RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 SYCP2Q9BX26 1530 aa10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 VWDEQ8N2E2 1590 aa10.81□□□□□ -0.68
SMARCA1-203ENST00000371123 LMOD2Q6P5Q4 547 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 K7ELQ4 463 aaPredicted RBP10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.685e-7■■■□□ 15.5
SMARCA1-203ENST00000371123 GBP4Q96PP9 640 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 MROH2AA6NES4 1674 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 ARHGAP5Q13017 1502 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 HMOX1P09601 288 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 TRIM27P14373 513 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 CFAP53Q96M91 514 aa10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 RWDD1Q9H446 243 aaPredicted RBP10.8□□□□□ -0.68
SMARCA1-203ENST00000371123 SYCE3A1L190 88 aa10.79□□□□□ -0.68
SMARCA1-203ENST00000371123 HDAC1Q13547 482 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-203ENST00000371123 MROH1Q8NDA8 1641 aa10.79□□□□□ -0.68
SMARCA1-203ENST00000371123 RNF214Q8ND24 703 aa10.79□□□□□ -0.68
SMARCA1-203ENST00000371123 A0A0G2JS52 829 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 AP5Z1O43299 807 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 MAPK8IP2Q13387 824 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 SLC4A10Q6U841 1118 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 MINK1Q8N4C8 1332 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 ADAMTSL3P82987 1691 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 NUCB1Q02818 461 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 TBC1D9Q6ZT07 1266 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 UNC13BO14795 1591 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 ZC3H13Q5T200 1668 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 IPO4Q8TEX9 1081 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 GTPBP4Q9BZE4 634 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 KNDC1Q76NI1 1749 aa10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 KDM5AP29375 1690 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-203ENST00000371123 ATP7AQ04656 1500 aa10.77□□□□□ -0.68
SMARCA1-203ENST00000371123 KIF20AO95235 890 aa10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 IRX5P78411 483 aaPredicted RBP10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 CABP2Q9NPB3 220 aa10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 ADGRL1O94910 1474 aa10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 PRPF40AO75400 957 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 ANKRD45Q5TZF3 282 aa10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 NAA30Q147X3 362 aaPredicted RBP10.77□□□□□ -0.69
SMARCA1-203ENST00000371123 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 TCHHQ07283 1943 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 DTNBO60941 627 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 ZBTB40Q9NUA8 1239 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 LRSAM1Q6UWE0 723 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 PTMAP06454 111 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 GSPT1P15170 499 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 ANKRD7Q92527 254 aa10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 LTV1Q96GA3 475 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-203ENST00000371123 CLTCL1P53675 1640 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 MTHFSP49914 203 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 TMEM57Q8N5G2 664 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 PPIP5K1Q6PFW1 1433 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 CAPN2P17655 700 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 MTERF4Q7Z6M4 381 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 KCNF1Q9H3M0 494 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 CCDC9Q9Y3X0 531 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 NOS1P29475 1434 aa10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 CGNQ9P2M7 1197 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-203ENST00000371123 LETM1O95202 739 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 SLFN14P0C7P3 912 aa10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 ADGRB2O60241 1585 aa10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 SSH1Q8WYL5 1049 aa10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 KANK1Q14678 1352 aa10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 CDCA8Q53HL2 280 aa10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 DZIP1LQ8IYY4 767 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-203ENST00000371123 POLR3AO14802 1390 aaPredicted RBP10.73□□□□□ -0.69
SMARCA1-203ENST00000371123 TRAPPC8Q9Y2L5 1435 aa10.73□□□□□ -0.69
SMARCA1-203ENST00000371123 LMTK2Q8IWU2 1503 aa10.73□□□□□ -0.69
SMARCA1-203ENST00000371123 SMARCA5O60264 1052 aaPredicted RBP10.73□□□□□ -0.69
SMARCA1-203ENST00000371123 MCM5P33992 734 aa10.73□□□□□ -0.69
SMARCA1-203ENST00000371123 NOLC1Q14978 699 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMARCA1-203ENST00000371123 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 SPTLC3Q9NUV7 552 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 GADD45BO75293 160 aaPredicted RBP10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 PAXIP1Q6ZW49 1069 aaPredicted RBP10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 SPHKAPQ2M3C7 1700 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 IQGAP3Q86VI3 1631 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 CSPP1Q1MSJ5 1256 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 CHD1LQ86WJ1 897 aa10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 NOB1Q9ULX3 412 aaKnown RBP10.72□□□□□ -0.69
SMARCA1-203ENST00000371123 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
SMARCA1-203ENST00000371123 CHMP3Q9Y3E7 222 aa10.71□□□□□ -0.69
SMARCA1-203ENST00000371123 KIF16BQ96L93 1317 aa10.71□□□□□ -0.69
SMARCA1-203ENST00000371123 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
SMARCA1-203ENST00000371123 BMP2KLQ5H9B9 411 aa10.71□□□□□ -0.69
SMARCA1-203ENST00000371123 CCDC39Q9UFE4 941 aa10.71□□□□□ -0.69
SMARCA1-203ENST00000371123 DUOX2Q9NRD8 1548 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms