RNA–Protein interactions for RNA: ENST00000373742.6

PUM1-203, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2 BASIC

Gene PUM1, Length 3,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-203ENST00000373742 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
PUM1-203ENST00000373742 KRT24Q2M2I5 525 aa11.34□□□□□ -0.59
PUM1-203ENST00000373742 PEAK1Q9H792 1746 aa11.34□□□□□ -0.59
PUM1-203ENST00000373742 NRKQ7Z2Y5 1582 aa11.33□□□□□ -0.59
PUM1-203ENST00000373742 FTSJ3Q8IY81 847 aaKnown RBP11.33□□□□□ -0.6
PUM1-203ENST00000373742 AATKQ6ZMQ8 1374 aa11.33□□□□□ -0.6
PUM1-203ENST00000373742 MS4A1P11836 297 aa11.33□□□□□ -0.6
PUM1-203ENST00000373742 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
PUM1-203ENST00000373742 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
PUM1-203ENST00000373742 IPO9Q96P70 1041 aaKnown RBP11.33□□□□□ -0.6
PUM1-203ENST00000373742 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
PUM1-203ENST00000373742 FOXO3O43524 673 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 MCM10Q7L590 875 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 ITPRIPQ8IWB1 547 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
PUM1-203ENST00000373742 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
PUM1-203ENST00000373742 DIP2AQ14689 1571 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 OVOS2A0A0J9YW53 1432 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 OVOS2Q6IE36 1432 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
PUM1-203ENST00000373742 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
PUM1-203ENST00000373742 NEFMP07197 916 aa11.31□□□□□ -0.6
PUM1-203ENST00000373742 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
PUM1-203ENST00000373742 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
PUM1-203ENST00000373742 MIS18AQ9NYP9 233 aa11.31□□□□□ -0.6
PUM1-203ENST00000373742 DLG5Q8TDM6 1919 aa11.31□□□□□ -0.6
PUM1-203ENST00000373742 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
PUM1-203ENST00000373742 NBR1Q14596 966 aa11.3□□□□□ -0.6
PUM1-203ENST00000373742 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
PUM1-203ENST00000373742 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
PUM1-203ENST00000373742 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
PUM1-203ENST00000373742 SEC24BO95487 1268 aa11.3□□□□□ -0.6
PUM1-203ENST00000373742 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
PUM1-203ENST00000373742 IL16Q14005 1332 aa11.29□□□□□ -0.6
PUM1-203ENST00000373742 VAMP4O75379 141 aa11.29□□□□□ -0.6
PUM1-203ENST00000373742 NLRP6P59044 892 aa11.29□□□□□ -0.6
PUM1-203ENST00000373742 XPCQ01831 940 aaPredicted RBP11.29□□□□□ -0.6
PUM1-203ENST00000373742 LTV1Q96GA3 475 aaPredicted RBP11.29□□□□□ -0.6
PUM1-203ENST00000373742 PTCH1Q13635 1447 aa11.29□□□□□ -0.6
PUM1-203ENST00000373742 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
PUM1-203ENST00000373742 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
PUM1-203ENST00000373742 XRN1Q8IZH2 1706 aaKnown RBP11.28□□□□□ -0.6
PUM1-203ENST00000373742 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.6
PUM1-203ENST00000373742 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
PUM1-203ENST00000373742 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
PUM1-203ENST00000373742 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
PUM1-203ENST00000373742 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
PUM1-203ENST00000373742 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
PUM1-203ENST00000373742 USHBP1Q8N6Y0 703 aa11.27□□□□□ -0.61
PUM1-203ENST00000373742 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
PUM1-203ENST00000373742 BCL11AQ9H165 835 aa11.26□□□□□ -0.61
PUM1-203ENST00000373742 AMPHP49418 695 aa11.26□□□□□ -0.61
PUM1-203ENST00000373742 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
PUM1-203ENST00000373742 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
PUM1-203ENST00000373742 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
PUM1-203ENST00000373742 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
PUM1-203ENST00000373742 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
PUM1-203ENST00000373742 EYA1Q99502 592 aa11.25□□□□□ -0.61
PUM1-203ENST00000373742 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
PUM1-203ENST00000373742 NALCNQ8IZF0 1738 aa11.25□□□□□ -0.61
PUM1-203ENST00000373742 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
PUM1-203ENST00000373742 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
PUM1-203ENST00000373742 GNAI1P63096 354 aa11.25□□□□□ -0.61
PUM1-203ENST00000373742 ESCO1Q5FWF5 840 aa11.24□□□□□ -0.61
PUM1-203ENST00000373742 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
PUM1-203ENST00000373742 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
PUM1-203ENST00000373742 TTC21AQ8NDW8 1320 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
PUM1-203ENST00000373742 ALDH1L2Q3SY69 923 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
PUM1-203ENST00000373742 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 HOXC9P31274 260 aa11.22□□□□□ -0.61
PUM1-203ENST00000373742 FMN2Q9NZ56 1722 aa11.21□□□□□ -0.61
PUM1-203ENST00000373742 FLT4P35916 1363 aa11.21□□□□□ -0.61
PUM1-203ENST00000373742 SETD1BQ9UPS6 1966 aaKnown RBP11.21□□□□□ -0.61
PUM1-203ENST00000373742 SBNO1A3KN83 1393 aa11.21□□□□□ -0.62
PUM1-203ENST00000373742 USP19O94966 1318 aa11.21□□□□□ -0.62
PUM1-203ENST00000373742 NECTIN2Q92692 538 aa11.21□□□□□ -0.62
PUM1-203ENST00000373742 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
PUM1-203ENST00000373742 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
PUM1-203ENST00000373742 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
PUM1-203ENST00000373742 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
PUM1-203ENST00000373742 ZBTB7BO15156 539 aaPredicted RBP11.2□□□□□ -0.62
PUM1-203ENST00000373742 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
PUM1-203ENST00000373742 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
PUM1-203ENST00000373742 ADAMTSL3P82987 1691 aa11.19□□□□□ -0.62
PUM1-203ENST00000373742 CHL1O00533 1208 aa11.19□□□□□ -0.62
PUM1-203ENST00000373742 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
PUM1-203ENST00000373742 PSME1Q06323 249 aa11.19□□□□□ -0.62
PUM1-203ENST00000373742 SIRT2Q8IXJ6 389 aa11.19□□□□□ -0.62
PUM1-203ENST00000373742 CRB1P82279 1406 aa11.18□□□□□ -0.62
PUM1-203ENST00000373742 LRRC59Q96AG4 307 aaKnown RBP11.18□□□□□ -0.62
PUM1-203ENST00000373742 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
PUM1-203ENST00000373742 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
PUM1-203ENST00000373742 G2E3Q7L622 706 aa11.18□□□□□ -0.62
PUM1-203ENST00000373742 ARHGEF10O15013 1369 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms