RNA–Protein interactions for RNA: ENST00000380486.3

C2CD2-202, Transcript of C2 calcium dependent domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD2, Length 6,345 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-202ENST00000380486 CWC27Q6UX04 472 aaKnown RBP22.78■■□□□ 1.24
C2CD2-202ENST00000380486 ZNHIT6Q9NWK9 470 aaKnown RBP22.78■■□□□ 1.24
C2CD2-202ENST00000380486 FKBP4Q02790 459 aaKnown RBP eCLIP22.77■■□□□ 1.24
C2CD2-202ENST00000380486 CCP110O43303 1012 aa22.77■■□□□ 1.24
C2CD2-202ENST00000380486 TAF3Q5VWG9 929 aa22.77■■□□□ 1.24
C2CD2-202ENST00000380486 MTERF4Q7Z6M4 381 aaKnown RBP22.77■■□□□ 1.24
C2CD2-202ENST00000380486 CCDC158Q5M9N0 1113 aa22.76■■□□□ 1.23
C2CD2-202ENST00000380486 GNAI3P08754 354 aa22.76■■□□□ 1.23
C2CD2-202ENST00000380486 LARP1BQ659C4 914 aaKnown RBP22.76■■□□□ 1.23
C2CD2-202ENST00000380486 KIAA0754O94854 1291 aa22.75■■□□□ 1.23
C2CD2-202ENST00000380486 SSBP05455 408 aaKnown RBP eCLIP22.75■■□□□ 1.23
C2CD2-202ENST00000380486 LRRFIP2Q9Y608 721 aaKnown RBP22.75■■□□□ 1.23
C2CD2-202ENST00000380486 CCDC85AQ96PX6 553 aaPredicted RBP22.75■■□□□ 1.23
C2CD2-202ENST00000380486 FILIP1Q7Z7B0 1213 aa22.74■■□□□ 1.23
C2CD2-202ENST00000380486 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
C2CD2-202ENST00000380486 PROSER2Q86WR7 435 aaPredicted RBP22.74■■□□□ 1.23
C2CD2-202ENST00000380486 CCDC102AQ96A19 550 aa22.74■■□□□ 1.23
C2CD2-202ENST00000380486 ERLIN2O94905 339 aa22.74■■□□□ 1.23
C2CD2-202ENST00000380486 DDX11Q96FC9 970 aa22.74■■□□□ 1.23
C2CD2-202ENST00000380486 SLC3A2P08195 630 aaKnown RBP22.73■■□□□ 1.23
C2CD2-202ENST00000380486 SPATA32Q96LK8 384 aa22.73■■□□□ 1.23
C2CD2-202ENST00000380486 IL1RAPL2Q9NP60 686 aa22.73■■□□□ 1.23
C2CD2-202ENST00000380486 DDX54Q8TDD1 881 aaKnown RBP22.72■■□□□ 1.23
C2CD2-202ENST00000380486 JAKMIP1Q96N16 626 aaKnown RBP22.72■■□□□ 1.23
C2CD2-202ENST00000380486 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
C2CD2-202ENST00000380486 PTPRGP23470 1445 aa22.72■■□□□ 1.23
C2CD2-202ENST00000380486 AACSQ86V21 672 aa22.72■■□□□ 1.23
C2CD2-202ENST00000380486 PDRG1Q9NUG6 133 aa22.72■■□□□ 1.23
C2CD2-202ENST00000380486 CFAP70Q5T0N1 1121 aa22.71■■□□□ 1.23
C2CD2-202ENST00000380486 SYCE3A1L190 88 aa22.71■■□□□ 1.23
C2CD2-202ENST00000380486 PDCP20941 246 aa22.71■■□□□ 1.23
C2CD2-202ENST00000380486 HIP1O00291 1037 aa22.71■■□□□ 1.23
C2CD2-202ENST00000380486 GCC1Q96CN9 775 aa22.71■■□□□ 1.23
C2CD2-202ENST00000380486 MATR3P43243 847 aaKnown RBP eCLIP22.7■■□□□ 1.23
C2CD2-202ENST00000380486 NUTM1Q86Y26 1132 aa22.7■■□□□ 1.22
C2CD2-202ENST00000380486 BRD4O60885 1362 aaPredicted RBP22.7■■□□□ 1.22
C2CD2-202ENST00000380486 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
C2CD2-202ENST00000380486 CBX1P83916 185 aa22.69■■□□□ 1.22
C2CD2-202ENST00000380486 SULT6B1Q6IMI4 303 aa22.69■■□□□ 1.22
C2CD2-202ENST00000380486 HDGFL1Q5TGJ6 251 aa22.69■■□□□ 1.22
C2CD2-202ENST00000380486 SSR1P43307 286 aaKnown RBP22.68■■□□□ 1.22
C2CD2-202ENST00000380486 CHD1LQ86WJ1 897 aa22.68■■□□□ 1.22
C2CD2-202ENST00000380486 MCM2P49736 904 aa22.68■■□□□ 1.22
C2CD2-202ENST00000380486 HMGN5P82970 282 aaKnown RBP22.68■■□□□ 1.22
C2CD2-202ENST00000380486 WDR33Q9C0J8 1336 aaKnown RBP22.68■■□□□ 1.22
C2CD2-202ENST00000380486 KRT85P78386 507 aa22.68■■□□□ 1.22
C2CD2-202ENST00000380486 NBPF1Q3BBV0 1214 aa22.68■■□□□ 1.22
C2CD2-202ENST00000380486 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
C2CD2-202ENST00000380486 GPRASP1Q5JY77 1395 aa22.68■■□□□ 1.22
C2CD2-202ENST00000380486 BACH2Q9BYV9 841 aa22.67■■□□□ 1.22
C2CD2-202ENST00000380486 ERC1Q8IUD2 1116 aa22.67■■□□□ 1.22
C2CD2-202ENST00000380486 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.67■■□□□ 1.22
C2CD2-202ENST00000380486 SMARCA5O60264 1052 aaPredicted RBP22.67■■□□□ 1.22
C2CD2-202ENST00000380486 PRAM1Q96QH2 718 aa22.66■■□□□ 1.22
C2CD2-202ENST00000380486 MIS18AQ9NYP9 233 aa22.66■■□□□ 1.22
C2CD2-202ENST00000380486 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
C2CD2-202ENST00000380486 PAXIP1Q6ZW49 1069 aaPredicted RBP22.66■■□□□ 1.22
C2CD2-202ENST00000380486 KIAA1328Q86T90 577 aa22.66■■□□□ 1.22
C2CD2-202ENST00000380486 GAS2L2Q8NHY3 880 aa22.66■■□□□ 1.22
C2CD2-202ENST00000380486 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
C2CD2-202ENST00000380486 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
C2CD2-202ENST00000380486 TRIM22Q8IYM9 498 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 NUP62CLQ9H1M0 184 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 STIM1Q13586 685 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 TOM1L2Q6ZVM7 507 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 CASTP20810 708 aaKnown RBP22.65■■□□□ 1.22
C2CD2-202ENST00000380486 DNA2P51530 1060 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 LARP6Q9BRS8 491 aaKnown RBP22.65■■□□□ 1.22
C2CD2-202ENST00000380486 USP5P45974 858 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 CABP4P57796 275 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 DACH1Q9UI36 760 aa22.65■■□□□ 1.22
C2CD2-202ENST00000380486 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.22
C2CD2-202ENST00000380486 CHMP4BP1P59074 171 aa22.64■■□□□ 1.21
C2CD2-202ENST00000380486 BICDL1Q6ZP65 573 aa22.64■■□□□ 1.21
C2CD2-202ENST00000380486 FERMT3Q86UX7 667 aa22.64■■□□□ 1.21
C2CD2-202ENST00000380486 UPF3BQ9BZI7 483 aaKnown RBP22.64■■□□□ 1.21
C2CD2-202ENST00000380486 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
C2CD2-202ENST00000380486 MPHOSPH10O00566 681 aaKnown RBP22.63■■□□□ 1.21
C2CD2-202ENST00000380486 DHX8Q14562 1220 aaKnown RBP22.63■■□□□ 1.21
C2CD2-202ENST00000380486 RRS1Q15050 365 aaKnown RBP22.63■■□□□ 1.21
C2CD2-202ENST00000380486 ZSCAN29Q8IWY8 852 aaPredicted RBP22.63■■□□□ 1.21
C2CD2-202ENST00000380486 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
C2CD2-202ENST00000380486 ZRSR2Q15696 482 aaKnown RBP22.63■■□□□ 1.21
C2CD2-202ENST00000380486 SOGA3Q5TF21 947 aa22.62■■□□□ 1.21
C2CD2-202ENST00000380486 CCDC113Q9H0I3 377 aa22.62■■□□□ 1.21
C2CD2-202ENST00000380486 TDO2P48775 406 aa22.62■■□□□ 1.21
C2CD2-202ENST00000380486 PPM1FP49593 454 aaPredicted RBP22.62■■□□□ 1.21
C2CD2-202ENST00000380486 CBFA2T2O43439 604 aa22.62■■□□□ 1.21
C2CD2-202ENST00000380486 PIP4K2AP48426 406 aaPredicted RBP22.62■■□□□ 1.21
C2CD2-202ENST00000380486 CCDC83Q8IWF9 413 aa22.61■■□□□ 1.21
C2CD2-202ENST00000380486 ERLIN1O75477 346 aa22.61■■□□□ 1.21
C2CD2-202ENST00000380486 GUCY1B3Q02153 619 aa22.61■■□□□ 1.21
C2CD2-202ENST00000380486 ANKRD1Q15327 319 aa22.61■■□□□ 1.21
C2CD2-202ENST00000380486 BLOC1S2Q6QNY1 142 aa22.61■■□□□ 1.21
C2CD2-202ENST00000380486 SRGAP3O43295 1099 aa22.61■■□□□ 1.21
C2CD2-202ENST00000380486 EIF3JO75822 258 aaKnown RBP22.6■■□□□ 1.21
C2CD2-202ENST00000380486 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
C2CD2-202ENST00000380486 AAMPQ13685 434 aa22.6■■□□□ 1.21
C2CD2-202ENST00000380486 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms