RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
PRPF18-202ENST00000378572 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
PRPF18-202ENST00000378572 OVOS2A0A0G2JMS6 1433 aa19.38■□□□□ 0.69
PRPF18-202ENST00000378572 OVOS2A0A0J9YW53 1432 aa19.38■□□□□ 0.69
PRPF18-202ENST00000378572 OVOS2Q6IE36 1432 aa19.38■□□□□ 0.69
PRPF18-202ENST00000378572 LRRC37A3O60309 1634 aa19.38■□□□□ 0.69
PRPF18-202ENST00000378572 DDB1Q16531 1140 aa19.37■□□□□ 0.69
PRPF18-202ENST00000378572 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
PRPF18-202ENST00000378572 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
PRPF18-202ENST00000378572 RREB1Q92766 1687 aa19.36■□□□□ 0.69
PRPF18-202ENST00000378572 NBPF14Q5TI25 921 aa19.36■□□□□ 0.69
PRPF18-202ENST00000378572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRPF18-202ENST00000378572 NUP188Q5SRE5 1749 aa19.35■□□□□ 0.69
PRPF18-202ENST00000378572 WNK3Q9BYP7 1800 aa19.35■□□□□ 0.69
PRPF18-202ENST00000378572 COL18A1P39060 1754 aa19.35■□□□□ 0.69
PRPF18-202ENST00000378572 C11orf95C9JLR9 678 aaPredicted RBP19.34■□□□□ 0.69
PRPF18-202ENST00000378572 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
PRPF18-202ENST00000378572 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
PRPF18-202ENST00000378572 ARHGEF25Q86VW2 580 aa19.34■□□□□ 0.69
PRPF18-202ENST00000378572 RGPD5Q99666 1765 aa19.33■□□□□ 0.69
PRPF18-202ENST00000378572 HDGFL2Q7Z4V5 671 aaPredicted RBP19.32■□□□□ 0.68
PRPF18-202ENST00000378572 SBNO2Q9Y2G9 1366 aa19.31■□□□□ 0.68
PRPF18-202ENST00000378572 NFAT5O94916 1531 aa19.31■□□□□ 0.68
PRPF18-202ENST00000378572 CDCA7Q9BWT1 371 aaPredicted RBP19.31■□□□□ 0.68
PRPF18-202ENST00000378572 PEAK1Q9H792 1746 aa19.3■□□□□ 0.68
PRPF18-202ENST00000378572 NME9Q86XW9 330 aa19.29■□□□□ 0.68
PRPF18-202ENST00000378572 CARD10Q9BWT7 1032 aa19.28■□□□□ 0.68
PRPF18-202ENST00000378572 SBF2Q86WG5 1849 aa19.27■□□□□ 0.67
PRPF18-202ENST00000378572 CCDC7Q96M83 1385 aa19.27■□□□□ 0.67
PRPF18-202ENST00000378572 ABCC6O95255 1503 aa19.26■□□□□ 0.67
PRPF18-202ENST00000378572 TERF2IPQ9NYB0 399 aa19.26■□□□□ 0.67
PRPF18-202ENST00000378572 MARCH10Q8NA82 808 aaPredicted RBP19.25■□□□□ 0.67
PRPF18-202ENST00000378572 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
PRPF18-202ENST00000378572 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
PRPF18-202ENST00000378572 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
PRPF18-202ENST00000378572 LTN1O94822 1766 aa19.25■□□□□ 0.67
PRPF18-202ENST00000378572 CD163L1Q9NR16 1453 aa19.25■□□□□ 0.67
PRPF18-202ENST00000378572 EXOC5O00471 708 aa19.25■□□□□ 0.67
PRPF18-202ENST00000378572 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
PRPF18-202ENST00000378572 EDC4Q6P2E9 1401 aaKnown RBP19.24■□□□□ 0.67
PRPF18-202ENST00000378572 RGPD3A6NKT7 1758 aaPredicted RBP19.24■□□□□ 0.67
PRPF18-202ENST00000378572 RGPD4Q7Z3J3 1758 aa19.24■□□□□ 0.67
PRPF18-202ENST00000378572 USP31Q70CQ4 1352 aa19.24■□□□□ 0.67
PRPF18-202ENST00000378572 A0A1W2PP64 1363 aa19.23■□□□□ 0.67
PRPF18-202ENST00000378572 TNS2Q63HR2 1409 aa19.22■□□□□ 0.67
PRPF18-202ENST00000378572 USP54Q70EL1 1684 aa19.22■□□□□ 0.67
PRPF18-202ENST00000378572 PTF1AQ7RTS3 328 aa19.22■□□□□ 0.67
PRPF18-202ENST00000378572 ERBB3P21860 1342 aa19.21■□□□□ 0.67
PRPF18-202ENST00000378572 PLSCR1O15162 318 aa19.21■□□□□ 0.67
PRPF18-202ENST00000378572 SPON1Q9HCB6 807 aa19.21■□□□□ 0.67
PRPF18-202ENST00000378572 ANKRD24Q8TF21 1146 aa19.2■□□□□ 0.66
PRPF18-202ENST00000378572 ST20-MTHFSA0A0A6YYL1 179 aa19.18■□□□□ 0.66
PRPF18-202ENST00000378572 LTV1Q96GA3 475 aaPredicted RBP19.18■□□□□ 0.66
PRPF18-202ENST00000378572 ANO8Q9HCE9 1232 aaPredicted RBP19.18■□□□□ 0.66
PRPF18-202ENST00000378572 KCNQ2O43526 872 aa19.17■□□□□ 0.66
PRPF18-202ENST00000378572 IL2RBP14784 551 aa19.17■□□□□ 0.66
PRPF18-202ENST00000378572 ACSBG1Q96GR2 724 aa19.17■□□□□ 0.66
PRPF18-202ENST00000378572 BCL9O00512 1426 aa19.17■□□□□ 0.66
PRPF18-202ENST00000378572 NINLQ9Y2I6 1382 aa19.16■□□□□ 0.66
PRPF18-202ENST00000378572 STK32BQ9NY57 414 aa19.16■□□□□ 0.66
PRPF18-202ENST00000378572 COG3Q96JB2 828 aa19.15■□□□□ 0.66
PRPF18-202ENST00000378572 NHSQ6T4R5 1651 aa19.15■□□□□ 0.66
PRPF18-202ENST00000378572 TXNRD1Q16881 649 aa19.14■□□□□ 0.66
PRPF18-202ENST00000378572 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.66
PRPF18-202ENST00000378572 DCAF8L1A6NGE4 600 aa19.13■□□□□ 0.65
PRPF18-202ENST00000378572 TESK2Q96S53 571 aa19.13■□□□□ 0.65
PRPF18-202ENST00000378572 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
PRPF18-202ENST00000378572 ZBTB7AO95365 584 aa19.12■□□□□ 0.65
PRPF18-202ENST00000378572 AMPHP49418 695 aa19.11■□□□□ 0.65
PRPF18-202ENST00000378572 PROM2Q8N271 834 aa19.11■□□□□ 0.65
PRPF18-202ENST00000378572 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
PRPF18-202ENST00000378572 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
PRPF18-202ENST00000378572 IP6K1Q92551 441 aa19.11■□□□□ 0.65
PRPF18-202ENST00000378572 KAT6BQ8WYB5 2073 aa19.1■□□□□ 0.65
PRPF18-202ENST00000378572 USP47Q96K76 1375 aa19.1■□□□□ 0.65
PRPF18-202ENST00000378572 TMF1P82094 1093 aa19.1■□□□□ 0.65
PRPF18-202ENST00000378572 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
PRPF18-202ENST00000378572 PDGFDQ9GZP0 370 aaPredicted RBP19.09■□□□□ 0.65
PRPF18-202ENST00000378572 ANKRD36BQ8N2N9 1353 aa19.09■□□□□ 0.65
PRPF18-202ENST00000378572 MAP3K19Q56UN5 1328 aa19.08■□□□□ 0.65
PRPF18-202ENST00000378572 SLC15A2Q16348 729 aa19.08■□□□□ 0.64
PRPF18-202ENST00000378572 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
PRPF18-202ENST00000378572 BTAF1O14981 1849 aa19.08■□□□□ 0.64
PRPF18-202ENST00000378572 HOXC9P31274 260 aa19.06■□□□□ 0.64
PRPF18-202ENST00000378572 SYTL4Q96C24 671 aaPredicted RBP19.06■□□□□ 0.64
PRPF18-202ENST00000378572 FBLN1P23142 703 aa19.05■□□□□ 0.64
PRPF18-202ENST00000378572 MYOM1P52179 1685 aa19.05■□□□□ 0.64
PRPF18-202ENST00000378572 GGNBP2Q9H3C7 697 aa19.05■□□□□ 0.64
PRPF18-202ENST00000378572 YY1P25490 414 aa19.04■□□□□ 0.64
PRPF18-202ENST00000378572 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
PRPF18-202ENST00000378572 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
PRPF18-202ENST00000378572 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
PRPF18-202ENST00000378572 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
PRPF18-202ENST00000378572 KIF20BQ96Q89 1820 aa19.02■□□□□ 0.64
PRPF18-202ENST00000378572 RGPD2P0DJD1 1756 aa19.02■□□□□ 0.63
PRPF18-202ENST00000378572 MTFR1LQ9H019 292 aa19.01■□□□□ 0.63
PRPF18-202ENST00000378572 DOT1LQ8TEK3 1739 aa19.01■□□□□ 0.63
PRPF18-202ENST00000378572 USHBP1Q8N6Y0 703 aa19■□□□□ 0.63
PRPF18-202ENST00000378572 PAPPAQ13219 1627 aa19■□□□□ 0.63
PRPF18-202ENST00000378572 MEGF6O75095 1541 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms