RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 SPATA31A1Q5TZJ5 1347 aa31.88■■■□□ 2.69
RPP38-201ENST00000378197 ONECUT3O60422 494 aaPredicted RBP31.88■■■□□ 2.69
RPP38-201ENST00000378197 FAM98CQ17RN3 349 aaKnown RBP31.88■■■□□ 2.69
RPP38-201ENST00000378197 LTN1O94822 1766 aa31.88■■■□□ 2.69
RPP38-201ENST00000378197 KIF7Q2M1P5 1343 aa31.87■■■□□ 2.69
RPP38-201ENST00000378197 SEPT12Q8IYM1 358 aa31.87■■■□□ 2.69
RPP38-201ENST00000378197 ABCC6O95255 1503 aa31.86■■■□□ 2.69
RPP38-201ENST00000378197 RGPD5Q99666 1765 aa31.85■■■□□ 2.69
RPP38-201ENST00000378197 USP35Q9P2H5 1018 aa31.84■■■□□ 2.69
RPP38-201ENST00000378197 PANK3Q9H999 370 aa31.84■■■□□ 2.69
RPP38-201ENST00000378197 A0A0G2JS52 829 aa31.83■■■□□ 2.69
RPP38-201ENST00000378197 MYT1Q01538 1121 aa31.83■■■□□ 2.69
RPP38-201ENST00000378197 BRWD3Q6RI45 1802 aa31.82■■■□□ 2.68
RPP38-201ENST00000378197 CRB1P82279 1406 aa31.81■■■□□ 2.68
RPP38-201ENST00000378197 CGNL1Q0VF96 1302 aa31.8■■■□□ 2.68
RPP38-201ENST00000378197 WDR17Q8IZU2 1322 aa31.8■■■□□ 2.68
RPP38-201ENST00000378197 FBLN1P23142 703 aa31.79■■■□□ 2.68
RPP38-201ENST00000378197 THSD7AQ9UPZ6 1657 aa31.79■■■□□ 2.68
RPP38-201ENST00000378197 TOM1L2Q6ZVM7 507 aa31.78■■■□□ 2.68
RPP38-201ENST00000378197 TCP11L2Q8N4U5 519 aa31.78■■■□□ 2.68
RPP38-201ENST00000378197 MAP3K19Q56UN5 1328 aa31.77■■■□□ 2.68
RPP38-201ENST00000378197 CSB-PGBD3P0DP91 1061 aa31.76■■■□□ 2.67
RPP38-201ENST00000378197 BARGINQ6ZT62 677 aa31.76■■■□□ 2.67
RPP38-201ENST00000378197 UPF1Q92900 1129 aaKnown RBP eCLIP31.76■■■□□ 2.67
RPP38-201ENST00000378197 CCDC7Q96M83 1385 aa31.74■■■□□ 2.67
RPP38-201ENST00000378197 THRAP3Q9Y2W1 955 aaKnown RBP31.74■■■□□ 2.67
RPP38-201ENST00000378197 KRT27Q7Z3Y8 459 aa31.73■■■□□ 2.67
RPP38-201ENST00000378197 IP6K1Q92551 441 aa31.73■■■□□ 2.67
RPP38-201ENST00000378197 BLMP54132 1417 aaPredicted RBP31.73■■■□□ 2.67
RPP38-201ENST00000378197 WASHC2AQ641Q2 1341 aa31.72■■■□□ 2.67
RPP38-201ENST00000378197 RRS1Q15050 365 aaKnown RBP31.72■■■□□ 2.67
RPP38-201ENST00000378197 ERBB3P21860 1342 aa31.72■■■□□ 2.67
RPP38-201ENST00000378197 AMPHP49418 695 aa31.71■■■□□ 2.67
RPP38-201ENST00000378197 ANKRD24Q8TF21 1146 aa31.7■■■□□ 2.66
RPP38-201ENST00000378197 ANKRD26Q9UPS8 1709 aa31.69■■■□□ 2.66
RPP38-201ENST00000378197 HOXC9P31274 260 aa31.69■■■□□ 2.66
RPP38-201ENST00000378197 CARD10Q9BWT7 1032 aa31.69■■■□□ 2.66
RPP38-201ENST00000378197 RTL1A6NKG5 1358 aa31.67■■■□□ 2.66
RPP38-201ENST00000378197 KNSTRNQ9Y448 316 aa31.65■■■□□ 2.66
RPP38-201ENST00000378197 EP400Q96L91 3159 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 WNK3Q9BYP7 1800 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 LTV1Q96GA3 475 aaPredicted RBP31.64■■■□□ 2.66
RPP38-201ENST00000378197 NLRP2Q9NX02 1062 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 NSD2O96028 1365 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 PARP4Q9UKK3 1724 aaKnown RBP31.63■■■□□ 2.65
RPP38-201ENST00000378197 PEAK1Q9H792 1746 aa31.63■■■□□ 2.65
RPP38-201ENST00000378197 FAM182BQ5T319 152 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 EMILIN1Q9Y6C2 1016 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 FLT4P35916 1363 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 KIF24Q5T7B8 1368 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 FAM208AQ9UK61 1670 aaKnown RBP31.6■■■□□ 2.65
RPP38-201ENST00000378197 TNNT2P45379 298 aaPredicted RBP31.59■■■□□ 2.65
RPP38-201ENST00000378197 PDE3BQ13370 1112 aa31.59■■■□□ 2.65
RPP38-201ENST00000378197 DISP2A7MBM2 1401 aa31.58■■■□□ 2.65
RPP38-201ENST00000378197 LRRC37A3O60309 1634 aa31.58■■■□□ 2.65
RPP38-201ENST00000378197 CDCA7Q9BWT1 371 aaPredicted RBP31.58■■■□□ 2.65
RPP38-201ENST00000378197 PER1O15534 1290 aaPredicted RBP31.57■■■□□ 2.64
RPP38-201ENST00000378197 AMER1Q5JTC6 1135 aaPredicted RBP31.57■■■□□ 2.64
RPP38-201ENST00000378197 MAP2P11137 1827 aaKnown RBP31.57■■■□□ 2.64
RPP38-201ENST00000378197 HSP90AB2PQ58FF8 381 aa31.56■■■□□ 2.64
RPP38-201ENST00000378197 INSRP06213 1382 aa31.56■■■□□ 2.64
RPP38-201ENST00000378197 PPM1GO15355 546 aaPredicted RBP31.54■■■□□ 2.64
RPP38-201ENST00000378197 DDB1Q16531 1140 aa31.54■■■□□ 2.64
RPP38-201ENST00000378197 MORC1Q86VD1 984 aa31.54■■■□□ 2.64
RPP38-201ENST00000378197 POLKQ9UBT6 870 aa31.54■■■□□ 2.64
RPP38-201ENST00000378197 CCDC125Q86Z20 511 aa31.53■■■□□ 2.64
RPP38-201ENST00000378197 SMG6Q86US8 1419 aaKnown RBP31.53■■■□□ 2.64
RPP38-201ENST00000378197 RGPD2P0DJD1 1756 aa31.52■■■□□ 2.64
RPP38-201ENST00000378197 ZEB1P37275 1124 aaPredicted RBP31.51■■■□□ 2.63
RPP38-201ENST00000378197 IL2RBP14784 551 aa31.49■■■□□ 2.63
RPP38-201ENST00000378197 FAM196AQ6ZSG2 479 aa31.49■■■□□ 2.63
RPP38-201ENST00000378197 EXOC5O00471 708 aa31.46■■■□□ 2.63
RPP38-201ENST00000378197 NBPF6Q5VWK0 638 aa31.46■■■□□ 2.63
RPP38-201ENST00000378197 NBPF4Q96M43 638 aa31.46■■■□□ 2.63
RPP38-201ENST00000378197 CC2D1BQ5T0F9 858 aaKnown RBP31.46■■■□□ 2.63
RPP38-201ENST00000378197 TNS2Q63HR2 1409 aa31.45■■■□□ 2.63
RPP38-201ENST00000378197 SF3B2Q13435 895 aaKnown RBP31.45■■■□□ 2.62
RPP38-201ENST00000378197 OVOS2A0A0G2JMS6 1433 aa31.43■■■□□ 2.62
RPP38-201ENST00000378197 USHBP1Q8N6Y0 703 aa31.43■■■□□ 2.62
RPP38-201ENST00000378197 RGPD1P0DJD0 1748 aa31.42■■■□□ 2.62
RPP38-201ENST00000378197 MARCH10Q8NA82 808 aaPredicted RBP31.42■■■□□ 2.62
RPP38-201ENST00000378197 NPC1L1Q9UHC9 1359 aa31.42■■■□□ 2.62
RPP38-201ENST00000378197 TRIM37O94972 964 aa31.39■■■□□ 2.62
RPP38-201ENST00000378197 CNGB1Q14028 1251 aaPredicted RBP31.39■■■□□ 2.62
RPP38-201ENST00000378197 DEFB132Q7Z7B7 95 aa31.38■■■□□ 2.61
RPP38-201ENST00000378197 TNS1Q9HBL0 1735 aaKnown RBP31.38■■■□□ 2.61
RPP38-201ENST00000378197 MEGF6O75095 1541 aa31.37■■■□□ 2.61
RPP38-201ENST00000378197 EIF4A2Q14240 407 aaKnown RBP31.36■■■□□ 2.61
RPP38-201ENST00000378197 BAG6P46379 1132 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 RAPGEF4Q8WZA2 1011 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 EYA1Q99502 592 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 BCL9O00512 1426 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 NCAPD2Q15021 1401 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 SBF2Q86WG5 1849 aa31.32■■■□□ 2.6
RPP38-201ENST00000378197 TATP17735 454 aaPredicted RBP31.3■■■□□ 2.6
RPP38-201ENST00000378197 MTHFSP49914 203 aa31.29■■■□□ 2.6
RPP38-201ENST00000378197 ZCRB1Q8TBF4 217 aaKnown RBP31.29■■■□□ 2.6
RPP38-201ENST00000378197 DDX54Q8TDD1 881 aaKnown RBP31.28■■■□□ 2.6
RPP38-201ENST00000378197 SHANK3Q9BYB0 1731 aa31.27■■■□□ 2.6
RPP38-201ENST00000378197 APBA3O96018 575 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 252.9 ms