RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 IL1RAPL2Q9NP60 686 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 EXOC6BQ9Y2D4 811 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 SYCE3A1L190 88 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 NLRP2Q9NX02 1062 aa13.78□□□□□ -0.2
PTCH1-203ENST00000375274 GPRASP1Q5JY77 1395 aa13.77□□□□□ -0.2
PTCH1-203ENST00000375274 UQCRHLA0A096LP55 91 aa13.77□□□□□ -0.2
PTCH1-203ENST00000375274 ERICH2A1L162 156 aa13.77□□□□□ -0.2
PTCH1-203ENST00000375274 UQCRHP07919 91 aa13.77□□□□□ -0.2
PTCH1-203ENST00000375274 TNPO1Q92973 898 aaKnown RBP13.77□□□□□ -0.2
PTCH1-203ENST00000375274 PCMTD1Q96MG8 357 aaPredicted RBP13.77□□□□□ -0.21
PTCH1-203ENST00000375274 DNAJC2Q99543 621 aaKnown RBP13.77□□□□□ -0.21
PTCH1-203ENST00000375274 SRGAP3O43295 1099 aa13.77□□□□□ -0.21
PTCH1-203ENST00000375274 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
PTCH1-203ENST00000375274 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
PTCH1-203ENST00000375274 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
PTCH1-203ENST00000375274 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
PTCH1-203ENST00000375274 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
PTCH1-203ENST00000375274 PLB1Q6P1J6 1458 aa13.76□□□□□ -0.21
PTCH1-203ENST00000375274 CCDC47Q96A33 483 aaKnown RBP13.76□□□□□ -0.21
PTCH1-203ENST00000375274 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
PTCH1-203ENST00000375274 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-203ENST00000375274 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
PTCH1-203ENST00000375274 EVA1CP58658 441 aa13.76□□□□□ -0.21
PTCH1-203ENST00000375274 SMC2O95347 1197 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 SSFA2P28290 1259 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 PLEKHO1Q53GL0 409 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-203ENST00000375274 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 STK38Q15208 465 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 PDILTQ8N807 584 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-203ENST00000375274 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 CUL7Q14999 1698 aa13.75□□□□□ -0.21
PTCH1-203ENST00000375274 STK3Q13188 491 aa13.74□□□□□ -0.21
PTCH1-203ENST00000375274 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
PTCH1-203ENST00000375274 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
PTCH1-203ENST00000375274 CWC27Q6UX04 472 aaKnown RBP13.74□□□□□ -0.21
PTCH1-203ENST00000375274 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
PTCH1-203ENST00000375274 ADGRF5Q8IZF2 1346 aa13.74□□□□□ -0.21
PTCH1-203ENST00000375274 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
PTCH1-203ENST00000375274 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
PTCH1-203ENST00000375274 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
PTCH1-203ENST00000375274 PDE4CQ08493 712 aa13.73□□□□□ -0.21
PTCH1-203ENST00000375274 CCDC112Q8NEF3 446 aa13.73□□□□□ -0.21
PTCH1-203ENST00000375274 ZSCAN31Q96LW9 406 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-203ENST00000375274 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
PTCH1-203ENST00000375274 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
PTCH1-203ENST00000375274 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-203ENST00000375274 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 PKNOX2Q96KN3 472 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 SIL1Q9H173 461 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 PDRG1Q9NUG6 133 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 ME1P48163 572 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 VPS37DQ86XT2 251 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 PCDHB15Q9Y5E8 787 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 MX1P20591 662 aa13.72□□□□□ -0.21
PTCH1-203ENST00000375274 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
PTCH1-203ENST00000375274 ACBD3Q9H3P7 528 aa13.71□□□□□ -0.21
PTCH1-203ENST00000375274 SCAF11Q99590 1463 aaKnown RBP13.71□□□□□ -0.21
PTCH1-203ENST00000375274 RAPGEF3O95398 923 aa13.71□□□□□ -0.21
PTCH1-203ENST00000375274 ATP2B1P20020 1258 aa13.71□□□□□ -0.21
PTCH1-203ENST00000375274 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
PTCH1-203ENST00000375274 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
PTCH1-203ENST00000375274 G3V3G9 751 aa13.71□□□□□ -0.22
PTCH1-203ENST00000375274 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.22
PTCH1-203ENST00000375274 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.22
PTCH1-203ENST00000375274 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.22
PTCH1-203ENST00000375274 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
PTCH1-203ENST00000375274 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-203ENST00000375274 MCM10Q7L590 875 aa13.7□□□□□ -0.22
PTCH1-203ENST00000375274 AACSQ86V21 672 aa13.7□□□□□ -0.22
PTCH1-203ENST00000375274 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
PTCH1-203ENST00000375274 PARD3Q8TEW0 1356 aa13.7□□□□□ -0.22
PTCH1-203ENST00000375274 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
PTCH1-203ENST00000375274 CCDC66A2RUB6 948 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 XBP1P17861 261 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 CCP110O43303 1012 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 FERMT3Q86UX7 667 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
PTCH1-203ENST00000375274 FILIP1Q7Z7B0 1213 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
PTCH1-203ENST00000375274 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 NOL10Q9BSC4 688 aaKnown RBP13.69□□□□□ -0.22
PTCH1-203ENST00000375274 CFAP45Q9UL16 551 aa13.69□□□□□ -0.22
PTCH1-203ENST00000375274 KDM4AO75164 1064 aa13.68□□□□□ -0.22
PTCH1-203ENST00000375274 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
PTCH1-203ENST00000375274 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
PTCH1-203ENST00000375274 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
PTCH1-203ENST00000375274 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
PTCH1-203ENST00000375274 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
PTCH1-203ENST00000375274 RALGAPBQ86X10 1494 aa13.68□□□□□ -0.22
PTCH1-203ENST00000375274 XPCQ01831 940 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-203ENST00000375274 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-203ENST00000375274 GLRX3O76003 335 aaKnown RBP13.67□□□□□ -0.22
PTCH1-203ENST00000375274 DHX8Q14562 1220 aaKnown RBP13.67□□□□□ -0.22
PTCH1-203ENST00000375274 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms