RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 MYT1Q01538 1121 aa37.31■■■■□ 3.56
COMMD3-201ENST00000376836 LARP1Q6PKG0 1096 aaKnown RBP37.3■■■■□ 3.56
COMMD3-201ENST00000376836 COL5A2P05997 1499 aaPredicted RBP37.29■■■■□ 3.56
COMMD3-201ENST00000376836 SPATA31A1Q5TZJ5 1347 aa37.29■■■■□ 3.56
COMMD3-201ENST00000376836 FAM98CQ17RN3 349 aaKnown RBP37.29■■■■□ 3.56
COMMD3-201ENST00000376836 AXIN2Q9Y2T1 843 aa37.29■■■■□ 3.56
COMMD3-201ENST00000376836 USP35Q9P2H5 1018 aa37.28■■■■□ 3.56
COMMD3-201ENST00000376836 CSB-PGBD3P0DP91 1061 aa37.27■■■■□ 3.56
COMMD3-201ENST00000376836 SEPT12Q8IYM1 358 aa37.27■■■■□ 3.56
COMMD3-201ENST00000376836 KIF20BQ96Q89 1820 aa37.26■■■■□ 3.56
COMMD3-201ENST00000376836 CCDC7Q96M83 1385 aa37.26■■■■□ 3.56
COMMD3-201ENST00000376836 ONECUT3O60422 494 aaPredicted RBP37.26■■■■□ 3.56
COMMD3-201ENST00000376836 KNSTRNQ9Y448 316 aa37.26■■■■□ 3.56
COMMD3-201ENST00000376836 TOM1L2Q6ZVM7 507 aa37.25■■■■□ 3.55
COMMD3-201ENST00000376836 ABCC6O95255 1503 aa37.25■■■■□ 3.55
COMMD3-201ENST00000376836 AMPHP49418 695 aa37.23■■■■□ 3.55
COMMD3-201ENST00000376836 COL18A1P39060 1754 aa37.23■■■■□ 3.55
COMMD3-201ENST00000376836 WASHC2AQ641Q2 1341 aa37.22■■■■□ 3.55
COMMD3-201ENST00000376836 THRAP3Q9Y2W1 955 aaKnown RBP37.22■■■■□ 3.55
COMMD3-201ENST00000376836 CRB1P82279 1406 aa37.22■■■■□ 3.55
COMMD3-201ENST00000376836 WDR17Q8IZU2 1322 aa37.21■■■■□ 3.55
COMMD3-201ENST00000376836 TCP11L2Q8N4U5 519 aa37.21■■■■□ 3.55
COMMD3-201ENST00000376836 IP6K1Q92551 441 aa37.2■■■■□ 3.55
COMMD3-201ENST00000376836 MAP3K19Q56UN5 1328 aa37.19■■■■□ 3.54
COMMD3-201ENST00000376836 LTN1O94822 1766 aa37.18■■■■□ 3.54
COMMD3-201ENST00000376836 FBLN1P23142 703 aa37.17■■■■□ 3.54
COMMD3-201ENST00000376836 BARGINQ6ZT62 677 aa37.17■■■■□ 3.54
COMMD3-201ENST00000376836 RRS1Q15050 365 aaKnown RBP37.16■■■■□ 3.54
COMMD3-201ENST00000376836 NSD2O96028 1365 aa37.15■■■■□ 3.54
COMMD3-201ENST00000376836 BLMP54132 1417 aaPredicted RBP37.15■■■■□ 3.54
COMMD3-201ENST00000376836 ANKRD24Q8TF21 1146 aa37.14■■■■□ 3.54
COMMD3-201ENST00000376836 HOXC9P31274 260 aa37.12■■■■□ 3.53
COMMD3-201ENST00000376836 KRT27Q7Z3Y8 459 aa37.12■■■■□ 3.53
COMMD3-201ENST00000376836 CARD10Q9BWT7 1032 aa37.12■■■■□ 3.53
COMMD3-201ENST00000376836 ERBB3P21860 1342 aa37.12■■■■□ 3.53
COMMD3-201ENST00000376836 RTL1A6NKG5 1358 aa37.11■■■■□ 3.53
COMMD3-201ENST00000376836 NLRP2Q9NX02 1062 aa37.1■■■■□ 3.53
COMMD3-201ENST00000376836 RGPD5Q99666 1765 aa37.1■■■■□ 3.53
COMMD3-201ENST00000376836 MORC1Q86VD1 984 aa37.09■■■■□ 3.53
COMMD3-201ENST00000376836 LTV1Q96GA3 475 aaPredicted RBP37.09■■■■□ 3.53
COMMD3-201ENST00000376836 TNNT2P45379 298 aaPredicted RBP37.07■■■■□ 3.52
COMMD3-201ENST00000376836 KIF24Q5T7B8 1368 aa37.07■■■■□ 3.52
COMMD3-201ENST00000376836 CDCA7Q9BWT1 371 aaPredicted RBP37.06■■■■□ 3.52
COMMD3-201ENST00000376836 PPM1GO15355 546 aaPredicted RBP37.05■■■■□ 3.52
COMMD3-201ENST00000376836 FLT4P35916 1363 aa37.04■■■■□ 3.52
COMMD3-201ENST00000376836 PDE3BQ13370 1112 aa37.04■■■■□ 3.52
COMMD3-201ENST00000376836 UPF1Q92900 1129 aaKnown RBP eCLIP37.04■■■■□ 3.52
COMMD3-201ENST00000376836 THSD7AQ9UPZ6 1657 aa37.03■■■■□ 3.52
COMMD3-201ENST00000376836 SMG6Q86US8 1419 aaKnown RBP37.02■■■■□ 3.52
COMMD3-201ENST00000376836 PER1O15534 1290 aaPredicted RBP37.02■■■■□ 3.52
COMMD3-201ENST00000376836 EMILIN1Q9Y6C2 1016 aa37.02■■■■□ 3.52
COMMD3-201ENST00000376836 ANKRD26Q9UPS8 1709 aa37.01■■■■□ 3.52
COMMD3-201ENST00000376836 AMER1Q5JTC6 1135 aaPredicted RBP37.01■■■■□ 3.52
COMMD3-201ENST00000376836 BRWD3Q6RI45 1802 aa36.99■■■■□ 3.51
COMMD3-201ENST00000376836 INSRP06213 1382 aa36.98■■■■□ 3.51
COMMD3-201ENST00000376836 HSP90AB2PQ58FF8 381 aa36.97■■■■□ 3.51
COMMD3-201ENST00000376836 POLKQ9UBT6 870 aa36.97■■■■□ 3.51
COMMD3-201ENST00000376836 DDB1Q16531 1140 aa36.96■■■■□ 3.51
COMMD3-201ENST00000376836 CC2D1BQ5T0F9 858 aaKnown RBP36.95■■■■□ 3.51
COMMD3-201ENST00000376836 CCDC125Q86Z20 511 aa36.93■■■■□ 3.5
COMMD3-201ENST00000376836 IL2RBP14784 551 aa36.91■■■■□ 3.5
COMMD3-201ENST00000376836 FAM208AQ9UK61 1670 aaKnown RBP36.91■■■■□ 3.5
COMMD3-201ENST00000376836 EXOC5O00471 708 aa36.9■■■■□ 3.5
COMMD3-201ENST00000376836 NPC1L1Q9UHC9 1359 aa36.89■■■■□ 3.5
COMMD3-201ENST00000376836 PEAK1Q9H792 1746 aa36.88■■■■□ 3.5
COMMD3-201ENST00000376836 CNGB1Q14028 1251 aaPredicted RBP36.88■■■■□ 3.49
COMMD3-201ENST00000376836 FAM182BQ5T319 152 aa36.88■■■■□ 3.49
COMMD3-201ENST00000376836 FAM196AQ6ZSG2 479 aa36.88■■■■□ 3.49
COMMD3-201ENST00000376836 MAP2P11137 1827 aaKnown RBP36.88■■■■□ 3.49
COMMD3-201ENST00000376836 PARP4Q9UKK3 1724 aaKnown RBP36.88■■■■□ 3.49
COMMD3-201ENST00000376836 SF3B2Q13435 895 aaKnown RBP36.87■■■■□ 3.49
COMMD3-201ENST00000376836 DISP2A7MBM2 1401 aa36.86■■■■□ 3.49
COMMD3-201ENST00000376836 NBPF6Q5VWK0 638 aa36.85■■■■□ 3.49
COMMD3-201ENST00000376836 NBPF4Q96M43 638 aa36.85■■■■□ 3.49
COMMD3-201ENST00000376836 WNK3Q9BYP7 1800 aa36.82■■■■□ 3.48
COMMD3-201ENST00000376836 LRRC37A3O60309 1634 aa36.79■■■■□ 3.48
COMMD3-201ENST00000376836 USHBP1Q8N6Y0 703 aa36.79■■■■□ 3.48
COMMD3-201ENST00000376836 RAPGEF4Q8WZA2 1011 aa36.79■■■■□ 3.48
COMMD3-201ENST00000376836 OVOS2A0A0G2JMS6 1433 aa36.75■■■■□ 3.47
COMMD3-201ENST00000376836 TNS2Q63HR2 1409 aa36.75■■■■□ 3.47
COMMD3-201ENST00000376836 EIF4A2Q14240 407 aaKnown RBP36.75■■■■□ 3.47
COMMD3-201ENST00000376836 TATP17735 454 aaPredicted RBP36.74■■■■□ 3.47
COMMD3-201ENST00000376836 MARCH10Q8NA82 808 aaPredicted RBP36.74■■■■□ 3.47
COMMD3-201ENST00000376836 MTHFSP49914 203 aa36.73■■■■□ 3.47
COMMD3-201ENST00000376836 RGPD2P0DJD1 1756 aa36.72■■■■□ 3.47
COMMD3-201ENST00000376836 DDX10Q13206 875 aaKnown RBP36.71■■■■□ 3.47
COMMD3-201ENST00000376836 EYA1Q99502 592 aa36.71■■■■□ 3.47
COMMD3-201ENST00000376836 EP400Q96L91 3159 aa36.7■■■■□ 3.47
COMMD3-201ENST00000376836 TRIM37O94972 964 aa36.7■■■■□ 3.47
COMMD3-201ENST00000376836 ZCRB1Q8TBF4 217 aaKnown RBP36.69■■■■□ 3.46
COMMD3-201ENST00000376836 BAG6P46379 1132 aa36.68■■■■□ 3.46
COMMD3-201ENST00000376836 DDX54Q8TDD1 881 aaKnown RBP36.67■■■■□ 3.46
COMMD3-201ENST00000376836 MEGF6O75095 1541 aa36.64■■■■□ 3.46
COMMD3-201ENST00000376836 RGPD1P0DJD0 1748 aa36.63■■■■□ 3.45
COMMD3-201ENST00000376836 BCL9O00512 1426 aa36.62■■■■□ 3.45
COMMD3-201ENST00000376836 APBA3O96018 575 aa36.6■■■■□ 3.45
COMMD3-201ENST00000376836 DEFB132Q7Z7B7 95 aa36.59■■■■□ 3.45
COMMD3-201ENST00000376836 IGSF1Q8N6C5 1336 aa36.59■■■■□ 3.45
COMMD3-201ENST00000376836 NCAPD2Q15021 1401 aa36.59■■■■□ 3.45
COMMD3-201ENST00000376836 DIAPH1O60610 1272 aaKnown RBP36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms