RNA–Protein interactions for RNA: ENST00000378705.3

DMD-210, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-210ENST00000378705 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
DMD-210ENST00000378705 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
DMD-210ENST00000378705 LTN1O94822 1766 aa11.09□□□□□ -0.63
DMD-210ENST00000378705 COL14A1Q05707 1796 aaKnown RBP11.09□□□□□ -0.63
DMD-210ENST00000378705 ANP32AP39687 249 aaKnown RBP11.09□□□□□ -0.63
DMD-210ENST00000378705 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
DMD-210ENST00000378705 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
DMD-210ENST00000378705 SLIT3O75094 1523 aa11.09□□□□□ -0.63
DMD-210ENST00000378705 PARD3Q8TEW0 1356 aa11.08□□□□□ -0.64
DMD-210ENST00000378705 GCP02774 474 aa11.08□□□□□ -0.64
DMD-210ENST00000378705 ZC3H6P61129 1189 aaKnown RBP11.08□□□□□ -0.64
DMD-210ENST00000378705 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
DMD-210ENST00000378705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.08□□□□□ -0.64
DMD-210ENST00000378705 ATRNO75882 1429 aa11.08□□□□□ -0.64
DMD-210ENST00000378705 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 KIAA0232Q92628 1395 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 RXRBP28702 533 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 NME9Q86XW9 330 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 PANK3Q9H999 370 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
DMD-210ENST00000378705 OVOS2A0A0J9YW53 1432 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 OVOS2Q6IE36 1432 aa11.07□□□□□ -0.64
DMD-210ENST00000378705 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
DMD-210ENST00000378705 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
DMD-210ENST00000378705 PDE3BQ13370 1112 aa11.06□□□□□ -0.64
DMD-210ENST00000378705 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
DMD-210ENST00000378705 PRDM11Q9NQV5 511 aa11.06□□□□□ -0.64
DMD-210ENST00000378705 CPDO75976 1380 aa11.05□□□□□ -0.64
DMD-210ENST00000378705 NFAT5O94916 1531 aa11.05□□□□□ -0.64
DMD-210ENST00000378705 TCERG1O14776 1098 aaKnown RBP11.05□□□□□ -0.64
DMD-210ENST00000378705 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
DMD-210ENST00000378705 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
DMD-210ENST00000378705 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
DMD-210ENST00000378705 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
DMD-210ENST00000378705 COL18A1P39060 1754 aa11.04□□□□□ -0.64
DMD-210ENST00000378705 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
DMD-210ENST00000378705 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
DMD-210ENST00000378705 MAP2P11137 1827 aaKnown RBP11.04□□□□□ -0.64
DMD-210ENST00000378705 GLI3P10071 1580 aa11.03□□□□□ -0.64
DMD-210ENST00000378705 VPS72Q15906 364 aa11.03□□□□□ -0.64
DMD-210ENST00000378705 KCNH5Q8NCM2 988 aa11.03□□□□□ -0.64
DMD-210ENST00000378705 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
DMD-210ENST00000378705 CAMTA1Q9Y6Y1 1673 aa11.03□□□□□ -0.64
DMD-210ENST00000378705 CGNL1Q0VF96 1302 aa11.03□□□□□ -0.64
DMD-210ENST00000378705 SOCS7O14512 581 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 FYB1O15117 783 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 SOX12O15370 315 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 MS4A1P11836 297 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 ZBTB47Q9UFB7 747 aaPredicted RBP11.02□□□□□ -0.65
DMD-210ENST00000378705 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 NSD2O96028 1365 aa11.02□□□□□ -0.65
DMD-210ENST00000378705 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
DMD-210ENST00000378705 GGNBP2Q9H3C7 697 aa11.01□□□□□ -0.65
DMD-210ENST00000378705 AATKQ6ZMQ8 1374 aa11.01□□□□□ -0.65
DMD-210ENST00000378705 RGS12O14924 1447 aa11.01□□□□□ -0.65
DMD-210ENST00000378705 ABCC6O95255 1503 aa11□□□□□ -0.65
DMD-210ENST00000378705 ZBTB7CA1YPR0 619 aa11□□□□□ -0.65
DMD-210ENST00000378705 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
DMD-210ENST00000378705 CNGB1Q14028 1251 aaPredicted RBP11□□□□□ -0.65
DMD-210ENST00000378705 NBR1Q14596 966 aa11□□□□□ -0.65
DMD-210ENST00000378705 COG3Q96JB2 828 aa11□□□□□ -0.65
DMD-210ENST00000378705 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
DMD-210ENST00000378705 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
DMD-210ENST00000378705 PEAK1Q9H792 1746 aa11□□□□□ -0.65
DMD-210ENST00000378705 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
DMD-210ENST00000378705 EVA1CP58658 441 aa10.99□□□□□ -0.65
DMD-210ENST00000378705 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
DMD-210ENST00000378705 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
DMD-210ENST00000378705 STRN4Q9NRL3 753 aa10.99□□□□□ -0.65
DMD-210ENST00000378705 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
DMD-210ENST00000378705 BRWD3Q6RI45 1802 aa10.99□□□□□ -0.65
DMD-210ENST00000378705 SPATA31A5Q5VU36 1347 aa10.99□□□□□ -0.65
DMD-210ENST00000378705 SPATA31A7Q8IWB4 1347 aa10.99□□□□□ -0.65
DMD-210ENST00000378705 COL5A2P05997 1499 aaPredicted RBP10.99□□□□□ -0.65
DMD-210ENST00000378705 FBLN1P23142 703 aa10.98□□□□□ -0.65
DMD-210ENST00000378705 LARP1Q6PKG0 1096 aaKnown RBP10.98□□□□□ -0.65
DMD-210ENST00000378705 NPC1L1Q9UHC9 1359 aa10.98□□□□□ -0.65
DMD-210ENST00000378705 FAM208AQ9UK61 1670 aaKnown RBP10.98□□□□□ -0.65
DMD-210ENST00000378705 PDE4AP27815 886 aa10.97□□□□□ -0.65
DMD-210ENST00000378705 BACH2Q9BYV9 841 aa10.97□□□□□ -0.65
DMD-210ENST00000378705 SPATA31A1Q5TZJ5 1347 aa10.97□□□□□ -0.65
DMD-210ENST00000378705 WNK3Q9BYP7 1800 aa10.96□□□□□ -0.65
DMD-210ENST00000378705 RGPD2P0DJD1 1756 aa10.96□□□□□ -0.65
DMD-210ENST00000378705 FAM98CQ17RN3 349 aaKnown RBP10.95□□□□□ -0.66
DMD-210ENST00000378705 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
DMD-210ENST00000378705 SEPT12Q8IYM1 358 aa10.95□□□□□ -0.66
DMD-210ENST00000378705 USP35Q9P2H5 1018 aa10.95□□□□□ -0.66
DMD-210ENST00000378705 THSD7AQ9UPZ6 1657 aa10.95□□□□□ -0.66
DMD-210ENST00000378705 CRB1P82279 1406 aa10.94□□□□□ -0.66
DMD-210ENST00000378705 RTL1A6NKG5 1358 aa10.94□□□□□ -0.66
DMD-210ENST00000378705 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
DMD-210ENST00000378705 WDR17Q8IZU2 1322 aa10.94□□□□□ -0.66
DMD-210ENST00000378705 SENP3-EIF4A1A0A087X0R7 540 aa10.94□□□□□ -0.66
DMD-210ENST00000378705 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
DMD-210ENST00000378705 RRS1Q15050 365 aaKnown RBP10.93□□□□□ -0.66
DMD-210ENST00000378705 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
DMD-210ENST00000378705 TOM1L2Q6ZVM7 507 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms