RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
LRRC40-201ENST00000370952 ATAD2Q6PL18 1390 aa11.89□□□□□ -0.51
LRRC40-201ENST00000370952 PPRC1Q5VV67 1664 aaKnown RBP11.89□□□□□ -0.51
LRRC40-201ENST00000370952 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 ALDH1L2Q3SY69 923 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 SASS6Q6UVJ0 657 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 LRSAM1Q6UWE0 723 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 USP32Q8NFA0 1604 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 TSPYL6Q8N831 410 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 IL16Q14005 1332 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 ZFYVE16Q7Z3T8 1539 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
LRRC40-201ENST00000370952 MED14O60244 1454 aa11.87□□□□□ -0.51
LRRC40-201ENST00000370952 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
LRRC40-201ENST00000370952 PTMAP06454 111 aaKnown RBP11.87□□□□□ -0.51
LRRC40-201ENST00000370952 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
LRRC40-201ENST00000370952 USP26Q9BXU7 913 aa11.87□□□□□ -0.51
LRRC40-201ENST00000370952 CCDC39Q9UFE4 941 aa11.87□□□□□ -0.51
LRRC40-201ENST00000370952 APBB1O00213 710 aa11.87□□□□□ -0.51
LRRC40-201ENST00000370952 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
LRRC40-201ENST00000370952 SMAP1Q8IYB5 467 aaPredicted RBP11.87□□□□□ -0.51
LRRC40-201ENST00000370952 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
LRRC40-201ENST00000370952 ANKRD36BQ8N2N9 1353 aa11.86□□□□□ -0.51
LRRC40-201ENST00000370952 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
LRRC40-201ENST00000370952 MRPL50Q8N5N7 158 aaKnown RBP11.86□□□□□ -0.51
LRRC40-201ENST00000370952 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
LRRC40-201ENST00000370952 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
LRRC40-201ENST00000370952 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
LRRC40-201ENST00000370952 ZNF830Q96NB3 372 aaPredicted RBP11.85□□□□□ -0.51
LRRC40-201ENST00000370952 C14orf93Q9H972 538 aaKnown RBP11.85□□□□□ -0.51
LRRC40-201ENST00000370952 NRXN1Q9ULB1 1477 aa11.85□□□□□ -0.51
LRRC40-201ENST00000370952 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
LRRC40-201ENST00000370952 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
LRRC40-201ENST00000370952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
LRRC40-201ENST00000370952 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 COL3A1P02461 1466 aaPredicted RBP11.84□□□□□ -0.51
LRRC40-201ENST00000370952 VAMP4O75379 141 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 FBLN1P23142 703 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 MCM5P33992 734 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 NSD2O96028 1365 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 ST18O60284 1047 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 DIAPH1O60610 1272 aaKnown RBP11.84□□□□□ -0.51
LRRC40-201ENST00000370952 MTERF4Q7Z6M4 381 aaKnown RBP11.84□□□□□ -0.51
LRRC40-201ENST00000370952 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
LRRC40-201ENST00000370952 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
LRRC40-201ENST00000370952 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 SMARCA5O60264 1052 aaPredicted RBP11.83□□□□□ -0.52
LRRC40-201ENST00000370952 TULP4Q9NRJ4 1543 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 VWDEQ8N2E2 1590 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 SETBP1Q9Y6X0 1596 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 PRKAR2BP31323 418 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
LRRC40-201ENST00000370952 NOL8Q76FK4 1167 aaKnown RBP11.83□□□□□ -0.52
LRRC40-201ENST00000370952 C17orf53Q8N3J3 647 aaPredicted RBP11.83□□□□□ -0.52
LRRC40-201ENST00000370952 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
LRRC40-201ENST00000370952 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
LRRC40-201ENST00000370952 CCDC94Q9BW85 323 aaPredicted RBP11.82□□□□□ -0.52
LRRC40-201ENST00000370952 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
LRRC40-201ENST00000370952 NEURL4Q96JN8 1562 aa11.82□□□□□ -0.52
LRRC40-201ENST00000370952 HMOX1P09601 288 aa11.82□□□□□ -0.52
LRRC40-201ENST00000370952 SDSP20132 328 aa11.82□□□□□ -0.52
LRRC40-201ENST00000370952 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 FYB1O15117 783 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 CBX1P83916 185 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
LRRC40-201ENST00000370952 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 ABCC4O15439 1325 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 STK26Q9P289 416 aa11.81□□□□□ -0.52
LRRC40-201ENST00000370952 MROH1Q8NDA8 1641 aa11.8□□□□□ -0.52
LRRC40-201ENST00000370952 TCHHQ07283 1943 aa11.8□□□□□ -0.52
LRRC40-201ENST00000370952 PIK3R4Q99570 1358 aa11.8□□□□□ -0.52
LRRC40-201ENST00000370952 MYRIPQ8NFW9 859 aa11.8□□□□□ -0.52
LRRC40-201ENST00000370952 DCTPP1Q9H773 170 aa11.8□□□□□ -0.52
LRRC40-201ENST00000370952 EFCAB6Q5THR3 1501 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 LRRC7Q96NW7 1537 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 MBD3O95983 291 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
LRRC40-201ENST00000370952 NEK4P51957 841 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
LRRC40-201ENST00000370952 ARHGAP45Q92619 1136 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 TTC12Q9H892 705 aaPredicted RBP11.79□□□□□ -0.52
LRRC40-201ENST00000370952 PPLO60437 1756 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 GADD45BO75293 160 aaPredicted RBP11.79□□□□□ -0.52
LRRC40-201ENST00000370952 DMTNQ08495 405 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
LRRC40-201ENST00000370952 C8orf58Q8NAV2 365 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
LRRC40-201ENST00000370952 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
LRRC40-201ENST00000370952 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
LRRC40-201ENST00000370952 GLI2P10070 1586 aa11.78□□□□□ -0.52
LRRC40-201ENST00000370952 REREQ9P2R6 1566 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms