RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 WDR78Q5VTH9 848 aa17.92■□□□□ 0.46
SHROOM2-201ENST00000380913 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
SHROOM2-201ENST00000380913 TAF4BQ92750 862 aa17.91■□□□□ 0.46
SHROOM2-201ENST00000380913 JAKMIP3Q5VZ66 844 aa17.91■□□□□ 0.46
SHROOM2-201ENST00000380913 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
SHROOM2-201ENST00000380913 LIG1P18858 919 aa17.91■□□□□ 0.46
SHROOM2-201ENST00000380913 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
SHROOM2-201ENST00000380913 RNF187Q5TA31 235 aaPredicted RBP17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 TMCO3Q6UWJ1 677 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 ATF3P18847 181 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 TMCO5BA8MYB1 307 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 STAMBPO95630 424 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 CCDC192P0DO97 292 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 CCDC178Q5BJE1 867 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 CCDC158Q5M9N0 1113 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 ZNF526Q8TF50 670 aaPredicted RBP17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 UBA5Q9GZZ9 404 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 GSTTP1A0A1W2PQM5 241 aa17.9■□□□□ 0.46
SHROOM2-201ENST00000380913 DDX23Q9BUQ8 820 aaKnown RBP17.89■□□□□ 0.46
SHROOM2-201ENST00000380913 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.46
SHROOM2-201ENST00000380913 MYL6BP14649 208 aa17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 TRIM22Q8IYM9 498 aa17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
SHROOM2-201ENST00000380913 CAMK4Q16566 473 aa17.88■□□□□ 0.45
SHROOM2-201ENST00000380913 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
SHROOM2-201ENST00000380913 DACH1Q9UI36 760 aa17.88■□□□□ 0.45
SHROOM2-201ENST00000380913 CUX2O14529 1486 aa17.88■□□□□ 0.45
SHROOM2-201ENST00000380913 GRIPAP1Q4V328 841 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 GNAI1P63096 354 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 CBX1P83916 185 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 BICDL1Q6ZP65 573 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 TMEM87AQ8NBN3 555 aa17.87■□□□□ 0.45
SHROOM2-201ENST00000380913 POLR3GO15318 223 aaPredicted RBP17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 KLHL10Q6JEL2 608 aa17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 RAI14Q9P0K7 980 aa17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 IFFO1Q0D2I5 559 aa17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 MBD3O95983 291 aa17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 USP8P40818 1118 aa17.86■□□□□ 0.45
SHROOM2-201ENST00000380913 DDX54Q8TDD1 881 aaKnown RBP17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 PDCP20941 246 aa17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 CEP57L1Q8IYX8 460 aa17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 CRACR2AQ9BSW2 395 aa17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 BMP2KQ9NSY1 1161 aaPredicted RBP17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 GNL3LQ9NVN8 582 aaKnown RBP17.85■□□□□ 0.45
SHROOM2-201ENST00000380913 TDO2P48775 406 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 DDX11Q96FC9 970 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 CYP46A1Q9Y6A2 500 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 IQCEQ6IPM2 695 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 ARHGAP29Q52LW3 1261 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 CA8P35219 290 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
SHROOM2-201ENST00000380913 CFAP100Q494V2 611 aa17.83■□□□□ 0.45
SHROOM2-201ENST00000380913 SF3B2Q13435 895 aaKnown RBP17.83■□□□□ 0.45
SHROOM2-201ENST00000380913 CCDC144AA2RUR9 1427 aa17.83■□□□□ 0.45
SHROOM2-201ENST00000380913 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
SHROOM2-201ENST00000380913 ZBTB9Q96C00 473 aa17.83■□□□□ 0.44
SHROOM2-201ENST00000380913 NOL7Q9UMY1 257 aaKnown RBP17.83■□□□□ 0.44
SHROOM2-201ENST00000380913 SHTN1A0MZ66 631 aa17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 CBFA2T2O43439 604 aa17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 SPATA32Q96LK8 384 aa17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 TXLNBQ8N3L3 684 aa17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 ZBED9Q6R2W3 1325 aa17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 APBB1IPQ7Z5R6 666 aaPredicted RBP17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 UPF3BQ9BZI7 483 aaKnown RBP17.82■□□□□ 0.44
SHROOM2-201ENST00000380913 PPM1EQ8WY54 764 aa17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 VGFO15240 615 aaPredicted RBP17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 NACAP1Q9BZK3 213 aa17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 POTEJP0CG39 1038 aa17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 NLRP6P59044 892 aa17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
SHROOM2-201ENST00000380913 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 ATP2C2O75185 946 aa17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 SPTY2D1Q68D10 685 aaPredicted RBP17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 FANCIQ9NVI1 1328 aa17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 TRIM21P19474 475 aaKnown RBP17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 ARL1P40616 181 aaPredicted RBP17.8■□□□□ 0.44
SHROOM2-201ENST00000380913 CTNNA2P26232 953 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 KRT85P78386 507 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 LUZP1Q86V48 1076 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms