RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 AAMPQ13685 434 aa34.28■■■■□ 3.08
TPM2-203ENST00000378292 SSH1Q8WYL5 1049 aa34.28■■■■□ 3.08
TPM2-203ENST00000378292 CALD1Q05682 793 aaKnown RBP34.27■■■■□ 3.08
TPM2-203ENST00000378292 PEAK1Q9H792 1746 aa34.26■■■■□ 3.08
TPM2-203ENST00000378292 IGHDP01880 384 aa34.26■■■■□ 3.08
TPM2-203ENST00000378292 FMN2Q9NZ56 1722 aa34.25■■■■□ 3.07
TPM2-203ENST00000378292 THUMPD2Q9BTF0 503 aaKnown RBP34.25■■■■□ 3.07
TPM2-203ENST00000378292 SOX12O15370 315 aa34.25■■■■□ 3.07
TPM2-203ENST00000378292 LAS1LQ9Y4W2 734 aaKnown RBP34.25■■■■□ 3.07
TPM2-203ENST00000378292 CHD2O14647 1828 aaKnown RBP34.25■■■■□ 3.07
TPM2-203ENST00000378292 SETD1BQ9UPS6 1966 aaKnown RBP34.24■■■■□ 3.07
TPM2-203ENST00000378292 HSP90AB2PQ58FF8 381 aa34.24■■■■□ 3.07
TPM2-203ENST00000378292 LMOD3Q0VAK6 560 aa34.22■■■■□ 3.07
TPM2-203ENST00000378292 DZIP1LQ8IYY4 767 aaKnown RBP34.22■■■■□ 3.07
TPM2-203ENST00000378292 DLG5Q8TDM6 1919 aa34.22■■■■□ 3.07
TPM2-203ENST00000378292 SULT6B1Q6IMI4 303 aa34.21■■■■□ 3.07
TPM2-203ENST00000378292 AEBP1Q8IUX7 1158 aa34.21■■■■□ 3.07
TPM2-203ENST00000378292 FTSJ3Q8IY81 847 aaKnown RBP34.21■■■■□ 3.07
TPM2-203ENST00000378292 ANP32AP39687 249 aaKnown RBP34.2■■■■□ 3.07
TPM2-203ENST00000378292 MVPQ14764 893 aaKnown RBP34.2■■■■□ 3.07
TPM2-203ENST00000378292 IFT57Q9NWB7 429 aa34.2■■■■□ 3.07
TPM2-203ENST00000378292 PIK3C2AO00443 1686 aa34.19■■■■□ 3.06
TPM2-203ENST00000378292 MAP3K19Q56UN5 1328 aa34.19■■■■□ 3.06
TPM2-203ENST00000378292 GNAI1P63096 354 aa34.19■■■■□ 3.06
TPM2-203ENST00000378292 TRIM27P14373 513 aa34.18■■■■□ 3.06
TPM2-203ENST00000378292 ANP32EQ9BTT0 268 aa34.18■■■■□ 3.06
TPM2-203ENST00000378292 ZNF853P0CG23 659 aa34.16■■■■□ 3.06
TPM2-203ENST00000378292 ALDH1L2Q3SY69 923 aa34.16■■■■□ 3.06
TPM2-203ENST00000378292 ATF7IPQ6VMQ6 1270 aa34.16■■■■□ 3.06
TPM2-203ENST00000378292 NOB1Q9ULX3 412 aaKnown RBP34.16■■■■□ 3.06
TPM2-203ENST00000378292 RGPD1P0DJD0 1748 aa34.15■■■■□ 3.06
TPM2-203ENST00000378292 PCDHB15Q9Y5E8 787 aa34.15■■■■□ 3.06
TPM2-203ENST00000378292 ZNF428Q96B54 188 aa34.15■■■■□ 3.06
TPM2-203ENST00000378292 KIF16BQ96L93 1317 aa34.15■■■■□ 3.06
TPM2-203ENST00000378292 SBNO1A3KN83 1393 aa34.14■■■■□ 3.06
TPM2-203ENST00000378292 FAM83GA6ND36 823 aa34.13■■■■□ 3.05
TPM2-203ENST00000378292 FLT4P35916 1363 aa34.13■■■■□ 3.05
TPM2-203ENST00000378292 RGS3P49796 1198 aa34.13■■■■□ 3.05
TPM2-203ENST00000378292 NLRP6P59044 892 aa34.13■■■■□ 3.05
TPM2-203ENST00000378292 MBIPQ9NS73 344 aa34.13■■■■□ 3.05
TPM2-203ENST00000378292 CFAP44Q96MT7 982 aa34.12■■■■□ 3.05
TPM2-203ENST00000378292 RBM33Q96EV2 1170 aaKnown RBP34.1■■■■□ 3.05
TPM2-203ENST00000378292 IPO8O15397 1037 aaKnown RBP34.1■■■■□ 3.05
TPM2-203ENST00000378292 VAMP4O75379 141 aa34.09■■■■□ 3.05
TPM2-203ENST00000378292 DCTN1Q14203 1278 aa34.09■■■■□ 3.05
TPM2-203ENST00000378292 NPHP4O75161 1426 aaPredicted RBP34.08■■■■□ 3.05
TPM2-203ENST00000378292 AMPHP49418 695 aa34.08■■■■□ 3.05
TPM2-203ENST00000378292 ARHGEF10O15013 1369 aa34.08■■■■□ 3.05
TPM2-203ENST00000378292 BRPF1P55201 1214 aaPredicted RBP34.07■■■■□ 3.04
TPM2-203ENST00000378292 TSPYL6Q8N831 410 aa34.07■■■■□ 3.04
TPM2-203ENST00000378292 IPO9Q96P70 1041 aaKnown RBP34.07■■■■□ 3.04
TPM2-203ENST00000378292 PHF8Q9UPP1 1060 aa34.07■■■■□ 3.04
TPM2-203ENST00000378292 NUTM2GQ5VZR2 741 aa34.06■■■■□ 3.04
TPM2-203ENST00000378292 ERICH6Q7L0X2 663 aa34.06■■■■□ 3.04
TPM2-203ENST00000378292 ITPRIPQ8IWB1 547 aa34.06■■■■□ 3.04
TPM2-203ENST00000378292 DDX19BQ9UMR2 479 aa34.06■■■■□ 3.04
TPM2-203ENST00000378292 NPM2Q86SE8 214 aaKnown RBP34.05■■■■□ 3.04
TPM2-203ENST00000378292 ABTB2Q8N961 1025 aa34.05■■■■□ 3.04
TPM2-203ENST00000378292 ADGRL3Q9HAR2 1447 aa34.05■■■■□ 3.04
TPM2-203ENST00000378292 MARF1Q9Y4F3 1742 aaKnown RBP34.05■■■■□ 3.04
TPM2-203ENST00000378292 PAK3O75914 559 aaPredicted RBP34.04■■■■□ 3.04
TPM2-203ENST00000378292 FAM161AQ3B820 660 aa34.03■■■■□ 3.04
TPM2-203ENST00000378292 RWDD1Q9H446 243 aaPredicted RBP34.03■■■■□ 3.04
TPM2-203ENST00000378292 USP54Q70EL1 1684 aa34.03■■■■□ 3.04
TPM2-203ENST00000378292 TMEM57Q8N5G2 664 aa34.02■■■■□ 3.04
TPM2-203ENST00000378292 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
TPM2-203ENST00000378292 ELL2O00472 640 aaPredicted RBP34.01■■■■□ 3.03
TPM2-203ENST00000378292 TWISTNBQ3B726 338 aaPredicted RBP34■■■■□ 3.03
TPM2-203ENST00000378292 C8orf34Q49A92 452 aa34■■■■□ 3.03
TPM2-203ENST00000378292 MRPL50Q8N5N7 158 aaKnown RBP33.99■■■■□ 3.03
TPM2-203ENST00000378292 C8orf58Q8NAV2 365 aa33.99■■■■□ 3.03
TPM2-203ENST00000378292 NOP58Q9Y2X3 529 aaKnown RBP33.99■■■■□ 3.03
TPM2-203ENST00000378292 KDRP35968 1356 aa33.99■■■■□ 3.03
TPM2-203ENST00000378292 KIF24Q5T7B8 1368 aa33.98■■■■□ 3.03
TPM2-203ENST00000378292 EYA1Q99502 592 aa33.98■■■■□ 3.03
TPM2-203ENST00000378292 IGSF1Q8N6C5 1336 aa33.98■■■■□ 3.03
TPM2-203ENST00000378292 MCM10Q7L590 875 aa33.97■■■■□ 3.03
TPM2-203ENST00000378292 C14orf37Q86TY3 774 aa33.96■■■■□ 3.03
TPM2-203ENST00000378292 HOXC9P31274 260 aa33.95■■■■□ 3.03
TPM2-203ENST00000378292 ESCO1Q5FWF5 840 aa33.95■■■■□ 3.03
TPM2-203ENST00000378292 ARHGAP45Q92619 1136 aa33.94■■■■□ 3.02
TPM2-203ENST00000378292 ZBTB40Q9NUA8 1239 aa33.92■■■■□ 3.02
TPM2-203ENST00000378292 CHL1O00533 1208 aa33.92■■■■□ 3.02
TPM2-203ENST00000378292 MTHFSDQ2M296 383 aaKnown RBP33.92■■■■□ 3.02
TPM2-203ENST00000378292 PSME1Q06323 249 aa33.9■■■■□ 3.02
TPM2-203ENST00000378292 PDZRN3Q9UPQ7 1066 aa33.9■■■■□ 3.02
TPM2-203ENST00000378292 FOXO3O43524 673 aa33.89■■■■□ 3.02
TPM2-203ENST00000378292 HDAC1Q13547 482 aaPredicted RBP33.89■■■■□ 3.02
TPM2-203ENST00000378292 ZBTB47Q9UFB7 747 aaPredicted RBP33.89■■■■□ 3.02
TPM2-203ENST00000378292 NWD1Q149M9 1564 aa33.88■■■■□ 3.01
TPM2-203ENST00000378292 CRB1P82279 1406 aa33.87■■■■□ 3.01
TPM2-203ENST00000378292 RTF1Q92541 710 aaKnown RBP33.85■■■■□ 3.01
TPM2-203ENST00000378292 GAS2L2Q8NHY3 880 aa33.85■■■■□ 3.01
TPM2-203ENST00000378292 RTL1A6NKG5 1358 aa33.84■■■■□ 3.01
TPM2-203ENST00000378292 KIAA0232Q92628 1395 aa33.83■■■■□ 3.01
TPM2-203ENST00000378292 HAP1P54257 671 aaPredicted RBP33.82■■■■□ 3
TPM2-203ENST00000378292 KRT24Q2M2I5 525 aa33.82■■■■□ 3
TPM2-203ENST00000378292 LTN1O94822 1766 aa33.82■■■■□ 3
TPM2-203ENST00000378292 LTV1Q96GA3 475 aaPredicted RBP33.82■■■■□ 3
TPM2-203ENST00000378292 ORAI2Q96SN7 254 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms