 aa27.02■■□□□ 1.92
TSSC4-203ENST00000380996 PLEKHF1Q96S99 279 aa27.01■■□□□ 1.91
TSSC4-203ENST00000380996 ERBB3P21860 1342 aa27.01■■□□□ 1.91
TSSC4-203ENST00000380996 APAF1O14727 1248 aa27■■□□□ 1.91
TSSC4-203ENST00000380996 PRKAR2BP31323 418 aa27■■□□□ 1.91
TSSC4-203ENST00000380996 FAM83GA6ND36 823 aa26.98■■□□□ 1.91
TSSC4-203ENST00000380996 CENPBP07199 599 aaPredicted RBP26.98■■□□□ 1.91
TSSC4-203ENST00000380996 TCP11L2Q8N4U5 519 aa26.98■■□□□ 1.91
TSSC4-203ENST00000380996 CSB-PGBD3P0DP91 1061 aa26.97■■□□□ 1.91
TSSC4-203ENST00000380996 AEBP1Q8IUX7 1158 aa26.97■■□□□ 1.91
TSSC4-203ENST00000380996 KDRP35968 1356 aa26.97■■□□□ 1.91
TSSC4-203ENST00000380996 COL18A1P39060 1754 aa26.97■■□□□ 1.91
TSSC4-203ENST00000380996 RGPD1P0DJD0 1748 aa26.97■■□□□ 1.91
TSSC4-203ENST00000380996 NBPF6Q5VWK0 638 aa26.96■■□□□ 1.91
TSSC4-203ENST00000380996 NBPF4Q96M43 638 aa26.96■■□□□ 1.91
TSSC4-203ENST00000380996 NUTM2BA6NNL0 878 aaPredicted RBP26.95■■□□□ 1.91
TSSC4-203ENST00000380996 NUTM2EB1AL46 878 aaPredicted RBP26.95■■□□□ 1.91
TSSC4-203ENST00000380996 NUTM2AQ8IVF1 878 aaPredicted RBP26.95■■□□□ 1.91
TSSC4-203ENST00000380996 SPATA31A6Q5VVP1 1343 aa26.95■■□□□ 1.91
TSSC4-203ENST00000380996 NCBP3Q53F19 620 aaKnown RBP26.95■■□□□ 1.9
TSSC4-203ENST00000380996 SENP3-EIF4A1A0A087X0R7 540 aa26.94■■□□□ 1.9
TSSC4-203ENST00000380996 SALL2Q9Y467 1007 aaPredicted RBP26.94■■□□□ 1.9
TSSC4-203ENST00000380996 ADAMTS2O95450 1211 aa26.93■■□□□ 1.9
TSSC4-203ENST00000380996 NLRP2Q9NX02 1062 aa26.93■■□□□ 1.9
TSSC4-203ENST00000380996 EVA1CP58658 441 aa26.92■■□□□ 1.9
TSSC4-203ENST00000380996 LMO7Q8WWI1 1683 aa26.91■■□□□ 1.9
TSSC4-203ENST00000380996 CAMTA1Q9Y6Y1 1673 aa26.91■■□□□ 1.9
TSSC4-203ENST00000380996 USHBP1Q8N6Y0 703 aa26.9■■□□□ 1.9
TSSC4-203ENST00000380996 WDR17Q8IZU2 1322 aa26.9■■□□□ 1.9
TSSC4-203ENST00000380996 TMPOP42166 694 aaKnown RBP26.9■■□□□ 1.9
TSSC4-203ENST00000380996 PHACTR3Q96KR7 559 aa26.9■■□□□ 1.9
TSSC4-203ENST00000380996 BTG4Q9NY30 223 aa26.9■■□□□ 1.9
TSSC4-203ENST00000380996 COL14A1Q05707 1796 aaKnown RBP26.89■■□□□ 1.9
TSSC4-203ENST00000380996 COL5A2P05997 1499 aaPredicted RBP26.89■■□□□ 1.9
TSSC4-203ENST00000380996 NEUROD2Q15784 382 aa26.89■■□□□ 1.89
TSSC4-203ENST00000380996 NCAPD2Q15021 1401 aa26.89■■□□□ 1.89
TSSC4-203ENST00000380996 NFE2L2Q16236 605 aa26.88■■□□□ 1.89
TSSC4-203ENST00000380996 RRP7AQ9Y3A4 280 aaKnown RBP26.88■■□□□ 1.89
TSSC4-203ENST00000380996 RGPD5Q99666 1765 aa26.87■■□□□ 1.89
TSSC4-203ENST00000380996 CCDC27Q2M243 656 aa26.87■■□□□ 1.89
TSSC4-203ENST00000380996 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
TSSC4-203ENST00000380996 TOM1L2Q6ZVM7 507 aa26.86■■□□□ 1.89
TSSC4-203ENST00000380996 STRN4Q9NRL3 753 aa26.86■■□□□ 1.89
TSSC4-203ENST00000380996 RIPK4P57078 832 aa26.85■■□□□ 1.89
TSSC4-203ENST00000380996 FAM208AQ9UK61 1670 aaKnown RBP26.85■■□□□ 1.89
TSSC4-203ENST00000380996 GAS2L2Q8NHY3 880 aa26.83■■□□□ 1.89
TSSC4-203ENST00000380996 RAPGEF4Q8WZA2 1011 aa26.83■■□□□ 1.89
TSSC4-203ENST00000380996 CARD10Q9BWT7 1032 aa26.83■■□□□ 1.89
TSSC4-203ENST00000380996 ZNF521Q96K83 1311 aa26.82■■□□□ 1.88
TSSC4-203ENST00000380996 LMOD3Q0VAK6 560 aa26.82■■□□□ 1.88
TSSC4-203ENST00000380996 WWC1Q8IX03 1113 aa26.82■■□□□ 1.88
TSSC4-203ENST00000380996 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
TSSC4-203ENST00000380996 LARP1Q6PKG0 1096 aaKnown RBP26.81■■□□□ 1.88
TSSC4-203ENST00000380996 AMOTQ4VCS5 1084 aa26.8■■□□□ 1.88
TSSC4-203ENST00000380996 PLEKHO1Q53GL0 409 aaPredicted RBP26.8■■□□□ 1.88
TSSC4-203ENST00000380996 CRB1P82279 1406 aa26.79■■□□□ 1.88
TSSC4-203ENST00000380996 TATP17735 454 aaPredicted RBP26.79■■□□□ 1.88
TSSC4-203ENST00000380996 GOLGA2Q08379 1002 aa26.79■■□□□ 1.88
TSSC4-203ENST00000380996 MTHFSDQ2M296 383 aaKnown RBP26.79■■□□□ 1.88
TSSC4-203ENST00000380996 NGLY1Q96IV0 654 aa26.79■■□□□ 1.88
TSSC4-203ENST00000380996 PLEKHG2Q9H7P9 1386 aa26.79■■□□□ 1.88
TSSC4-203ENST00000380996 RGPD2P0DJD1 1756 aa26.78■■□□□ 1.88
TSSC4-203ENST00000380996 WDR63Q8IWG1 891 aa26.78■■□□□ 1.88
TSSC4-203ENST00000380996 C8orf37Q96NL8 207 aa26.78■■□□□ 1.88
TSSC4-203ENST00000380996 MEX3CQ5U5Q3 659 aaKnown RBP26.77■■□□□ 1.88
TSSC4-203ENST00000380996 TRIM35Q9UPQ4 493 aa26.77■■□□□ 1.88
TSSC4-203ENST00000380996 SLIT2O94813 1529 aa26.76■■□□□ 1.87
TSSC4-203ENST00000380996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms