RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.15
NPHP4-203ENST00000378169 CNTROBQ8N137 903 aa16.02■□□□□ 0.15
NPHP4-203ENST00000378169 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.15
NPHP4-203ENST00000378169 ZNF518AQ6AHZ1 1483 aa16.01■□□□□ 0.15
NPHP4-203ENST00000378169 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
NPHP4-203ENST00000378169 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-203ENST00000378169 PHF14O94880 888 aa16.01■□□□□ 0.15
NPHP4-203ENST00000378169 NCKAP5LQ9HCH0 1330 aa16.01■□□□□ 0.15
NPHP4-203ENST00000378169 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
NPHP4-203ENST00000378169 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
NPHP4-203ENST00000378169 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
NPHP4-203ENST00000378169 PBRM1Q86U86 1689 aa16■□□□□ 0.15
NPHP4-203ENST00000378169 ABCC11Q96J66 1382 aa16■□□□□ 0.15
NPHP4-203ENST00000378169 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
NPHP4-203ENST00000378169 PLEKHH1Q9ULM0 1364 aa16■□□□□ 0.15
NPHP4-203ENST00000378169 WASHC4Q2M389 1173 aa16■□□□□ 0.15
NPHP4-203ENST00000378169 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
NPHP4-203ENST00000378169 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
NPHP4-203ENST00000378169 TRAK2O60296 914 aa15.99■□□□□ 0.15
NPHP4-203ENST00000378169 CABP4P57796 275 aa15.99■□□□□ 0.15
NPHP4-203ENST00000378169 ALDH1L2Q3SY69 923 aa15.99■□□□□ 0.15
NPHP4-203ENST00000378169 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
NPHP4-203ENST00000378169 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
NPHP4-203ENST00000378169 PCDHB15Q9Y5E8 787 aa15.98■□□□□ 0.15
NPHP4-203ENST00000378169 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
NPHP4-203ENST00000378169 CPLX1O14810 134 aa15.98■□□□□ 0.15
NPHP4-203ENST00000378169 LRRFIP1Q32MZ4 808 aaKnown RBP15.98■□□□□ 0.15
NPHP4-203ENST00000378169 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
NPHP4-203ENST00000378169 KDM6BO15054 1643 aa15.97■□□□□ 0.15
NPHP4-203ENST00000378169 RABEP1Q15276 862 aa15.97■□□□□ 0.15
NPHP4-203ENST00000378169 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
NPHP4-203ENST00000378169 NSD2O96028 1365 aa15.97■□□□□ 0.15
NPHP4-203ENST00000378169 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 G3V3G9 751 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 VPS37DQ86XT2 251 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 CREBRFQ8IUR6 639 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 TMX4Q9H1E5 349 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-203ENST00000378169 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
NPHP4-203ENST00000378169 ABCC2Q92887 1545 aa15.96■□□□□ 0.14
NPHP4-203ENST00000378169 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 PTCD1O75127 700 aaKnown RBP15.95■□□□□ 0.14
NPHP4-203ENST00000378169 TRDNQ13061 729 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 TAF7Q15545 349 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-203ENST00000378169 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 BICD2Q8TD16 824 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 RNF214Q8ND24 703 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 ADGRL2O95490 1459 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 ABCC10Q5T3U5 1492 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 CEP170Q5SW79 1584 aa15.95■□□□□ 0.14
NPHP4-203ENST00000378169 CPLX2Q6PUV4 134 aaKnown RBP15.94■□□□□ 0.14
NPHP4-203ENST00000378169 ARHGEF12Q9NZN5 1544 aa15.94■□□□□ 0.14
NPHP4-203ENST00000378169 RLBP1P12271 317 aa15.94■□□□□ 0.14
NPHP4-203ENST00000378169 CCDC85AQ96PX6 553 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-203ENST00000378169 TNRQ92752 1358 aa15.94■□□□□ 0.14
NPHP4-203ENST00000378169 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
NPHP4-203ENST00000378169 ANXA1P04083 346 aa15.93■□□□□ 0.14
NPHP4-203ENST00000378169 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
NPHP4-203ENST00000378169 PRPF40AO75400 957 aaKnown RBP15.93■□□□□ 0.14
NPHP4-203ENST00000378169 AACSQ86V21 672 aa15.92■□□□□ 0.14
NPHP4-203ENST00000378169 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
NPHP4-203ENST00000378169 TTC21BQ7Z4L5 1316 aa15.92■□□□□ 0.14
NPHP4-203ENST00000378169 K7ELQ4 463 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-203ENST00000378169 SYNE3Q6ZMZ3 975 aa15.92■□□□□ 0.14
NPHP4-203ENST00000378169 UHRF1BP1Q6BDS2 1440 aa15.92■□□□□ 0.14
NPHP4-203ENST00000378169 CWC27Q6UX04 472 aaKnown RBP15.92■□□□□ 0.14
NPHP4-203ENST00000378169 BECN2A8MW95 431 aa15.92■□□□□ 0.14
NPHP4-203ENST00000378169 RALYLQ86SE5 291 aaKnown RBP15.91■□□□□ 0.14
NPHP4-203ENST00000378169 AKAP17AQ02040 695 aaKnown RBP15.91■□□□□ 0.14
NPHP4-203ENST00000378169 FLIIQ13045 1269 aa15.91■□□□□ 0.14
NPHP4-203ENST00000378169 UPF3BQ9BZI7 483 aaKnown RBP15.91■□□□□ 0.14
NPHP4-203ENST00000378169 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
NPHP4-203ENST00000378169 KDM4AO75164 1064 aa15.91■□□□□ 0.14
NPHP4-203ENST00000378169 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-203ENST00000378169 UHRF1BP1LA0JNW5 1464 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 KRT24Q2M2I5 525 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 ERC1Q8IUD2 1116 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 FBXW7Q969H0 707 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
NPHP4-203ENST00000378169 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-203ENST00000378169 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-203ENST00000378169 NFXL1Q6ZNB6 911 aa15.9■□□□□ 0.14
NPHP4-203ENST00000378169 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-203ENST00000378169 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-203ENST00000378169 GOLGA6L19H0YKK7 550 aa15.89■□□□□ 0.14
NPHP4-203ENST00000378169 TSPYL6Q8N831 410 aa15.89■□□□□ 0.14
NPHP4-203ENST00000378169 CCDC34Q96HJ3 373 aa15.89■□□□□ 0.14
NPHP4-203ENST00000378169 CFAP65Q6ZU64 1925 aaKnown RBP15.89■□□□□ 0.13
NPHP4-203ENST00000378169 RIMS2Q9UQ26 1411 aa15.89■□□□□ 0.13
NPHP4-203ENST00000378169 FIBPO43427 364 aa15.89■□□□□ 0.13
NPHP4-203ENST00000378169 TPM4P67936 248 aa15.89■□□□□ 0.13
NPHP4-203ENST00000378169 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
NPHP4-203ENST00000378169 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
NPHP4-203ENST00000378169 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
NPHP4-203ENST00000378169 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms