RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 CAGE1Q8TC20 777 aa20.49■□□□□ 0.87
MCF2L-203ENST00000375604 SMARCA5O60264 1052 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-203ENST00000375604 SLC3A2P08195 630 aaKnown RBP20.49■□□□□ 0.87
MCF2L-203ENST00000375604 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
MCF2L-203ENST00000375604 SRCIN1Q9C0H9 1055 aa20.48■□□□□ 0.87
MCF2L-203ENST00000375604 SRGAP3O43295 1099 aa20.48■□□□□ 0.87
MCF2L-203ENST00000375604 GNL3LQ9NVN8 582 aaKnown RBP20.48■□□□□ 0.87
MCF2L-203ENST00000375604 TRIM5Q9C035 493 aa20.47■□□□□ 0.87
MCF2L-203ENST00000375604 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
MCF2L-203ENST00000375604 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
MCF2L-203ENST00000375604 NASPP49321 788 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-203ENST00000375604 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
MCF2L-203ENST00000375604 MNS1Q8NEH6 495 aa20.46■□□□□ 0.87
MCF2L-203ENST00000375604 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
MCF2L-203ENST00000375604 KIAA1107Q9UPP5 1409 aa20.46■□□□□ 0.87
MCF2L-203ENST00000375604 CEBPAP49715 358 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-203ENST00000375604 GPS2Q13227 327 aa20.46■□□□□ 0.87
MCF2L-203ENST00000375604 ERC1Q8IUD2 1116 aa20.46■□□□□ 0.87
MCF2L-203ENST00000375604 NUDT16Q96DE0 195 aaKnown RBP20.45■□□□□ 0.86
MCF2L-203ENST00000375604 MPHOSPH10O00566 681 aaKnown RBP20.45■□□□□ 0.86
MCF2L-203ENST00000375604 TRAK2O60296 914 aa20.45■□□□□ 0.86
MCF2L-203ENST00000375604 DCAF8L1A6NGE4 600 aa20.45■□□□□ 0.86
MCF2L-203ENST00000375604 STK38Q15208 465 aa20.45■□□□□ 0.86
MCF2L-203ENST00000375604 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
MCF2L-203ENST00000375604 NAT10Q9H0A0 1025 aaKnown RBP20.44■□□□□ 0.86
MCF2L-203ENST00000375604 FANCIQ9NVI1 1328 aa20.44■□□□□ 0.86
MCF2L-203ENST00000375604 RUFY1Q96T51 708 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-203ENST00000375604 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
MCF2L-203ENST00000375604 SETQ01105 290 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-203ENST00000375604 CHMP4BP1P59074 171 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 SLC4A8Q2Y0W8 1093 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 CYP46A1Q9Y6A2 500 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 USP5P45974 858 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 TDO2P48775 406 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
MCF2L-203ENST00000375604 KINO60870 393 aaKnown RBP20.42■□□□□ 0.86
MCF2L-203ENST00000375604 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
MCF2L-203ENST00000375604 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
MCF2L-203ENST00000375604 GCC1Q96CN9 775 aa20.42■□□□□ 0.86
MCF2L-203ENST00000375604 TSPY26PQ9H489 355 aa20.42■□□□□ 0.86
MCF2L-203ENST00000375604 DAPK1P53355 1430 aa20.42■□□□□ 0.86
MCF2L-203ENST00000375604 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 EXOC6BQ9Y2D4 811 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 MAGEC2Q9UBF1 373 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-203ENST00000375604 ABCF2Q9UG63 623 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-203ENST00000375604 CHD1LQ86WJ1 897 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 MYD88Q99836 296 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
MCF2L-203ENST00000375604 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 NME9Q86XW9 330 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 JAKMIP1Q96N16 626 aaKnown RBP20.4■□□□□ 0.86
MCF2L-203ENST00000375604 TANGO6Q9C0B7 1094 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 HIP1O00291 1037 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 FBXO31Q5XUX0 539 aaPredicted RBP20.4■□□□□ 0.86
MCF2L-203ENST00000375604 ATF7IPQ6VMQ6 1270 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 DDX11Q96FC9 970 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 TMEM57Q8N5G2 664 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 ME1P48163 572 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 MVPQ14764 893 aaKnown RBP20.4■□□□□ 0.86
MCF2L-203ENST00000375604 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
MCF2L-203ENST00000375604 SSBP05455 408 aaKnown RBP eCLIP20.39■□□□□ 0.85
MCF2L-203ENST00000375604 FAM177A1Q8N128 213 aaPredicted RBP20.39■□□□□ 0.85
MCF2L-203ENST00000375604 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
MCF2L-203ENST00000375604 STAC3Q96MF2 364 aa20.38■□□□□ 0.85
MCF2L-203ENST00000375604 LARP6Q9BRS8 491 aaKnown RBP20.38■□□□□ 0.85
MCF2L-203ENST00000375604 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
MCF2L-203ENST00000375604 F6X3S4 739 aa20.37■□□□□ 0.85
MCF2L-203ENST00000375604 PAF1Q8N7H5 531 aa20.37■□□□□ 0.85
MCF2L-203ENST00000375604 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
MCF2L-203ENST00000375604 ZNF396Q96N95 335 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-203ENST00000375604 NACAP1Q9BZK3 213 aa20.37■□□□□ 0.85
MCF2L-203ENST00000375604 SERPINC1P01008 464 aa20.36■□□□□ 0.85
MCF2L-203ENST00000375604 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-203ENST00000375604 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
MCF2L-203ENST00000375604 TXLNAP40222 546 aa20.36■□□□□ 0.85
MCF2L-203ENST00000375604 MATR3P43243 847 aaKnown RBP eCLIP20.36■□□□□ 0.85
MCF2L-203ENST00000375604 DHX37Q8IY37 1157 aaKnown RBP20.36■□□□□ 0.85
MCF2L-203ENST00000375604 TOPBP1Q92547 1522 aa20.36■□□□□ 0.85
MCF2L-203ENST00000375604 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
MCF2L-203ENST00000375604 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
MCF2L-203ENST00000375604 METTL24Q5JXM2 366 aa20.35■□□□□ 0.85
MCF2L-203ENST00000375604 WWC2Q6AWC2 1192 aa20.35■□□□□ 0.85
MCF2L-203ENST00000375604 FBLN1P23142 703 aa20.35■□□□□ 0.85
MCF2L-203ENST00000375604 CCDC39Q9UFE4 941 aa20.35■□□□□ 0.85
MCF2L-203ENST00000375604 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
MCF2L-203ENST00000375604 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
MCF2L-203ENST00000375604 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
MCF2L-203ENST00000375604 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
MCF2L-203ENST00000375604 LARP1BQ659C4 914 aaKnown RBP20.34■□□□□ 0.85
MCF2L-203ENST00000375604 RABEP1Q15276 862 aa20.34■□□□□ 0.85
MCF2L-203ENST00000375604 TMOD3Q9NYL9 352 aa20.34■□□□□ 0.85
MCF2L-203ENST00000375604 EMILIN1Q9Y6C2 1016 aa20.34■□□□□ 0.85
MCF2L-203ENST00000375604 AK7Q96M32 723 aa20.34■□□□□ 0.85
MCF2L-203ENST00000375604 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
MCF2L-203ENST00000375604 FOXO3O43524 673 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms