RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 PPFIA3O75145 1194 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
PREX1-201ENST00000371941 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
PREX1-201ENST00000371941 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
PREX1-201ENST00000371941 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
PREX1-201ENST00000371941 RABEP1Q15276 862 aa16.22■□□□□ 0.19
PREX1-201ENST00000371941 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
PREX1-201ENST00000371941 AACSQ86V21 672 aa16.22■□□□□ 0.19
PREX1-201ENST00000371941 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
PREX1-201ENST00000371941 TPM3P06753 285 aa16.21■□□□□ 0.19
PREX1-201ENST00000371941 STAC3Q96MF2 364 aa16.21■□□□□ 0.19
PREX1-201ENST00000371941 TRIM5Q9C035 493 aa16.21■□□□□ 0.19
PREX1-201ENST00000371941 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
PREX1-201ENST00000371941 SSFA2P28290 1259 aa16.2■□□□□ 0.18
PREX1-201ENST00000371941 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
PREX1-201ENST00000371941 SYCE3A1L190 88 aa16.2■□□□□ 0.18
PREX1-201ENST00000371941 BTBD11A6QL63 1104 aa16.2■□□□□ 0.18
PREX1-201ENST00000371941 RALYLQ86SE5 291 aaKnown RBP16.2■□□□□ 0.18
PREX1-201ENST00000371941 GDPD2Q9HCC8 539 aa16.2■□□□□ 0.18
PREX1-201ENST00000371941 CAMK4Q16566 473 aa16.2■□□□□ 0.18
PREX1-201ENST00000371941 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
PREX1-201ENST00000371941 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
PREX1-201ENST00000371941 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
PREX1-201ENST00000371941 NOS1P29475 1434 aa16.19■□□□□ 0.18
PREX1-201ENST00000371941 TMX4Q9H1E5 349 aaPredicted RBP16.19■□□□□ 0.18
PREX1-201ENST00000371941 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
PREX1-201ENST00000371941 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
PREX1-201ENST00000371941 JAKMIP1Q96N16 626 aaKnown RBP16.19■□□□□ 0.18
PREX1-201ENST00000371941 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
PREX1-201ENST00000371941 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
PREX1-201ENST00000371941 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
PREX1-201ENST00000371941 FERMT3Q86UX7 667 aa16.18■□□□□ 0.18
PREX1-201ENST00000371941 A0A0U1RQG5 324 aaPredicted RBP16.18■□□□□ 0.18
PREX1-201ENST00000371941 SMC2O95347 1197 aa16.18■□□□□ 0.18
PREX1-201ENST00000371941 CCDC34Q96HJ3 373 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
PREX1-201ENST00000371941 PIBF1Q8WXW3 757 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 GRIN2AQ12879 1464 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 FCHSD2O94868 740 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
PREX1-201ENST00000371941 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 CCDC39Q9UFE4 941 aa16.17■□□□□ 0.18
PREX1-201ENST00000371941 ANXA1P04083 346 aa16.16■□□□□ 0.18
PREX1-201ENST00000371941 IDI1Q13907 227 aa16.16■□□□□ 0.18
PREX1-201ENST00000371941 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
PREX1-201ENST00000371941 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
PREX1-201ENST00000371941 AAMPQ13685 434 aa16.16■□□□□ 0.18
PREX1-201ENST00000371941 CPLX2Q6PUV4 134 aaKnown RBP16.16■□□□□ 0.18
PREX1-201ENST00000371941 CCT4P50991 539 aaKnown RBP16.16■□□□□ 0.18
PREX1-201ENST00000371941 CFAP65Q6ZU64 1925 aaKnown RBP16.16■□□□□ 0.18
PREX1-201ENST00000371941 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
PREX1-201ENST00000371941 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
PREX1-201ENST00000371941 GOLGA6L1Q8N7Z2 621 aa16.15■□□□□ 0.18
PREX1-201ENST00000371941 ERICH2A1L162 156 aa16.15■□□□□ 0.18
PREX1-201ENST00000371941 SEC24BO95487 1268 aa16.15■□□□□ 0.18
PREX1-201ENST00000371941 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
PREX1-201ENST00000371941 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
PREX1-201ENST00000371941 TTC39AQ5SRH9 613 aa16.14■□□□□ 0.18
PREX1-201ENST00000371941 FAM177A1Q8N128 213 aaPredicted RBP16.14■□□□□ 0.18
PREX1-201ENST00000371941 MPRIPQ6WCQ1 1025 aa16.14■□□□□ 0.17
PREX1-201ENST00000371941 PSMA5P28066 241 aa16.14■□□□□ 0.17
PREX1-201ENST00000371941 CABP4P57796 275 aa16.14■□□□□ 0.17
PREX1-201ENST00000371941 C16orf71Q8IYS4 520 aaPredicted RBP16.14■□□□□ 0.17
PREX1-201ENST00000371941 CYP46A1Q9Y6A2 500 aa16.14■□□□□ 0.17
PREX1-201ENST00000371941 TSR1Q2NL82 804 aaKnown RBP16.13■□□□□ 0.17
PREX1-201ENST00000371941 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
PREX1-201ENST00000371941 LARP1BQ659C4 914 aaKnown RBP16.13■□□□□ 0.17
PREX1-201ENST00000371941 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
PREX1-201ENST00000371941 CNNM1Q9NRU3 951 aa16.13■□□□□ 0.17
PREX1-201ENST00000371941 GUCY1B3Q02153 619 aa16.13■□□□□ 0.17
PREX1-201ENST00000371941 CCDC8Q9H0W5 538 aaPredicted RBP16.13■□□□□ 0.17
PREX1-201ENST00000371941 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
PREX1-201ENST00000371941 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
PREX1-201ENST00000371941 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 SKIDA1Q1XH10 827 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 RLBP1P12271 317 aa16.12■□□□□ 0.17
PREX1-201ENST00000371941 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
PREX1-201ENST00000371941 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
PREX1-201ENST00000371941 UGGT2Q9NYU1 1516 aa16.11■□□□□ 0.17
PREX1-201ENST00000371941 PTCD1O75127 700 aaKnown RBP16.11■□□□□ 0.17
PREX1-201ENST00000371941 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
PREX1-201ENST00000371941 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
PREX1-201ENST00000371941 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
PREX1-201ENST00000371941 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
PREX1-201ENST00000371941 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
PREX1-201ENST00000371941 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
PREX1-201ENST00000371941 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
PREX1-201ENST00000371941 PATL2C9JE40 543 aaKnown RBP16.1■□□□□ 0.17
PREX1-201ENST00000371941 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
PREX1-201ENST00000371941 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
PREX1-201ENST00000371941 DTNBO60941 627 aa16.1■□□□□ 0.17
PREX1-201ENST00000371941 ME1P48163 572 aa16.1■□□□□ 0.17
PREX1-201ENST00000371941 NUTM2AQ8IVF1 878 aaPredicted RBP16.1■□□□□ 0.17
PREX1-201ENST00000371941 TNMDQ9H2S6 317 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms