RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 BARGINQ6ZT62 677 aa28.75■■■□□ 2.19
SMNDC1-201ENST00000369592 KRT27Q7Z3Y8 459 aa28.75■■■□□ 2.19
SMNDC1-201ENST00000369592 BLMP54132 1417 aaPredicted RBP28.74■■■□□ 2.19
SMNDC1-201ENST00000369592 CRB1P82279 1406 aa28.71■■■□□ 2.19
SMNDC1-201ENST00000369592 LTN1O94822 1766 aa28.7■■■□□ 2.19
SMNDC1-201ENST00000369592 EIF4G2P78344 907 aaKnown RBP eCLIP28.69■■■□□ 2.18
SMNDC1-201ENST00000369592 TCP11L2Q8N4U5 519 aa28.69■■■□□ 2.18
SMNDC1-201ENST00000369592 THRAP3Q9Y2W1 955 aaKnown RBP28.69■■■□□ 2.18
SMNDC1-201ENST00000369592 HSPA5P11021 654 aaKnown RBP28.68■■■□□ 2.18
SMNDC1-201ENST00000369592 DEFB132Q7Z7B7 95 aa28.68■■■□□ 2.18
SMNDC1-201ENST00000369592 WDR17Q8IZU2 1322 aa28.68■■■□□ 2.18
SMNDC1-201ENST00000369592 SOX12O15370 315 aa28.67■■■□□ 2.18
SMNDC1-201ENST00000369592 PARP4Q9UKK3 1724 aaKnown RBP28.66■■■□□ 2.18
SMNDC1-201ENST00000369592 LRP5O75197 1615 aa28.66■■■□□ 2.18
SMNDC1-201ENST00000369592 ZBTB7CA1YPR0 619 aa28.66■■■□□ 2.18
SMNDC1-201ENST00000369592 USP35Q9P2H5 1018 aa28.65■■■□□ 2.18
SMNDC1-201ENST00000369592 FYB1O15117 783 aa28.64■■■□□ 2.18
SMNDC1-201ENST00000369592 CARD14Q9BXL6 1004 aa28.64■■■□□ 2.18
SMNDC1-201ENST00000369592 A0A0G2JS52 829 aa28.63■■■□□ 2.17
SMNDC1-201ENST00000369592 MYT1Q01538 1121 aa28.63■■■□□ 2.17
SMNDC1-201ENST00000369592 WNK3Q9BYP7 1800 aa28.63■■■□□ 2.17
SMNDC1-201ENST00000369592 SF3B2Q13435 895 aaKnown RBP28.61■■■□□ 2.17
SMNDC1-201ENST00000369592 KIF20BQ96Q89 1820 aa28.6■■■□□ 2.17
SMNDC1-201ENST00000369592 COG3Q96JB2 828 aa28.59■■■□□ 2.17
SMNDC1-201ENST00000369592 CARD10Q9BWT7 1032 aa28.59■■■□□ 2.17
SMNDC1-201ENST00000369592 TOM1L2Q6ZVM7 507 aa28.58■■■□□ 2.17
SMNDC1-201ENST00000369592 FAM182BQ5T319 152 aa28.57■■■□□ 2.16
SMNDC1-201ENST00000369592 ERBB3P21860 1342 aa28.57■■■□□ 2.16
SMNDC1-201ENST00000369592 DISP2A7MBM2 1401 aa28.57■■■□□ 2.16
SMNDC1-201ENST00000369592 LRRC37A3O60309 1634 aa28.56■■■□□ 2.16
SMNDC1-201ENST00000369592 C11orf95C9JLR9 678 aaPredicted RBP28.55■■■□□ 2.16
SMNDC1-201ENST00000369592 IP6K1Q92551 441 aa28.55■■■□□ 2.16
SMNDC1-201ENST00000369592 NSD3Q9BZ95 1437 aa28.54■■■□□ 2.16
SMNDC1-201ENST00000369592 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
SMNDC1-201ENST00000369592 GGNBP2Q9H3C7 697 aa28.54■■■□□ 2.16
SMNDC1-201ENST00000369592 RGPD1P0DJD0 1748 aa28.54■■■□□ 2.16
SMNDC1-201ENST00000369592 PEAK1Q9H792 1746 aa28.54■■■□□ 2.16
SMNDC1-201ENST00000369592 TNS1Q9HBL0 1735 aaKnown RBP28.53■■■□□ 2.16
SMNDC1-201ENST00000369592 FBLN1P23142 703 aa28.53■■■□□ 2.16
SMNDC1-201ENST00000369592 CCDC7Q96M83 1385 aa28.51■■■□□ 2.16
SMNDC1-201ENST00000369592 PSDA5PKW4 1024 aaPredicted RBP28.51■■■□□ 2.15
SMNDC1-201ENST00000369592 FAM196AQ6ZSG2 479 aa28.51■■■□□ 2.15
SMNDC1-201ENST00000369592 CDCA7Q9BWT1 371 aaPredicted RBP28.5■■■□□ 2.15
SMNDC1-201ENST00000369592 CSB-PGBD3P0DP91 1061 aa28.49■■■□□ 2.15
SMNDC1-201ENST00000369592 PDE3BQ13370 1112 aa28.49■■■□□ 2.15
SMNDC1-201ENST00000369592 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
SMNDC1-201ENST00000369592 FAM208AQ9UK61 1670 aaKnown RBP28.48■■■□□ 2.15
SMNDC1-201ENST00000369592 HOXC9P31274 260 aa28.47■■■□□ 2.15
SMNDC1-201ENST00000369592 RTL1A6NKG5 1358 aa28.47■■■□□ 2.15
SMNDC1-201ENST00000369592 SBF2Q86WG5 1849 aa28.45■■■□□ 2.14
SMNDC1-201ENST00000369592 DDB1Q16531 1140 aa28.44■■■□□ 2.14
SMNDC1-201ENST00000369592 BCL9O00512 1426 aa28.43■■■□□ 2.14
SMNDC1-201ENST00000369592 RRS1Q15050 365 aaKnown RBP28.43■■■□□ 2.14
SMNDC1-201ENST00000369592 KIF24Q5T7B8 1368 aa28.42■■■□□ 2.14
SMNDC1-201ENST00000369592 BAG6P46379 1132 aa28.42■■■□□ 2.14
SMNDC1-201ENST00000369592 NLRP2Q9NX02 1062 aa28.42■■■□□ 2.14
SMNDC1-201ENST00000369592 ANKRD26Q9UPS8 1709 aa28.42■■■□□ 2.14
SMNDC1-201ENST00000369592 RGPD2P0DJD1 1756 aa28.42■■■□□ 2.14
SMNDC1-201ENST00000369592 CGNL1Q0VF96 1302 aa28.42■■■□□ 2.14
SMNDC1-201ENST00000369592 MARCH10Q8NA82 808 aaPredicted RBP28.41■■■□□ 2.14
SMNDC1-201ENST00000369592 OVOS2A0A0G2JMS6 1433 aa28.41■■■□□ 2.14
SMNDC1-201ENST00000369592 TRIM37O94972 964 aa28.4■■■□□ 2.14
SMNDC1-201ENST00000369592 AMPHP49418 695 aa28.4■■■□□ 2.14
SMNDC1-201ENST00000369592 POLR3GLQ9BT43 218 aa28.4■■■□□ 2.14
SMNDC1-201ENST00000369592 PANK3Q9H999 370 aa28.4■■■□□ 2.14
SMNDC1-201ENST00000369592 TNS2Q63HR2 1409 aa28.39■■■□□ 2.14
SMNDC1-201ENST00000369592 KIF7Q2M1P5 1343 aa28.39■■■□□ 2.13
SMNDC1-201ENST00000369592 MAP2P11137 1827 aaKnown RBP28.37■■■□□ 2.13
SMNDC1-201ENST00000369592 INSRP06213 1382 aa28.37■■■□□ 2.13
SMNDC1-201ENST00000369592 EXOC5O00471 708 aa28.35■■■□□ 2.13
SMNDC1-201ENST00000369592 IL2RBP14784 551 aa28.35■■■□□ 2.13
SMNDC1-201ENST00000369592 EN1Q05925 392 aaPredicted RBP28.35■■■□□ 2.13
SMNDC1-201ENST00000369592 CAMKK2Q96RR4 588 aa28.35■■■□□ 2.13
SMNDC1-201ENST00000369592 FLT4P35916 1363 aa28.35■■■□□ 2.13
SMNDC1-201ENST00000369592 LTV1Q96GA3 475 aaPredicted RBP28.34■■■□□ 2.13
SMNDC1-201ENST00000369592 HSP90AB2PQ58FF8 381 aa28.33■■■□□ 2.13
SMNDC1-201ENST00000369592 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
SMNDC1-201ENST00000369592 RREB1Q92766 1687 aa28.3■■■□□ 2.12
SMNDC1-201ENST00000369592 NSD2O96028 1365 aa28.3■■■□□ 2.12
SMNDC1-201ENST00000369592 PARD3Q8TEW0 1356 aa28.3■■■□□ 2.12
SMNDC1-201ENST00000369592 NBPF6Q5VWK0 638 aa28.3■■■□□ 2.12
SMNDC1-201ENST00000369592 NBPF4Q96M43 638 aa28.3■■■□□ 2.12
SMNDC1-201ENST00000369592 APBA3O96018 575 aa28.29■■■□□ 2.12
SMNDC1-201ENST00000369592 R3HDM1Q15032 1099 aaKnown RBP28.29■■■□□ 2.12
SMNDC1-201ENST00000369592 RGPD3A6NKT7 1758 aaPredicted RBP28.29■■■□□ 2.12
SMNDC1-201ENST00000369592 RGPD4Q7Z3J3 1758 aa28.29■■■□□ 2.12
SMNDC1-201ENST00000369592 EZH2Q15910 746 aaKnown RBP28.28■■■□□ 2.12
SMNDC1-201ENST00000369592 PTF1AQ7RTS3 328 aa28.28■■■□□ 2.12
SMNDC1-201ENST00000369592 POLKQ9UBT6 870 aa28.28■■■□□ 2.12
SMNDC1-201ENST00000369592 SHANK3Q9BYB0 1731 aa28.28■■■□□ 2.12
SMNDC1-201ENST00000369592 NCAPD2Q15021 1401 aa28.27■■■□□ 2.12
SMNDC1-201ENST00000369592 WASHC2AQ641Q2 1341 aa28.27■■■□□ 2.12
SMNDC1-201ENST00000369592 BCL11BQ9C0K0 894 aaPredicted RBP28.26■■■□□ 2.11
SMNDC1-201ENST00000369592 MEGF6O75095 1541 aa28.26■■■□□ 2.11
SMNDC1-201ENST00000369592 PER1O15534 1290 aaPredicted RBP28.24■■■□□ 2.11
SMNDC1-201ENST00000369592 AMER1Q5JTC6 1135 aaPredicted RBP28.24■■■□□ 2.11
SMNDC1-201ENST00000369592 SMG6Q86US8 1419 aaKnown RBP28.24■■■□□ 2.11
SMNDC1-201ENST00000369592 NHSQ6T4R5 1651 aa28.23■■■□□ 2.11
SMNDC1-201ENST00000369592 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
SMNDC1-201ENST00000369592 PLSCR1O15162 318 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 334 ms