RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-203ENST00000376619 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-203ENST00000376619 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-203ENST00000376619 BCORL1Q5H9F3 1711 aa13.74□□□□□ -0.21
HDAC6-203ENST00000376619 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
HDAC6-203ENST00000376619 PTPRMP28827 1452 aa13.74□□□□□ -0.21
HDAC6-203ENST00000376619 NPHP1O15259 732 aa13.73□□□□□ -0.21
HDAC6-203ENST00000376619 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
HDAC6-203ENST00000376619 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
HDAC6-203ENST00000376619 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-203ENST00000376619 ATF3P18847 181 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
HDAC6-203ENST00000376619 FOSBP53539 338 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 MPNDQ8N594 471 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 RAPGEF4Q8WZA2 1011 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 DDX49Q9Y6V7 483 aaKnown RBP13.72□□□□□ -0.21
HDAC6-203ENST00000376619 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 EIF4A2Q14240 407 aaKnown RBP13.72□□□□□ -0.21
HDAC6-203ENST00000376619 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
HDAC6-203ENST00000376619 EVA1CP58658 441 aa13.71□□□□□ -0.21
HDAC6-203ENST00000376619 MEIS3Q99687 375 aa13.71□□□□□ -0.21
HDAC6-203ENST00000376619 MCCP23508 829 aa13.71□□□□□ -0.22
HDAC6-203ENST00000376619 LTKP29376 864 aa13.71□□□□□ -0.22
HDAC6-203ENST00000376619 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.22
HDAC6-203ENST00000376619 DIP2CQ9Y2E4 1556 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 KCNA6P17658 529 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
HDAC6-203ENST00000376619 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 KDM4AO75164 1064 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 NEK4P51957 841 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 GORABQ5T7V8 394 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
HDAC6-203ENST00000376619 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
HDAC6-203ENST00000376619 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
HDAC6-203ENST00000376619 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
HDAC6-203ENST00000376619 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
HDAC6-203ENST00000376619 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
HDAC6-203ENST00000376619 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
HDAC6-203ENST00000376619 ABCA6Q8N139 1617 aa13.68□□□□□ -0.22
HDAC6-203ENST00000376619 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
HDAC6-203ENST00000376619 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
HDAC6-203ENST00000376619 KDM5CP41229 1560 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 PTPRTO14522 1441 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-203ENST00000376619 RNF123Q5XPI4 1314 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 TAF7LQ5H9L4 462 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 G2E3Q7L622 706 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-203ENST00000376619 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 ST18O60284 1047 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 MTHFSDQ2M296 383 aaKnown RBP13.67□□□□□ -0.22
HDAC6-203ENST00000376619 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
HDAC6-203ENST00000376619 VAMP4O75379 141 aa13.66□□□□□ -0.22
HDAC6-203ENST00000376619 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
HDAC6-203ENST00000376619 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
HDAC6-203ENST00000376619 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
HDAC6-203ENST00000376619 RIMS1Q86UR5 1692 aaKnown RBP13.66□□□□□ -0.22
HDAC6-203ENST00000376619 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
HDAC6-203ENST00000376619 SLC39A6Q13433 755 aa13.66□□□□□ -0.22
HDAC6-203ENST00000376619 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-203ENST00000376619 CHMP5Q9NZZ3 219 aa13.66□□□□□ -0.22
HDAC6-203ENST00000376619 CDC45O75419 566 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
HDAC6-203ENST00000376619 RIMS2Q9UQ26 1411 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 GNAI2P04899 355 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-203ENST00000376619 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
HDAC6-203ENST00000376619 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
HDAC6-203ENST00000376619 MAST1Q9Y2H9 1570 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
HDAC6-203ENST00000376619 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 EYA1Q99502 592 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
HDAC6-203ENST00000376619 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
HDAC6-203ENST00000376619 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
HDAC6-203ENST00000376619 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
HDAC6-203ENST00000376619 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
HDAC6-203ENST00000376619 RICTORQ6R327 1708 aa13.63□□□□□ -0.23
HDAC6-203ENST00000376619 TRAK2O60296 914 aa13.62□□□□□ -0.23
HDAC6-203ENST00000376619 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
HDAC6-203ENST00000376619 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-203ENST00000376619 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
HDAC6-203ENST00000376619 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
HDAC6-203ENST00000376619 REC8O95072 547 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 ERVK-7P63135 1459 aa13.61□□□□□ -0.23
HDAC6-203ENST00000376619 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms