RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 SARNPP82979 210 aaKnown RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 ANAPC15P60006 121 aa17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 C16orf45Q96MC5 204 aaPredicted RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 ARID4AP29374 1257 aaPredicted RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 TTC31Q49AM3 519 aaPredicted RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 CCDC178Q5BJE1 867 aa17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 WIZO95785 1651 aa17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 EIF2S2P20042 333 aaKnown RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
GTF3C4-201ENST00000372146 SOGA3Q5TF21 947 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 ERCC6Q03468 1493 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 KIF3CO14782 793 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 WASHC4Q2M389 1173 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 SWAP70Q9UH65 585 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 CUX2O14529 1486 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 DYNC1I1O14576 645 aa17.96■□□□□ 0.47
GTF3C4-201ENST00000372146 CEP57Q86XR8 500 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 SUDS3Q9H7L9 328 aaPredicted RBP17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 GSTTP1A0A1W2PQM5 241 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 IMMTQ16891 758 aaKnown RBP17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 ZSCAN12O43309 604 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 IVLP07476 585 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 C1orf141Q5JVX7 400 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 CEP83Q9Y592 693 aa17.95■□□□□ 0.46
GTF3C4-201ENST00000372146 CFAP100Q494V2 611 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 WDR33Q9C0J8 1336 aaKnown RBP17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 ZHX3Q9H4I2 956 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 KRT85P78386 507 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 SETSIPP0DME0 302 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 SFPQP23246 707 aaKnown RBP eCLIP17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 CEP57L1Q8IYX8 460 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 TMX1Q9H3N1 280 aa17.94■□□□□ 0.46
GTF3C4-201ENST00000372146 NEBLO76041 1014 aa17.93■□□□□ 0.46
GTF3C4-201ENST00000372146 ATP2C2O75185 946 aa17.93■□□□□ 0.46
GTF3C4-201ENST00000372146 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
GTF3C4-201ENST00000372146 CCDC6Q16204 474 aa17.93■□□□□ 0.46
GTF3C4-201ENST00000372146 NUP62CLQ9H1M0 184 aa17.93■□□□□ 0.46
GTF3C4-201ENST00000372146 DESP17661 470 aa17.93■□□□□ 0.46
GTF3C4-201ENST00000372146 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 URI1O94763 535 aaPredicted RBP17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 STK3Q13188 491 aa17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 CAMK4Q16566 473 aa17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 SPATA32Q96LK8 384 aa17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
GTF3C4-201ENST00000372146 HYPKQ9NX55 129 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 K7ELQ4 463 aaPredicted RBP17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 SPA17Q15506 151 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 RSPH14Q9UHP6 348 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 ANKS4BQ8N8V4 417 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 MIPOL1Q8TD10 442 aa17.91■□□□□ 0.46
GTF3C4-201ENST00000372146 FBF1Q8TES7 1133 aa17.9■□□□□ 0.46
GTF3C4-201ENST00000372146 FKBP5Q13451 457 aaPredicted RBP17.9■□□□□ 0.46
GTF3C4-201ENST00000372146 MICALL1Q8N3F8 863 aa17.9■□□□□ 0.46
GTF3C4-201ENST00000372146 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
GTF3C4-201ENST00000372146 NEUROD6Q96NK8 337 aa17.9■□□□□ 0.46
GTF3C4-201ENST00000372146 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
GTF3C4-201ENST00000372146 NAA25Q14CX7 972 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 MAATS1Q7Z4T9 603 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 PANK3Q9H999 370 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 POTEB2H3BUK9 544 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 FSD1Q9BTV5 496 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 DNA2P51530 1060 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 KIF4BQ2VIQ3 1234 aa17.89■□□□□ 0.45
GTF3C4-201ENST00000372146 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 GRIPAP1Q4V328 841 aa17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 NOL3O60936 208 aaKnown RBP17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 PDIA4P13667 645 aaKnown RBP17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 GBP6Q6ZN66 633 aa17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 TTC5Q8N0Z6 440 aa17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 HLTFQ14527 1009 aaKnown RBP eCLIP17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 RSRC1Q96IZ7 334 aaKnown RBP17.88■□□□□ 0.45
GTF3C4-201ENST00000372146 CEP112Q8N8E3 955 aa17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 MLECQ14165 292 aa17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 TRMT1Q9NXH9 659 aaKnown RBP17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 FAM184BQ9ULE4 1060 aa17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 ERC1Q8IUD2 1116 aa17.87■□□□□ 0.45
GTF3C4-201ENST00000372146 CTNNBL1Q8WYA6 563 aaPredicted RBP17.86■□□□□ 0.45
GTF3C4-201ENST00000372146 PAIP2Q9BPZ3 127 aaKnown RBP17.86■□□□□ 0.45
GTF3C4-201ENST00000372146 HOOK3Q86VS8 718 aa17.86■□□□□ 0.45
GTF3C4-201ENST00000372146 API5Q9BZZ5 524 aaKnown RBP17.86■□□□□ 0.45
GTF3C4-201ENST00000372146 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
GTF3C4-201ENST00000372146 APBB1IPQ7Z5R6 666 aaPredicted RBP17.86■□□□□ 0.45
GTF3C4-201ENST00000372146 ANKRD1Q15327 319 aa17.85■□□□□ 0.45
GTF3C4-201ENST00000372146 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
GTF3C4-201ENST00000372146 MATR3P43243 847 aaKnown RBP eCLIP17.85■□□□□ 0.45
GTF3C4-201ENST00000372146 MCM4P33991 863 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms