RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 MCM5P33992 734 aa22.15■■□□□ 1.14
TUBGCP3-202ENST00000375669 ZSCAN23Q3MJ62 389 aa22.15■■□□□ 1.14
TUBGCP3-202ENST00000375669 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
TUBGCP3-202ENST00000375669 KIF1BO60333 1816 aa22.14■■□□□ 1.14
TUBGCP3-202ENST00000375669 DEPDC5O75140 1603 aa22.14■■□□□ 1.13
TUBGCP3-202ENST00000375669 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.13
TUBGCP3-202ENST00000375669 CAVIN1Q6NZI2 390 aaKnown RBP22.14■■□□□ 1.13
TUBGCP3-202ENST00000375669 AK9Q5TCS8 1911 aa22.14■■□□□ 1.13
TUBGCP3-202ENST00000375669 DMTNQ08495 405 aa22.14■■□□□ 1.13
TUBGCP3-202ENST00000375669 GSPT1P15170 499 aaKnown RBP22.13■■□□□ 1.13
TUBGCP3-202ENST00000375669 CCDC94Q9BW85 323 aaPredicted RBP22.13■■□□□ 1.13
TUBGCP3-202ENST00000375669 OTUD7AQ8TE49 926 aaPredicted RBP22.13■■□□□ 1.13
TUBGCP3-202ENST00000375669 NRXN1Q9ULB1 1477 aa22.12■■□□□ 1.13
TUBGCP3-202ENST00000375669 FGD1P98174 961 aa22.12■■□□□ 1.13
TUBGCP3-202ENST00000375669 MROH1Q8NDA8 1641 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 NPATQ14207 1427 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 ADGRB1O14514 1584 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 DCTN1Q14203 1278 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
TUBGCP3-202ENST00000375669 VAMP4O75379 141 aa22.1■■□□□ 1.13
TUBGCP3-202ENST00000375669 PRAM1Q96QH2 718 aa22.1■■□□□ 1.13
TUBGCP3-202ENST00000375669 PPRC1Q5VV67 1664 aaKnown RBP22.1■■□□□ 1.13
TUBGCP3-202ENST00000375669 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
TUBGCP3-202ENST00000375669 RBM27Q9P2N5 1060 aaKnown RBP22.1■■□□□ 1.13
TUBGCP3-202ENST00000375669 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
TUBGCP3-202ENST00000375669 ZGPATQ8N5A5 531 aaKnown RBP22.09■■□□□ 1.13
TUBGCP3-202ENST00000375669 EFCAB6Q5THR3 1501 aa22.09■■□□□ 1.13
TUBGCP3-202ENST00000375669 LMBRD1Q9NUN5 540 aa22.08■■□□□ 1.13
TUBGCP3-202ENST00000375669 CCDC39Q9UFE4 941 aa22.08■■□□□ 1.13
TUBGCP3-202ENST00000375669 ZSCAN20P17040 1043 aaPredicted RBP22.08■■□□□ 1.13
TUBGCP3-202ENST00000375669 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.13
TUBGCP3-202ENST00000375669 SMARCA5O60264 1052 aaPredicted RBP22.08■■□□□ 1.12
TUBGCP3-202ENST00000375669 ADGRB2O60241 1585 aa22.07■■□□□ 1.12
TUBGCP3-202ENST00000375669 MYO3AQ8NEV4 1616 aa22.07■■□□□ 1.12
TUBGCP3-202ENST00000375669 C8orf58Q8NAV2 365 aa22.07■■□□□ 1.12
TUBGCP3-202ENST00000375669 GCC1Q96CN9 775 aa22.06■■□□□ 1.12
TUBGCP3-202ENST00000375669 KRT24Q2M2I5 525 aa22.06■■□□□ 1.12
TUBGCP3-202ENST00000375669 ALDH1L2Q3SY69 923 aa22.06■■□□□ 1.12
TUBGCP3-202ENST00000375669 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
TUBGCP3-202ENST00000375669 PRPF40AO75400 957 aaKnown RBP22.05■■□□□ 1.12
TUBGCP3-202ENST00000375669 VGFO15240 615 aaPredicted RBP22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 CDC45O75419 566 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 NUCB2P80303 420 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 TPRNQ4KMQ1 711 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 EMILIN1Q9Y6C2 1016 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 ADGRB3O60242 1522 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 IL16Q14005 1332 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 FOXD4L6Q3SYB3 417 aaPredicted RBP22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 FOXD4L3Q6VB84 417 aaPredicted RBP22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
TUBGCP3-202ENST00000375669 IDI1Q13907 227 aa22.03■■□□□ 1.12
TUBGCP3-202ENST00000375669 IFT172Q9UG01 1749 aa22.03■■□□□ 1.12
TUBGCP3-202ENST00000375669 ZRANB1Q9UGI0 708 aa22.03■■□□□ 1.12
TUBGCP3-202ENST00000375669 TERF2IPQ9NYB0 399 aa22.03■■□□□ 1.12
TUBGCP3-202ENST00000375669 INO80Q9ULG1 1556 aaPredicted RBP22.03■■□□□ 1.12
TUBGCP3-202ENST00000375669 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.12
TUBGCP3-202ENST00000375669 NSD2O96028 1365 aa22.02■■□□□ 1.12
TUBGCP3-202ENST00000375669 NOL8Q76FK4 1167 aaKnown RBP22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 MPNDQ8N594 471 aa22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 POLKQ9UBT6 870 aa22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 NSFL1CQ9UNZ2 370 aaKnown RBP22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 CFAP74Q9C0B2 1584 aa22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 CYP2E1P05181 493 aaPredicted RBP22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 MYRIPQ8NFW9 859 aa22.01■■□□□ 1.11
TUBGCP3-202ENST00000375669 NCBP3Q53F19 620 aaKnown RBP22■■□□□ 1.11
TUBGCP3-202ENST00000375669 FCHSD2O94868 740 aa22■■□□□ 1.11
TUBGCP3-202ENST00000375669 RNF214Q8ND24 703 aa22■■□□□ 1.11
TUBGCP3-202ENST00000375669 CDK19Q9BWU1 502 aa22■■□□□ 1.11
TUBGCP3-202ENST00000375669 SETBP1Q9Y6X0 1596 aa22■■□□□ 1.11
TUBGCP3-202ENST00000375669 LRSAM1Q6UWE0 723 aa22■■□□□ 1.11
TUBGCP3-202ENST00000375669 RAPGEF3O95398 923 aa21.99■■□□□ 1.11
TUBGCP3-202ENST00000375669 GPT2Q8TD30 523 aa21.99■■□□□ 1.11
TUBGCP3-202ENST00000375669 GLI2P10070 1586 aa21.99■■□□□ 1.11
TUBGCP3-202ENST00000375669 TSHZ3Q63HK5 1081 aa21.99■■□□□ 1.11
TUBGCP3-202ENST00000375669 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
TUBGCP3-202ENST00000375669 GTPBP4Q9BZE4 634 aaKnown RBP21.98■■□□□ 1.11
TUBGCP3-202ENST00000375669 KIAA2012Q0VF49 1180 aa21.97■■□□□ 1.11
TUBGCP3-202ENST00000375669 WAPLQ7Z5K2 1190 aa21.97■■□□□ 1.11
TUBGCP3-202ENST00000375669 USP26Q9BXU7 913 aa21.97■■□□□ 1.11
TUBGCP3-202ENST00000375669 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
TUBGCP3-202ENST00000375669 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
TUBGCP3-202ENST00000375669 HDGFL2Q7Z4V5 671 aaPredicted RBP21.96■■□□□ 1.11
TUBGCP3-202ENST00000375669 SYCE3A1L190 88 aa21.96■■□□□ 1.11
TUBGCP3-202ENST00000375669 SDSP20132 328 aa21.96■■□□□ 1.11
TUBGCP3-202ENST00000375669 TTC22Q5TAA0 569 aa21.95■■□□□ 1.1
TUBGCP3-202ENST00000375669 ZDHHC9Q9Y397 364 aa21.95■■□□□ 1.1
TUBGCP3-202ENST00000375669 RABEP1Q15276 862 aa21.94■■□□□ 1.1
TUBGCP3-202ENST00000375669 ZNF710Q8N1W2 664 aa21.94■■□□□ 1.1
TUBGCP3-202ENST00000375669 TMEM63CQ9P1W3 806 aa21.94■■□□□ 1.1
TUBGCP3-202ENST00000375669 NCKAP5LQ9HCH0 1330 aa21.94■■□□□ 1.1
TUBGCP3-202ENST00000375669 KIF20AO95235 890 aa21.94■■□□□ 1.1
TUBGCP3-202ENST00000375669 ABCC4O15439 1325 aa21.94■■□□□ 1.1
TUBGCP3-202ENST00000375669 CBX1P83916 185 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 DNTTIP2Q5QJE6 756 aaKnown RBP21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 RPGRIP1LQ68CZ1 1315 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 PTMAP06454 111 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms