RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 OVOS2A0A0J9YW53 1432 aa25.22■■□□□ 1.63
PBX3-205ENST00000373492 OVOS2Q6IE36 1432 aa25.22■■□□□ 1.63
PBX3-205ENST00000373492 SPATA31A1Q5TZJ5 1347 aa25.22■■□□□ 1.63
PBX3-205ENST00000373492 COL5A2P05997 1499 aaPredicted RBP25.21■■□□□ 1.63
PBX3-205ENST00000373492 RGPD5Q99666 1765 aa25.21■■□□□ 1.63
PBX3-205ENST00000373492 FAM98CQ17RN3 349 aaKnown RBP25.2■■□□□ 1.62
PBX3-205ENST00000373492 UPF1Q92900 1129 aaKnown RBP eCLIP25.2■■□□□ 1.62
PBX3-205ENST00000373492 COG3Q96JB2 828 aa25.2■■□□□ 1.62
PBX3-205ENST00000373492 CGNL1Q0VF96 1302 aa25.19■■□□□ 1.62
PBX3-205ENST00000373492 LARP1Q6PKG0 1096 aaKnown RBP25.19■■□□□ 1.62
PBX3-205ENST00000373492 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
PBX3-205ENST00000373492 AXIN2Q9Y2T1 843 aa25.18■■□□□ 1.62
PBX3-205ENST00000373492 COL18A1P39060 1754 aa25.18■■□□□ 1.62
PBX3-205ENST00000373492 ABCC6O95255 1503 aa25.17■■□□□ 1.62
PBX3-205ENST00000373492 FYB1O15117 783 aa25.17■■□□□ 1.62
PBX3-205ENST00000373492 THRAP3Q9Y2W1 955 aaKnown RBP25.16■■□□□ 1.62
PBX3-205ENST00000373492 A0A0G2JS52 829 aa25.15■■□□□ 1.62
PBX3-205ENST00000373492 MYT1Q01538 1121 aa25.15■■□□□ 1.62
PBX3-205ENST00000373492 BARGINQ6ZT62 677 aa25.15■■□□□ 1.62
PBX3-205ENST00000373492 TCP11L2Q8N4U5 519 aa25.15■■□□□ 1.62
PBX3-205ENST00000373492 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
PBX3-205ENST00000373492 KNSTRNQ9Y448 316 aa25.15■■□□□ 1.62
PBX3-205ENST00000373492 USP35Q9P2H5 1018 aa25.14■■□□□ 1.62
PBX3-205ENST00000373492 CRB1P82279 1406 aa25.13■■□□□ 1.61
PBX3-205ENST00000373492 KRT27Q7Z3Y8 459 aa25.13■■□□□ 1.61
PBX3-205ENST00000373492 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
PBX3-205ENST00000373492 NSD2O96028 1365 aa25.11■■□□□ 1.61
PBX3-205ENST00000373492 TOM1L2Q6ZVM7 507 aa25.11■■□□□ 1.61
PBX3-205ENST00000373492 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
PBX3-205ENST00000373492 BRWD3Q6RI45 1802 aa25.09■■□□□ 1.61
PBX3-205ENST00000373492 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
PBX3-205ENST00000373492 CCDC125Q86Z20 511 aa25.07■■□□□ 1.6
PBX3-205ENST00000373492 IP6K1Q92551 441 aa25.07■■□□□ 1.6
PBX3-205ENST00000373492 CARD10Q9BWT7 1032 aa25.06■■□□□ 1.6
PBX3-205ENST00000373492 BLMP54132 1417 aaPredicted RBP25.05■■□□□ 1.6
PBX3-205ENST00000373492 EP400Q96L91 3159 aa25.05■■□□□ 1.6
PBX3-205ENST00000373492 PER1O15534 1290 aaPredicted RBP25.05■■□□□ 1.6
PBX3-205ENST00000373492 ERBB3P21860 1342 aa25.05■■□□□ 1.6
PBX3-205ENST00000373492 MAP3K19Q56UN5 1328 aa25.05■■□□□ 1.6
PBX3-205ENST00000373492 FBLN1P23142 703 aa25.02■■□□□ 1.6
PBX3-205ENST00000373492 AMPHP49418 695 aa25.02■■□□□ 1.6
PBX3-205ENST00000373492 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
PBX3-205ENST00000373492 CDCA7Q9BWT1 371 aaPredicted RBP25.02■■□□□ 1.6
PBX3-205ENST00000373492 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
PBX3-205ENST00000373492 ZNF316A6NFI3 1004 aaPredicted RBP25.01■■□□□ 1.59
PBX3-205ENST00000373492 HOXC9P31274 260 aa25.01■■□□□ 1.59
PBX3-205ENST00000373492 AMER1Q5JTC6 1135 aaPredicted RBP25.01■■□□□ 1.59
PBX3-205ENST00000373492 RTL1A6NKG5 1358 aa25.01■■□□□ 1.59
PBX3-205ENST00000373492 PDE3BQ13370 1112 aa25■■□□□ 1.59
PBX3-205ENST00000373492 RRS1Q15050 365 aaKnown RBP25■■□□□ 1.59
PBX3-205ENST00000373492 MORC1Q86VD1 984 aa25■■□□□ 1.59
PBX3-205ENST00000373492 NPC1L1Q9UHC9 1359 aa24.99■■□□□ 1.59
PBX3-205ENST00000373492 KIF24Q5T7B8 1368 aa24.98■■□□□ 1.59
PBX3-205ENST00000373492 NLRP2Q9NX02 1062 aa24.98■■□□□ 1.59
PBX3-205ENST00000373492 PEAK1Q9H792 1746 aa24.98■■□□□ 1.59
PBX3-205ENST00000373492 DDX10Q13206 875 aaKnown RBP24.97■■□□□ 1.59
PBX3-205ENST00000373492 RGPD2P0DJD1 1756 aa24.97■■□□□ 1.59
PBX3-205ENST00000373492 PARP4Q9UKK3 1724 aaKnown RBP24.96■■□□□ 1.59
PBX3-205ENST00000373492 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
PBX3-205ENST00000373492 FAM196AQ6ZSG2 479 aa24.96■■□□□ 1.59
PBX3-205ENST00000373492 TNNT2P45379 298 aaPredicted RBP24.95■■□□□ 1.58
PBX3-205ENST00000373492 DDB1Q16531 1140 aa24.95■■□□□ 1.58
PBX3-205ENST00000373492 WNK3Q9BYP7 1800 aa24.95■■□□□ 1.58
PBX3-205ENST00000373492 SF3B2Q13435 895 aaKnown RBP24.94■■□□□ 1.58
PBX3-205ENST00000373492 FAM182BQ5T319 152 aa24.94■■□□□ 1.58
PBX3-205ENST00000373492 LTV1Q96GA3 475 aaPredicted RBP24.94■■□□□ 1.58
PBX3-205ENST00000373492 DISP2A7MBM2 1401 aa24.94■■□□□ 1.58
PBX3-205ENST00000373492 FLT4P35916 1363 aa24.93■■□□□ 1.58
PBX3-205ENST00000373492 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
PBX3-205ENST00000373492 INSRP06213 1382 aa24.91■■□□□ 1.58
PBX3-205ENST00000373492 EXOC5O00471 708 aa24.9■■□□□ 1.58
PBX3-205ENST00000373492 SMG6Q86US8 1419 aaKnown RBP24.89■■□□□ 1.58
PBX3-205ENST00000373492 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.58
PBX3-205ENST00000373492 IL2RBP14784 551 aa24.89■■□□□ 1.58
PBX3-205ENST00000373492 HSP90AB2PQ58FF8 381 aa24.89■■□□□ 1.58
PBX3-205ENST00000373492 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.58
PBX3-205ENST00000373492 LRRC37A3O60309 1634 aa24.89■■□□□ 1.57
PBX3-205ENST00000373492 POLKQ9UBT6 870 aa24.88■■□□□ 1.57
PBX3-205ENST00000373492 OVOS2A0A0G2JMS6 1433 aa24.86■■□□□ 1.57
PBX3-205ENST00000373492 MARCH10Q8NA82 808 aaPredicted RBP24.84■■□□□ 1.57
PBX3-205ENST00000373492 TNS2Q63HR2 1409 aa24.84■■□□□ 1.57
PBX3-205ENST00000373492 TRIM37O94972 964 aa24.83■■□□□ 1.57
PBX3-205ENST00000373492 BAG6P46379 1132 aa24.83■■□□□ 1.57
PBX3-205ENST00000373492 NBPF6Q5VWK0 638 aa24.83■■□□□ 1.57
PBX3-205ENST00000373492 NBPF4Q96M43 638 aa24.83■■□□□ 1.57
PBX3-205ENST00000373492 BCL9O00512 1426 aa24.83■■□□□ 1.57
PBX3-205ENST00000373492 RGPD1P0DJD0 1748 aa24.83■■□□□ 1.57
PBX3-205ENST00000373492 DEFB132Q7Z7B7 95 aa24.82■■□□□ 1.56
PBX3-205ENST00000373492 MTHFSP49914 203 aa24.77■■□□□ 1.56
PBX3-205ENST00000373492 PARD3Q8TEW0 1356 aa24.77■■□□□ 1.56
PBX3-205ENST00000373492 TNS1Q9HBL0 1735 aaKnown RBP24.75■■□□□ 1.55
PBX3-205ENST00000373492 APBA3O96018 575 aa24.75■■□□□ 1.55
PBX3-205ENST00000373492 USHBP1Q8N6Y0 703 aa24.75■■□□□ 1.55
PBX3-205ENST00000373492 RAPGEF4Q8WZA2 1011 aa24.75■■□□□ 1.55
PBX3-205ENST00000373492 EN1Q05925 392 aaPredicted RBP24.74■■□□□ 1.55
PBX3-205ENST00000373492 BCL11BQ9C0K0 894 aaPredicted RBP24.74■■□□□ 1.55
PBX3-205ENST00000373492 RALBP1Q15311 655 aa24.73■■□□□ 1.55
PBX3-205ENST00000373492 ZCRB1Q8TBF4 217 aaKnown RBP24.73■■□□□ 1.55
PBX3-205ENST00000373492 MEGF6O75095 1541 aa24.72■■□□□ 1.55
PBX3-205ENST00000373492 NCAPD2Q15021 1401 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms