RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 NFAT5O94916 1531 aa34.6■■■■□ 3.13
TNFRSF4-201ENST00000379236 LTN1O94822 1766 aa34.59■■■■□ 3.13
TNFRSF4-201ENST00000379236 PDE3BQ13370 1112 aa34.59■■■■□ 3.13
TNFRSF4-201ENST00000379236 PARP4Q9UKK3 1724 aaKnown RBP34.58■■■■□ 3.13
TNFRSF4-201ENST00000379236 TMF1P82094 1093 aa34.58■■■■□ 3.13
TNFRSF4-201ENST00000379236 DEFB132Q7Z7B7 95 aa34.58■■■■□ 3.13
TNFRSF4-201ENST00000379236 TOM1L2Q6ZVM7 507 aa34.57■■■■□ 3.12
TNFRSF4-201ENST00000379236 ARHGEF25Q86VW2 580 aa34.57■■■■□ 3.12
TNFRSF4-201ENST00000379236 NME9Q86XW9 330 aa34.57■■■■□ 3.12
TNFRSF4-201ENST00000379236 USP31Q70CQ4 1352 aa34.57■■■■□ 3.12
TNFRSF4-201ENST00000379236 WNK3Q9BYP7 1800 aa34.56■■■■□ 3.12
TNFRSF4-201ENST00000379236 BAG6P46379 1132 aa34.56■■■■□ 3.12
TNFRSF4-201ENST00000379236 CCER1Q8TC90 406 aaPredicted RBP34.55■■■■□ 3.12
TNFRSF4-201ENST00000379236 CSB-PGBD3P0DP91 1061 aa34.53■■■■□ 3.12
TNFRSF4-201ENST00000379236 ABCC6O95255 1503 aa34.53■■■■□ 3.12
TNFRSF4-201ENST00000379236 TNS1Q9HBL0 1735 aaKnown RBP34.52■■■■□ 3.12
TNFRSF4-201ENST00000379236 FAM196AQ6ZSG2 479 aa34.52■■■■□ 3.12
TNFRSF4-201ENST00000379236 WDR17Q8IZU2 1322 aa34.52■■■■□ 3.12
TNFRSF4-201ENST00000379236 AXIN2Q9Y2T1 843 aa34.51■■■■□ 3.12
TNFRSF4-201ENST00000379236 CDCA8Q53HL2 280 aa34.5■■■■□ 3.11
TNFRSF4-201ENST00000379236 LRRC37A3O60309 1634 aa34.47■■■■□ 3.11
TNFRSF4-201ENST00000379236 ANKRD36BQ8N2N9 1353 aa34.46■■■■□ 3.11
TNFRSF4-201ENST00000379236 OVOS2A0A0J9YW53 1432 aa34.44■■■■□ 3.1
TNFRSF4-201ENST00000379236 OVOS2Q6IE36 1432 aa34.44■■■■□ 3.1
TNFRSF4-201ENST00000379236 TRIM37O94972 964 aa34.43■■■■□ 3.1
TNFRSF4-201ENST00000379236 DDB1Q16531 1140 aa34.41■■■■□ 3.1
TNFRSF4-201ENST00000379236 COG3Q96JB2 828 aa34.41■■■■□ 3.1
TNFRSF4-201ENST00000379236 CDCA7Q9BWT1 371 aaPredicted RBP34.4■■■■□ 3.1
TNFRSF4-201ENST00000379236 CARD10Q9BWT7 1032 aa34.4■■■■□ 3.1
TNFRSF4-201ENST00000379236 KIF20BQ96Q89 1820 aa34.39■■■■□ 3.1
TNFRSF4-201ENST00000379236 EN1Q05925 392 aaPredicted RBP34.39■■■■□ 3.1
TNFRSF4-201ENST00000379236 C11orf95C9JLR9 678 aaPredicted RBP34.38■■■■□ 3.09
TNFRSF4-201ENST00000379236 CCDC7Q96M83 1385 aa34.37■■■■□ 3.09
TNFRSF4-201ENST00000379236 OVOS2A0A0G2JMS6 1433 aa34.37■■■■□ 3.09
TNFRSF4-201ENST00000379236 DISP2A7MBM2 1401 aa34.37■■■■□ 3.09
TNFRSF4-201ENST00000379236 MYOM1P52179 1685 aa34.35■■■■□ 3.09
TNFRSF4-201ENST00000379236 APBA3O96018 575 aa34.34■■■■□ 3.09
TNFRSF4-201ENST00000379236 SBF2Q86WG5 1849 aa34.34■■■■□ 3.09
TNFRSF4-201ENST00000379236 ERBB3P21860 1342 aa34.33■■■■□ 3.09
TNFRSF4-201ENST00000379236 FAM208AQ9UK61 1670 aaKnown RBP34.33■■■■□ 3.09
TNFRSF4-201ENST00000379236 PEAK1Q9H792 1746 aa34.33■■■■□ 3.09
TNFRSF4-201ENST00000379236 NLRP2Q9NX02 1062 aa34.32■■■■□ 3.08
TNFRSF4-201ENST00000379236 ANKRD24Q8TF21 1146 aa34.3■■■■□ 3.08
TNFRSF4-201ENST00000379236 EZH2Q15910 746 aaKnown RBP34.27■■■■□ 3.08
TNFRSF4-201ENST00000379236 PARD3Q8TEW0 1356 aa34.26■■■■□ 3.08
TNFRSF4-201ENST00000379236 EXOC5O00471 708 aa34.26■■■■□ 3.08
TNFRSF4-201ENST00000379236 AMPHP49418 695 aa34.25■■■■□ 3.07
TNFRSF4-201ENST00000379236 IP6K1Q92551 441 aa34.25■■■■□ 3.07
TNFRSF4-201ENST00000379236 POLR3GLQ9BT43 218 aa34.25■■■■□ 3.07
TNFRSF4-201ENST00000379236 GGNBP2Q9H3C7 697 aa34.25■■■■□ 3.07
TNFRSF4-201ENST00000379236 RREB1Q92766 1687 aa34.25■■■■□ 3.07
TNFRSF4-201ENST00000379236 EIF4G2P78344 907 aaKnown RBP eCLIP34.24■■■■□ 3.07
TNFRSF4-201ENST00000379236 LTV1Q96GA3 475 aaPredicted RBP34.23■■■■□ 3.07
TNFRSF4-201ENST00000379236 TNS2Q63HR2 1409 aa34.22■■■■□ 3.07
TNFRSF4-201ENST00000379236 FYB1O15117 783 aa34.22■■■■□ 3.07
TNFRSF4-201ENST00000379236 CAMKK2Q96RR4 588 aa34.22■■■■□ 3.07
TNFRSF4-201ENST00000379236 MAP3K19Q56UN5 1328 aa34.22■■■■□ 3.07
TNFRSF4-201ENST00000379236 PSDA5PKW4 1024 aaPredicted RBP34.21■■■■□ 3.07
TNFRSF4-201ENST00000379236 IL2RBP14784 551 aa34.2■■■■□ 3.07
TNFRSF4-201ENST00000379236 MARCH10Q8NA82 808 aaPredicted RBP34.2■■■■□ 3.07
TNFRSF4-201ENST00000379236 NSD3Q9BZ95 1437 aa34.2■■■■□ 3.06
TNFRSF4-201ENST00000379236 NUP188Q5SRE5 1749 aa34.19■■■■□ 3.06
TNFRSF4-201ENST00000379236 RGPD3A6NKT7 1758 aaPredicted RBP34.18■■■■□ 3.06
TNFRSF4-201ENST00000379236 RGPD4Q7Z3J3 1758 aa34.18■■■■□ 3.06
TNFRSF4-201ENST00000379236 RGPD2P0DJD1 1756 aa34.18■■■■□ 3.06
TNFRSF4-201ENST00000379236 RTL1A6NKG5 1358 aa34.17■■■■□ 3.06
TNFRSF4-201ENST00000379236 HOXC9P31274 260 aa34.17■■■■□ 3.06
TNFRSF4-201ENST00000379236 FBLN1P23142 703 aa34.16■■■■□ 3.06
TNFRSF4-201ENST00000379236 HSPA5P11021 654 aaKnown RBP34.15■■■■□ 3.06
TNFRSF4-201ENST00000379236 KAT6BQ8WYB5 2073 aa34.15■■■■□ 3.06
TNFRSF4-201ENST00000379236 RRS1Q15050 365 aaKnown RBP34.14■■■■□ 3.06
TNFRSF4-201ENST00000379236 BCL9O00512 1426 aa34.13■■■■□ 3.05
TNFRSF4-201ENST00000379236 R3HDM1Q15032 1099 aaKnown RBP34.13■■■■□ 3.05
TNFRSF4-201ENST00000379236 BCL11BQ9C0K0 894 aaPredicted RBP34.13■■■■□ 3.05
TNFRSF4-201ENST00000379236 SMG6Q86US8 1419 aaKnown RBP34.13■■■■□ 3.05
TNFRSF4-201ENST00000379236 SRCAPQ6ZRS2 3230 aa34.11■■■■□ 3.05
TNFRSF4-201ENST00000379236 NBPF14Q5TI25 921 aa34.11■■■■□ 3.05
TNFRSF4-201ENST00000379236 CARD14Q9BXL6 1004 aa34.11■■■■□ 3.05
TNFRSF4-201ENST00000379236 LRP5O75197 1615 aa34.09■■■■□ 3.05
TNFRSF4-201ENST00000379236 NHSQ6T4R5 1651 aa34.09■■■■□ 3.05
TNFRSF4-201ENST00000379236 CGNL1Q0VF96 1302 aa34.07■■■■□ 3.05
TNFRSF4-201ENST00000379236 ANKRD26Q9UPS8 1709 aa34.07■■■■□ 3.04
TNFRSF4-201ENST00000379236 MAP2P11137 1827 aaKnown RBP34.05■■■■□ 3.04
TNFRSF4-201ENST00000379236 PLSCR1O15162 318 aa34.04■■■■□ 3.04
TNFRSF4-201ENST00000379236 FLT4P35916 1363 aa34.03■■■■□ 3.04
TNFRSF4-201ENST00000379236 KIF24Q5T7B8 1368 aa34.02■■■■□ 3.04
TNFRSF4-201ENST00000379236 PTF1AQ7RTS3 328 aa34.01■■■■□ 3.03
TNFRSF4-201ENST00000379236 ACSBG1Q96GR2 724 aa34■■■■□ 3.03
TNFRSF4-201ENST00000379236 INSRP06213 1382 aa33.99■■■■□ 3.03
TNFRSF4-201ENST00000379236 DDX54Q8TDD1 881 aaKnown RBP33.99■■■■□ 3.03
TNFRSF4-201ENST00000379236 BTAF1O14981 1849 aa33.98■■■■□ 3.03
TNFRSF4-201ENST00000379236 PPM1GO15355 546 aaPredicted RBP33.96■■■■□ 3.03
TNFRSF4-201ENST00000379236 HSP90AB2PQ58FF8 381 aa33.96■■■■□ 3.03
TNFRSF4-201ENST00000379236 SHANK3Q9BYB0 1731 aa33.95■■■■□ 3.03
TNFRSF4-201ENST00000379236 KCNQ2O43526 872 aa33.94■■■■□ 3.02
TNFRSF4-201ENST00000379236 NBPF6Q5VWK0 638 aa33.94■■■■□ 3.02
TNFRSF4-201ENST00000379236 NBPF4Q96M43 638 aa33.94■■■■□ 3.02
TNFRSF4-201ENST00000379236 EMILIN1Q9Y6C2 1016 aa33.94■■■■□ 3.02
TNFRSF4-201ENST00000379236 USHBP1Q8N6Y0 703 aa33.93■■■■□ 3.02
TNFRSF4-201ENST00000379236 RAPGEF4Q8WZA2 1011 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms