RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
SRPK1-204ENST00000373825 CAPN2P17655 700 aa18.24■□□□□ 0.51
SRPK1-204ENST00000373825 LARP1BQ659C4 914 aaKnown RBP18.24■□□□□ 0.51
SRPK1-204ENST00000373825 SMTNL1A8MU46 457 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 ERLIN1O75477 346 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 MCM6Q14566 821 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 CTR9Q6PD62 1173 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 TICAM2Q86XR7 235 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 RLBP1P12271 317 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■■ 27.7
SRPK1-204ENST00000373825 TMEM63CQ9P1W3 806 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 CLGNO14967 610 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 TIAM1Q13009 1591 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
SRPK1-204ENST00000373825 USP48Q86UV5 1035 aa18.23■□□□□ 0.51
SRPK1-204ENST00000373825 SFPQP23246 707 aaKnown RBP eCLIP18.22■□□□□ 0.51
SRPK1-204ENST00000373825 SNW1Q13573 536 aaKnown RBP18.22■□□□□ 0.51
SRPK1-204ENST00000373825 NEK11Q8NG66 645 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 TPM1P09493 284 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 ARHGAP29Q52LW3 1261 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 CCDC9Q9Y3X0 531 aaKnown RBP18.22■□□□□ 0.51
SRPK1-204ENST00000373825 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
SRPK1-204ENST00000373825 ELF2Q15723 593 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 SPATA32Q96LK8 384 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 SERPINC1P01008 464 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 SSH1Q8WYL5 1049 aa18.22■□□□□ 0.51
SRPK1-204ENST00000373825 SKILP12757 684 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 ZNF165P49910 485 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 STK3Q13188 491 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 KIF2AO00139 706 aaPredicted RBP18.21■□□□□ 0.51
SRPK1-204ENST00000373825 PHACTR2O75167 634 aa18.21■□□□□ 0.51
SRPK1-204ENST00000373825 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
SRPK1-204ENST00000373825 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
SRPK1-204ENST00000373825 DDX54Q8TDD1 881 aaKnown RBP18.2■□□□□ 0.5
SRPK1-204ENST00000373825 NAIPQ13075 1403 aa18.2■□□□□ 0.5
SRPK1-204ENST00000373825 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
SRPK1-204ENST00000373825 TSR1Q2NL82 804 aaKnown RBP18.2■□□□□ 0.5
SRPK1-204ENST00000373825 CCP110O43303 1012 aa18.19■□□□□ 0.5
SRPK1-204ENST00000373825 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
SRPK1-204ENST00000373825 LMBRD1Q9NUN5 540 aa18.19■□□□□ 0.5
SRPK1-204ENST00000373825 TRIM27P14373 513 aa18.19■□□□□ 0.5
SRPK1-204ENST00000373825 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
SRPK1-204ENST00000373825 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
SRPK1-204ENST00000373825 KDM4AO75164 1064 aa18.19■□□□□ 0.5
SRPK1-204ENST00000373825 MAP4K4O95819 1239 aaPredicted RBP18.19■□□□□ 0.5
SRPK1-204ENST00000373825 CAGE1Q8TC20 777 aa18.18■□□□□ 0.5
SRPK1-204ENST00000373825 TFIP11Q9UBB9 837 aaKnown RBP18.18■□□□□ 0.5
SRPK1-204ENST00000373825 TMX3Q96JJ7 454 aa18.18■□□□□ 0.5
SRPK1-204ENST00000373825 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
SRPK1-204ENST00000373825 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
SRPK1-204ENST00000373825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.18■□□□□ 0.54e-7■■■□□ 14.6
SRPK1-204ENST00000373825 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
SRPK1-204ENST00000373825 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
SRPK1-204ENST00000373825 DNAI1Q9UI46 699 aa18.17■□□□□ 0.5
SRPK1-204ENST00000373825 CCDC83Q8IWF9 413 aa18.17■□□□□ 0.5
SRPK1-204ENST00000373825 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
SRPK1-204ENST00000373825 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
SRPK1-204ENST00000373825 HMOX1P09601 288 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
SRPK1-204ENST00000373825 MYCBPQ99417 103 aaPredicted RBP18.16■□□□□ 0.5
SRPK1-204ENST00000373825 CCDC91Q7Z6B0 441 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 SLC26A8Q96RN1 970 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 ARFGAP3Q9NP61 516 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 MX1P20591 662 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 PDCP20941 246 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 CEP57L1Q8IYX8 460 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 ANKRD20A12PQ8NF67 263 aa18.16■□□□□ 0.5
SRPK1-204ENST00000373825 IPO7O95373 1038 aaKnown RBP18.15■□□□□ 0.5
SRPK1-204ENST00000373825 ME1P48163 572 aa18.15■□□□□ 0.5
SRPK1-204ENST00000373825 PKP1Q13835 747 aa18.15■□□□□ 0.5
SRPK1-204ENST00000373825 NUTM2DQ5VT03 806 aaPredicted RBP18.15■□□□□ 0.5
SRPK1-204ENST00000373825 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
SRPK1-204ENST00000373825 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
SRPK1-204ENST00000373825 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
SRPK1-204ENST00000373825 UBE2HP62256 183 aa18.14■□□□□ 0.49
SRPK1-204ENST00000373825 VPS18Q9P253 973 aa18.14■□□□□ 0.49
SRPK1-204ENST00000373825 LUZP1Q86V48 1076 aa18.14■□□□□ 0.49
SRPK1-204ENST00000373825 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
SRPK1-204ENST00000373825 ZSCAN26Q16670 478 aa18.13■□□□□ 0.49
SRPK1-204ENST00000373825 RNF187Q5TA31 235 aaPredicted RBP18.13■□□□□ 0.49
SRPK1-204ENST00000373825 IVLP07476 585 aa18.13■□□□□ 0.49
SRPK1-204ENST00000373825 CASTP20810 708 aaKnown RBP18.13■□□□□ 0.49
SRPK1-204ENST00000373825 E2F4Q16254 413 aa18.13■□□□□ 0.49
SRPK1-204ENST00000373825 ANO6Q4KMQ2 910 aa18.13■□□□□ 0.49
SRPK1-204ENST00000373825 CFAP100Q494V2 611 aa18.12■□□□□ 0.49
SRPK1-204ENST00000373825 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
SRPK1-204ENST00000373825 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
SRPK1-204ENST00000373825 SHTN1A0MZ66 631 aa18.12■□□□□ 0.49
SRPK1-204ENST00000373825 HDGFL2Q7Z4V5 671 aaPredicted RBP18.12■□□□□ 0.49
SRPK1-204ENST00000373825 FAM200AQ8TCP9 573 aa18.12■□□□□ 0.49
SRPK1-204ENST00000373825 CFTRP13569 1480 aa18.12■□□□□ 0.49
SRPK1-204ENST00000373825 SYT10Q6XYQ8 523 aa18.12■□□□□ 0.49
SRPK1-204ENST00000373825 CCDC171Q6TFL3 1326 aa18.11■□□□□ 0.49
SRPK1-204ENST00000373825 CRACR2AQ9BSW2 395 aa18.11■□□□□ 0.49
SRPK1-204ENST00000373825 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
SRPK1-204ENST00000373825 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
SRPK1-204ENST00000373825 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms